Guide to the Human Genome
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Name: TTLL5 Sequence: fasta or formatted (1281aa) NCBI GI: 50658079
Description:

tubulin tyrosine ligase-like family, member 5

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         92           2
 C cysteine            1.3         17           2
 D aspartate           3.5         45           2
 E glutamate           7.3         93           5
 F phenylalanine       3.0         39           1
 G glycine             4.8         61           2
 H histidine           3.0         39           2
 I isoleucine          4.9         63           2
 K lysine              6.0         77           3
 L leucine             9.1        117           2
 M methionine          2.3         30           1
 N asparagine          4.9         63           4
 P proline             5.9         76           3
 Q glutamine           5.4         69           3
 R arginine            5.9         76           4
 S serine             10.8        138           3
 T threonine           5.8         74           2
 V valine              4.8         62           2
 W tryptophan          0.9         11           1
 Y tyrosine            3.0         39           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin tyrosine ligase-like family, member 5 
TTLL4                 0.109   tubulin tyrosine ligase-like family, member 4 [Homo...
TTLL2                 0.081   tubulin tyrosine ligase-like family, member 2 
TTLL13                0.080   tubulin tyrosine ligase-like family, member 13 [Homo...
TTLL7                 0.075   tubulin tyrosine ligase-like family, member 7 
TTLL6                 0.074   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL1                 0.065   tubulin tyrosine ligase-like family, member 1 
TTLL11                0.054   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL9                 0.047   tubulin tyrosine ligase-like family, member 9 
TTLL11                0.043   tubulin tyrosine ligase-like family, member 11 b [Ho...
TTLL3                 0.034   tubulin tyrosine ligase-like family, member 3 [Homo...
TTLL8                 0.032   tubulin tyrosine ligase-like family, member 8 [Homo...
TTLL10                0.029   tubulin tyrosine ligase-like family, member 10 isof...
TTL                   0.025   tubulin tyrosine ligase 
TTLL6                 0.022   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL10                0.020   tubulin tyrosine ligase-like family, member 10 isof...
TTLL12                0.012   tubulin tyrosine ligase-like family, member 12 [Homo...
MUC16                 0.008   mucin 16 
RPGRIP1L              0.007   RPGRIP1-like isoform b 
RPGRIP1L              0.007   RPGRIP1-like isoform a 
TOP2A                 0.007   DNA topoisomerase II, alpha isozyme 
MLL2                  0.007   myeloid/lymphoid or mixed-lineage leukemia 2 
MUC6                  0.007   mucin 6, gastric 
UBAP2L                0.007   ubiquitin associated protein 2-like isoform a [Homo...
UBAP2L                0.007   ubiquitin associated protein 2-like isoform b [Homo...
ACIN1                 0.006   apoptotic chromatin condensation inducer 1 
NUP214                0.006   nucleoporin 214kDa 
HDAC4                 0.006   histone deacetylase 4 
MUC4                  0.006   mucin 4 isoform a 
MNS1                  0.006   meiosis-specific nuclear structural 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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