LOC401180 36753

Name: LOC401180	Sequence: fasta or formatted (320aa)		NCBI GI: 88987622
Description: PREDICTED: similar to hCG1745223		Not currently referenced in the text
Other entries for this name: alt mRNA {320aa} PREDICTED: similar to hCG1745223 alt prot {319aa} PREDICTED: similar to hCG1745223
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.9 38 3 C cysteine 1.9 6 1 D aspartate 2.5 8 1 E glutamate 3.8 12 2 F phenylalanine 0.6 2 1 G glycine 9.4 30 4 H histidine 1.2 4 1 I isoleucine 2.2 7 1 K lysine 5.6 18 4 L leucine 8.1 26 2 M methionine 1.9 6 1 N asparagine 0.9 3 1 P proline 15.6 50 5 Q glutamine 4.7 15 1 R arginine 9.1 29 2 S serine 9.7 31 3 T threonine 5.9 19 2 V valine 4.1 13 1 W tryptophan 0.6 2 1 Y tyrosine 0.3 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to hCG1745223 LOC401180 1.000 PREDICTED: similar to hCG1745223 LOC401180 0.990 PREDICTED: similar to hCG1745223 NACA 0.064 nascent polypeptide-associated complex alpha subuni... WIPF1 0.056 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.056 WAS/WASL interacting protein family, member 1 MUPCDH 0.048 mucin and cadherin-like isoform 1 WIPF2 0.048 WIRE protein PRB2 0.046 proline-rich protein BstNI subfamily 2 SMTN 0.046 smoothelin isoform a CASKIN1 0.045 CASK interacting protein 1 PRB1 0.045 proline-rich protein BstNI subfamily 1 isoform 1 pre... DIAPH1 0.040 diaphanous 1 isoform 2 DIAPH1 0.040 diaphanous 1 isoform 1 BCL9L 0.040 B-cell CLL/lymphoma 9-like SMTN 0.040 smoothelin isoform b SMTN 0.040 smoothelin isoform c FLJ22184 0.040 PREDICTED: hypothetical protein FLJ22184 FLJ22184 0.040 PREDICTED: hypothetical protein LOC80164 LOC100293375 0.038 PREDICTED: hypothetical protein FLJ22184 0.038 PREDICTED: hypothetical protein FLJ22184 LOC643355 0.038 PREDICTED: hypothetical protein LOC643355 0.038 PREDICTED: hypothetical protein TAF4 0.037 TBP-associated factor 4 PRG4 0.037 proteoglycan 4 isoform D PRG4 0.037 proteoglycan 4 isoform C PRG4 0.037 proteoglycan 4 isoform B PRG4 0.037 proteoglycan 4 isoform A LOC100130882 0.035 PREDICTED: hypothetical protein LOC100130882 0.035 PREDICTED: hypothetical protein Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.