Guide to the Human Genome
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Name: TTLL7 Sequence: fasta or formatted (887aa) NCBI GI: 94536793
Description:

tubulin tyrosine ligase-like family, member 7

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         30           2
 C cysteine            1.8         16           2
 D aspartate           5.0         44           2
 E glutamate           7.1         63           2
 F phenylalanine       3.5         31           2
 G glycine             4.3         38           1
 H histidine           2.1         19           1
 I isoleucine          5.3         47           2
 K lysine              8.7         77           5
 L leucine             9.9         88           2
 M methionine          2.4         21           1
 N asparagine          4.8         43           2
 P proline             5.2         46           2
 Q glutamine           5.2         46           2
 R arginine            7.1         63           2
 S serine              9.2         82           6
 T threonine           4.8         43           2
 V valine              5.0         44           2
 W tryptophan          1.5         13           1
 Y tyrosine            3.7         33           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin tyrosine ligase-like family, member 7 
TTLL6                 0.196   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL13                0.184   tubulin tyrosine ligase-like family, member 13 [Homo...
TTLL5                 0.108   tubulin tyrosine ligase-like family, member 5 
TTLL11                0.102   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL4                 0.099   tubulin tyrosine ligase-like family, member 4 [Homo...
TTLL2                 0.091   tubulin tyrosine ligase-like family, member 2 
TTLL11                0.082   tubulin tyrosine ligase-like family, member 11 b [Ho...
TTLL1                 0.066   tubulin tyrosine ligase-like family, member 1 
TTLL6                 0.065   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL9                 0.058   tubulin tyrosine ligase-like family, member 9 
TTLL3                 0.037   tubulin tyrosine ligase-like family, member 3 [Homo...
TTL                   0.033   tubulin tyrosine ligase 
TTLL10                0.028   tubulin tyrosine ligase-like family, member 10 isof...
TTLL8                 0.027   tubulin tyrosine ligase-like family, member 8 [Homo...
TTLL10                0.015   tubulin tyrosine ligase-like family, member 10 isof...
TTLL12                0.014   tubulin tyrosine ligase-like family, member 12 [Homo...
FAM133A               0.011   hypothetical protein LOC286499 
MAP4K4                0.010   mitogen-activated protein kinase kinase kinase kinas...
KIF5C                 0.009   kinesin family member 5C 
NOLC1                 0.008   nucleolar and coiled-body phosphoprotein 1 
CDC2L2                0.008   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.008   cell division cycle 2-like 2 isoform 1 
KIF21A                0.008   kinesin family member 21A 
CALD1                 0.008   caldesmon 1 isoform 3 
CALD1                 0.008   caldesmon 1 isoform 2 
CALD1                 0.008   caldesmon 1 isoform 1 
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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