Guide to the Human Genome
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Name: TTLL4 Sequence: fasta or formatted (1199aa) NCBI GI: 217330594
Description:

tubulin tyrosine ligase-like family, member 4

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         68           3
 C cysteine            1.9         23           2
 D aspartate           4.5         54           2
 E glutamate           5.2         62           4
 F phenylalanine       3.7         44           2
 G glycine             4.9         59           2
 H histidine           2.3         28           2
 I isoleucine          4.3         52           2
 K lysine              6.7         80           2
 L leucine             9.3        111           3
 M methionine          1.9         23           1
 N asparagine          3.3         40           3
 P proline             7.7         92           2
 Q glutamine           4.8         58           2
 R arginine            5.0         60           2
 S serine             14.2        170           3
 T threonine           5.0         60           2
 V valine              5.1         61           3
 W tryptophan          1.8         22           1
 Y tyrosine            2.7         32           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin tyrosine ligase-like family, member 4 [Homo... 
TTLL5                 0.115   tubulin tyrosine ligase-like family, member 5 
TTLL6                 0.082   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL2                 0.074   tubulin tyrosine ligase-like family, member 2 
TTLL7                 0.073   tubulin tyrosine ligase-like family, member 7 
TTLL13                0.072   tubulin tyrosine ligase-like family, member 13 [Homo...
TTLL1                 0.063   tubulin tyrosine ligase-like family, member 1 
TTLL11                0.058   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL11                0.045   tubulin tyrosine ligase-like family, member 11 b [Ho...
TTLL9                 0.045   tubulin tyrosine ligase-like family, member 9 
TTLL3                 0.030   tubulin tyrosine ligase-like family, member 3 [Homo...
TTLL10                0.028   tubulin tyrosine ligase-like family, member 10 isof...
TTLL8                 0.028   tubulin tyrosine ligase-like family, member 8 [Homo...
TTL                   0.026   tubulin tyrosine ligase 
TTLL6                 0.021   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL10                0.017   tubulin tyrosine ligase-like family, member 10 isof...
SETD1A                0.010   SET domain containing 1A 
TTLL12                0.009   tubulin tyrosine ligase-like family, member 12 [Homo...
CCDC82                0.007   coiled-coil domain containing 82 
MUC4                  0.007   mucin 4 isoform a 
LOC100128719          0.006   PREDICTED: hypothetical protein, partial 
LOC100128719          0.006   PREDICTED: hypothetical protein, partial 
NRD1                  0.005   nardilysin isoform b 
DAXX                  0.005   death-domain associated protein isoform a 
DAXX                  0.005   death-domain associated protein isoform a 
DAXX                  0.005   death-domain associated protein isoform b 
UBTF                  0.005   upstream binding transcription factor, RNA polymera...
UBTF                  0.005   upstream binding transcription factor, RNA polymera...
UBTF                  0.005   upstream binding transcription factor, RNA polymerase...
SETD1B                0.005   SET domain containing 1B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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