Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TTLL11 Sequence: fasta or formatted (538aa) NCBI GI: 89363028
Description:

tubulin tyrosine ligase-like family, member 11 b

Referenced in:

Tubulins and Microtubules

Other entries for this name:
alt prot [800aa] tubulin tyrosine ligase-like family, member 11 a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         57           6
 C cysteine            1.9         10           1
 D aspartate           4.8         26           3
 E glutamate           4.6         25           2
 F phenylalanine       3.3         18           1
 G glycine             8.2         44           3
 H histidine           1.7          9           1
 I isoleucine          4.8         26           2
 K lysine              5.9         32           2
 L leucine             8.7         47           2
 M methionine          1.5          8           1
 N asparagine          2.2         12           1
 P proline             7.8         42           3
 Q glutamine           3.7         20           1
 R arginine            6.3         34           2
 S serine              8.9         48           2
 T threonine           5.0         27           1
 V valine              6.3         34           2
 W tryptophan          1.7          9           1
 Y tyrosine            1.9         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin tyrosine ligase-like family, member 11 b [Ho... 
TTLL11                0.956   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL13                0.156   tubulin tyrosine ligase-like family, member 13 [Homo...
TTLL6                 0.148   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL7                 0.138   tubulin tyrosine ligase-like family, member 7 
TTLL5                 0.102   tubulin tyrosine ligase-like family, member 5 
TTLL4                 0.101   tubulin tyrosine ligase-like family, member 4 [Homo...
TTLL2                 0.080   tubulin tyrosine ligase-like family, member 2 
TTLL1                 0.071   tubulin tyrosine ligase-like family, member 1 
TTL                   0.040   tubulin tyrosine ligase 
TTLL3                 0.030   tubulin tyrosine ligase-like family, member 3 [Homo...
LBXCOR1               0.025   LBXCOR1 homolog 
TTLL9                 0.025   tubulin tyrosine ligase-like family, member 9 
FIZ1                  0.021   FLT3-interacting zinc finger 1 
TTLL10                0.021   tubulin tyrosine ligase-like family, member 10 isof...
TTLL10                0.021   tubulin tyrosine ligase-like family, member 10 isof...
SLC12A2               0.018   solute carrier family 12 (sodium/potassium/chloride t...
TRIO                  0.018   triple functional domain (PTPRF interacting) 
TTLL12                0.018   tubulin tyrosine ligase-like family, member 12 [Homo...
POU3F3                0.017   POU class 3 homeobox 3 
TTLL8                 0.016   tubulin tyrosine ligase-like family, member 8 [Homo...
MEX3D                 0.015   ring finger and KH domain containing 1 
AMOT                  0.015   angiomotin isoform 2 
AMOT                  0.015   angiomotin isoform 1 
LOC728503             0.014   PREDICTED: hypothetical protein 
LOC728503             0.014   PREDICTED: hypothetical protein 
LOC728503             0.014   PREDICTED: hypothetical protein 
HOXA13                0.014   homeobox A13 
FAM48B1               0.014   hypothetical protein LOC100130302 
TBC1D10B              0.013   TBC1 domain family, member 10B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press