Guide to the Human Genome
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Name: TTLL12 Sequence: fasta or formatted (644aa) NCBI GI: 11056036
Description:

tubulin tyrosine ligase-like family, member 12

Referenced in:

Tubulins and Microtubules

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         45           2
 C cysteine            2.2         14           1
 D aspartate           5.4         35           2
 E glutamate           9.0         58           4
 F phenylalanine       5.9         38           2
 G glycine             4.5         29           2
 H histidine           3.7         24           1
 I isoleucine          3.4         22           2
 K lysine              3.6         23           1
 L leucine             9.8         63           2
 M methionine          2.2         14           1
 N asparagine          3.1         20           1
 P proline             7.8         50           3
 Q glutamine           4.8         31           2
 R arginine            6.5         42           2
 S serine              4.3         28           2
 T threonine           4.5         29           1
 V valine              7.1         46           2
 W tryptophan          2.0         13           1
 Y tyrosine            3.1         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tubulin tyrosine ligase-like family, member 12 [Homo... 
TTLL2                 0.040   tubulin tyrosine ligase-like family, member 2 
TTLL5                 0.023   tubulin tyrosine ligase-like family, member 5 
TTLL13                0.022   tubulin tyrosine ligase-like family, member 13 [Homo...
TTLL6                 0.020   tubulin tyrosine ligase-like family, member 6 isofo...
TTLL7                 0.019   tubulin tyrosine ligase-like family, member 7 
TTLL1                 0.018   tubulin tyrosine ligase-like family, member 1 
TTLL3                 0.018   tubulin tyrosine ligase-like family, member 3 [Homo...
TTLL4                 0.016   tubulin tyrosine ligase-like family, member 4 [Homo...
TTLL8                 0.014   tubulin tyrosine ligase-like family, member 8 [Homo...
TTLL11                0.014   tubulin tyrosine ligase-like family, member 11 a [H...
TTLL11                0.014   tubulin tyrosine ligase-like family, member 11 b [Ho...
G3BP2                 0.005   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.005   Ras-GTPase activating protein SH3 domain-binding pro...
G3BP2                 0.005   Ras-GTPase activating protein SH3 domain-binding pro...
ZNF326                0.005   zinc finger protein 326 isoform 1 
LRRC7                 0.004   leucine rich repeat containing 7 
GTF3C3                0.004   general transcription factor IIIC, polypeptide 3, 102...
PDZRN4                0.004   PDZ domain containing RING finger 4 
EPHA6                 0.004   EPH receptor A6 isoform a 
MICAL3                0.004   microtubule associated monoxygenase, calponin and L...
PLEKHH3               0.004   pleckstrin homology domain containing, family H (wit...
LOC123855             0.004   PREDICTED: similar to hCG2042536 
LOC123855             0.004   PREDICTED: similar to hCG2042536 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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