Guide to the Human Genome
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Name: FIZ1 Sequence: fasta or formatted (496aa) NCBI GI: 170932550
Description:

FLT3-interacting zinc finger 1

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.1         70           7
 C cysteine            5.8         29           2
 D aspartate           2.8         14           2
 E glutamate           6.7         33           2
 F phenylalanine       4.0         20           2
 G glycine            12.7         63           3
 H histidine           6.0         30           2
 I isoleucine          0.6          3           1
 K lysine              3.8         19           2
 L leucine             9.3         46           3
 M methionine          0.4          2           1
 N asparagine          1.0          5           1
 P proline             9.5         47           2
 Q glutamine           1.2          6           1
 R arginine            7.7         38           2
 S serine              6.2         31           2
 T threonine           3.2         16           1
 V valine              2.8         14           2
 W tryptophan          0.6          3           1
 Y tyrosine            1.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FLT3-interacting zinc finger 1 
ZNF836                0.211   zinc finger protein 836 
ZNF160                0.198   zinc finger protein 160 
ZNF160                0.198   zinc finger protein 160 
ZNF160                0.198   zinc finger protein 160 
ZNF229                0.195   zinc finger protein 229 
ZNF226                0.193   zinc finger protein 226 isoform a 
ZNF226                0.193   zinc finger protein 226 isoform a 
ZNF628                0.187   zinc finger protein 628 
ZNF235                0.182   zinc finger protein 93 homolog 
ZNF676                0.182   zinc finger protein 676 
ZNF16                 0.179   zinc finger protein 16 
ZNF16                 0.179   zinc finger protein 16 
ZNF497                0.179   zinc finger protein 497 
ZNF345                0.177   zinc finger protein 345 
LOC647678             0.172   PREDICTED: similar to zinc finger protein 347 [Homo...
ZNF502                0.172   zinc finger protein 502 
ZNF502                0.172   zinc finger protein 502 
ZNF502                0.172   zinc finger protein 502 
ZNF502                0.172   zinc finger protein 502 
ZNF418                0.172   zinc finger protein 418 
ZNF66                 0.170   PREDICTED: zinc finger protein 66 
ZNF66                 0.170   PREDICTED: zinc finger protein 66 
ZNF66                 0.170   PREDICTED: zinc finger protein 66 
ZNF48                 0.169   zinc finger protein 48 
ZSCAN2                0.165   zinc finger protein 29 isoform 1 
ZNF441                0.165   zinc finger protein 441 
ZNF728                0.164   PREDICTED: zinc finger protein 728 
ZNF728                0.164   PREDICTED: zinc finger protein 728 
ZNF728                0.164   PREDICTED: zinc finger protein 728 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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