Guide to the Human Genome
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Name: NRIP3 Sequence: fasta or formatted (241aa) NCBI GI: 11034819
Description:

nuclear receptor interacting protein 3

Referenced in:

Nuclear Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         12           2
 C cysteine            2.5          6           1
 D aspartate           6.6         16           2
 E glutamate           7.1         17           2
 F phenylalanine       1.2          3           1
 G glycine             6.2         15           2
 H histidine           3.3          8           1
 I isoleucine          4.1         10           2
 K lysine             10.0         24           2
 L leucine            14.9         36           2
 M methionine          2.9          7           1
 N asparagine          4.1         10           1
 P proline             2.9          7           1
 Q glutamine           4.1         10           2
 R arginine            5.8         14           2
 S serine              7.9         19           2
 T threonine           4.1         10           1
 V valine              5.8         14           2
 W tryptophan          0.4          1           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nuclear receptor interacting protein 3 
NRIP2                 0.274   nuclear receptor interacting protein 2 
DDI1                  0.073   DDI1, DNA-damage inducible 1, homolog 1 
DDI2                  0.064   DNA-damage inducible protein 2 
KIAA1377              0.013   hypothetical protein LOC57562 
DHTKD1                0.011   dehydrogenase E1 and transketolase domain containing...
PCNT                  0.009   pericentrin 
SCRIB                 0.009   scribble isoform b 
SCRIB                 0.009   scribble isoform a 
FAM169A               0.007   hypothetical protein LOC26049 
NUP214                0.007   nucleoporin 214kDa 
NUAK2                 0.007   NUAK family, SNF1-like kinase, 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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