Guide to the Human Genome
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Name: TTLL2 Sequence: fasta or formatted (592aa) NCBI GI: 99028883
Description:

tubulin tyrosine ligase-like family, member 2

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         35           2
 C cysteine            1.9         11           1
 D aspartate           5.6         33           2
 E glutamate           5.1         30           1
 F phenylalanine       4.6         27           2
 G glycine             5.2         31           2
 H histidine           3.0         18           2
 I isoleucine          4.6         27           2
 K lysine              6.8         40           4
 L leucine            10.8         64           3
 M methionine          2.4         14           1
 N asparagine          4.7         28           2
 P proline             5.9         35           2
 Q glutamine           3.9         23           2
 R arginine            5.9         35           2
 S serine              7.9         47           2
 T threonine           5.9         35           3
 V valine              5.1         30           2
 W tryptophan          1.5          9           1
 Y tyrosine            3.4         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin tyrosine ligase-like family, member 2 
TTLL5                 0.173   tubulin tyrosine ligase-like family, member 5 
TTLL1                 0.149   tubulin tyrosine ligase-like family, member 1 
TTLL4                 0.149   tubulin tyrosine ligase-like family, member 4 [Homo...
TTLL6                 0.142   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL13                0.140   tubulin tyrosine ligase-like family, member 13 [Homo...
TTLL7                 0.136   tubulin tyrosine ligase-like family, member 7 
TTLL9                 0.109   tubulin tyrosine ligase-like family, member 9 
TTLL11                0.095   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL11                0.072   tubulin tyrosine ligase-like family, member 11 b [Ho...
TTL                   0.067   tubulin tyrosine ligase 
TTLL3                 0.066   tubulin tyrosine ligase-like family, member 3 [Homo...
TTLL8                 0.062   tubulin tyrosine ligase-like family, member 8 [Homo...
TTLL10                0.056   tubulin tyrosine ligase-like family, member 10 isof...
TTLL12                0.045   tubulin tyrosine ligase-like family, member 12 [Homo...
TTLL6                 0.040   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL10                0.024   tubulin tyrosine ligase-like family, member 10 isof...
KIAA1543              0.012   NEZHA isoform 2 
KIAA1543              0.012   NEZHA isoform 1 
ITGA8                 0.007   integrin, alpha 8 
SOX6                  0.006   SRY (sex determining region Y)-box 6 isoform 4 [Hom...
SOX6                  0.006   SRY (sex determining region Y)-box 6 isoform 3 [Hom...
SOX6                  0.006   SRY (sex determining region Y)-box 6 isoform 1 [Homo...
SOX6                  0.006   SRY (sex determining region Y)-box 6 isoform 2 [Homo...
TTN                   0.006   titin isoform N2-A 
ZNF335                0.006   zinc finger protein 335 
LOC729350             0.005   PREDICTED: hypothetical protein 
LOC729350             0.005   PREDICTED: hypothetical protein 
LOC729350             0.005   PREDICTED: hypothetical protein 
LOC100289984          0.004   PREDICTED: hypothetical protein XP_002347489 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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