Guide to the Human Genome
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Name: TTLL1 Sequence: fasta or formatted (423aa) NCBI GI: 11068135
Description:

tubulin tyrosine ligase-like family, member 1

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         16           1
 C cysteine            1.7          7           1
 D aspartate           5.7         24           2
 E glutamate           6.4         27           2
 F phenylalanine       3.5         15           1
 G glycine             5.7         24           2
 H histidine           1.9          8           1
 I isoleucine          6.1         26           3
 K lysine              8.5         36           2
 L leucine             9.2         39           2
 M methionine          1.9          8           1
 N asparagine          6.6         28           2
 P proline             4.0         17           2
 Q glutamine           2.6         11           1
 R arginine            5.4         23           1
 S serine              7.6         32           2
 T threonine           4.7         20           2
 V valine              6.9         29           1
 W tryptophan          2.6         11           1
 Y tyrosine            5.2         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin tyrosine ligase-like family, member 1 
TTLL9                 0.308   tubulin tyrosine ligase-like family, member 9 
TTLL2                 0.208   tubulin tyrosine ligase-like family, member 2 
TTLL5                 0.194   tubulin tyrosine ligase-like family, member 5 
TTLL6                 0.189   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL4                 0.179   tubulin tyrosine ligase-like family, member 4 [Homo...
TTLL13                0.179   tubulin tyrosine ligase-like family, member 13 [Homo...
TTLL7                 0.138   tubulin tyrosine ligase-like family, member 7 
TTLL11                0.115   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL3                 0.104   tubulin tyrosine ligase-like family, member 3 [Homo...
TTLL8                 0.096   tubulin tyrosine ligase-like family, member 8 [Homo...
TTLL10                0.095   tubulin tyrosine ligase-like family, member 10 isof...
TTLL11                0.088   tubulin tyrosine ligase-like family, member 11 b [Ho...
TTL                   0.073   tubulin tyrosine ligase 
TTLL10                0.066   tubulin tyrosine ligase-like family, member 10 isof...
TTLL6                 0.045   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL12                0.028   tubulin tyrosine ligase-like family, member 12 [Homo...
SACS                  0.006   sacsin 
NRD1                  0.006   nardilysin isoform b 
NRD1                  0.006   nardilysin isoform a 
WDR65                 0.005   WD repeat domain 65 
GBP2                  0.005   guanylate binding protein 2, interferon-inducible [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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