Guide to the Human Genome
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Name: TSPAN14 Sequence: fasta or formatted (270aa) NCBI GI: 190194420
Description:

tetraspanin 14 isoform 1

Referenced in:

Integrins

Other entries for this name:
alt prot [147aa] tetraspanin 14 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         18           1
 C cysteine            4.4         12           2
 D aspartate           5.2         14           2
 E glutamate           3.7         10           1
 F phenylalanine       7.8         21           2
 G glycine             7.0         19           1
 H histidine           1.5          4           2
 I isoleucine          7.4         20           2
 K lysine              4.4         12           1
 L leucine            10.7         29           2
 M methionine          1.5          4           1
 N asparagine          4.1         11           1
 P proline             2.2          6           1
 Q glutamine           3.3          9           1
 R arginine            4.1         11           1
 S serine              6.3         17           1
 T threonine           2.6          7           1
 V valine              9.6         26           2
 W tryptophan          3.0          8           1
 Y tyrosine            4.4         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tetraspanin 14 isoform 1 
TSPAN5                0.583   transmembrane 4 superfamily member 9 
TSPAN17               0.577   transmembrane 4 superfamily member 17 isoform b [Hom...
TSPAN17               0.566   transmembrane 4 superfamily member 17 isoform a [Hom...
TSPAN17               0.542   transmembrane 4 superfamily member 17 isoform c [Hom...
TSPAN14               0.432   tetraspanin 14 isoform 2 
TSPAN33               0.367   tetraspanin 33 
TSPAN15               0.246   transmembrane 4 superfamily member 15 
TSPAN10               0.210   tetraspanin 10 
CD63                  0.160   CD63 antigen isoform A 
TSPAN4                0.158   tetraspanin 4 isoform a 
TSPAN4                0.158   tetraspanin 4 isoform a 
TSPAN4                0.158   tetraspanin 4 isoform a 
TSPAN4                0.158   tetraspanin 4 isoform a 
TSPAN4                0.158   tetraspanin 4 isoform a 
TSPAN4                0.158   tetraspanin 4 isoform a 
TSPAN9                0.156   tetraspanin 9 
CD63                  0.149   CD63 antigen isoform B 
TSPAN18               0.147   tetraspanin 18 isoform 2 
TSPAN6                0.140   transmembrane 4 superfamily member 6 
TSPAN7                0.138   tetraspanin 7 
TSPAN18               0.138   tetraspanin 18 isoform 1 
CD82                  0.134   CD82 antigen isoform 1 
CD151                 0.134   CD151 antigen 
CD151                 0.134   CD151 antigen 
CD151                 0.134   CD151 antigen 
CD151                 0.134   CD151 antigen 
TSPAN11               0.132   tetraspanin 11 
CD37                  0.128   CD37 antigen isoform A 
CD9                   0.127   CD9 antigen 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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