Guide to the Human Genome
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Search of human proteins with 82617546

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|82617546 cyclic nucleotide gated channel alpha 4 [Homo
sapiens]
         (575 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|82617546 cyclic nucleotide gated channel alpha 4 [Homo sapiens]   1155   0.0  
gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Ho...   598   e-171
gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2 [...   598   e-171
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [...   596   e-170
gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [H...   596   e-170
gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens]    593   e-169
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H...   267   2e-71
gi|116642889 cyclic nucleotide gated channel beta 3 [Homo sapiens]    245   9e-65
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p...   170   3e-42
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...   169   8e-42
gi|38327037 hyperpolarization activated cyclic nucleotide-gated ...   163   3e-40
gi|116325989 hyperpolarization activated cyclic nucleotide-gated...   158   1e-38
gi|27886653 potassium voltage-gated channel, subfamily H, member...   144   2e-34
gi|13540549 potassium voltage-gated channel, subfamily H, member...   137   3e-32
gi|4504831 potassium voltage-gated channel, subfamily H, member ...   136   5e-32
gi|26051273 voltage-gated potassium channel, subfamily H, member...   133   4e-31
gi|4557729 voltage-gated potassium channel, subfamily H, member ...   133   4e-31
gi|27886667 potassium voltage-gated channel, subfamily H, member...   133   5e-31
gi|22024390 potassium voltage-gated channel, subfamily H, member...   132   7e-31
gi|27886648 potassium voltage-gated channel, subfamily H, member...   132   7e-31
gi|6912446 potassium voltage-gated channel, subfamily H, member ...   132   1e-30
gi|27437001 potassium voltage-gated channel, subfamily H, member...   127   4e-29
gi|38569493 potassium voltage-gated channel, subfamily H (eag-re...   126   6e-29
gi|27886651 potassium voltage-gated channel, subfamily H, member...   121   2e-27
gi|26051271 voltage-gated potassium channel, subfamily H, member...   117   2e-26
gi|27886646 potassium voltage-gated channel, subfamily H, member...   114   2e-25
gi|27886665 potassium voltage-gated channel, subfamily H, member...    87   3e-17
gi|148612818 protein kinase, cGMP-dependent, type I isoform 1 [H...    46   8e-05
gi|10835242 protein kinase, cGMP-dependent, type I isoform 2 [Ho...    46   8e-05
gi|5453978 protein kinase, cGMP-dependent, type II [Homo sapiens]      44   4e-04

>gi|82617546 cyclic nucleotide gated channel alpha 4 [Homo sapiens]
          Length = 575

 Score = 1155 bits (2989), Expect = 0.0
 Identities = 575/575 (100%), Positives = 575/575 (100%)

Query: 1   MSQDTKVKTTESSPPAPSKARKLLPVLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPD 60
           MSQDTKVKTTESSPPAPSKARKLLPVLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPD
Sbjct: 1   MSQDTKVKTTESSPPAPSKARKLLPVLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPD 60

Query: 61  LQHGYLVAWLVLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLA 120
           LQHGYLVAWLVLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLA
Sbjct: 61  LQHGYLVAWLVLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLA 120

Query: 121 SLMPTDVVYVRLGPHTPTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVI 180
           SLMPTDVVYVRLGPHTPTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVI
Sbjct: 121 SLMPTDVVYVRLGPHTPTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVI 180

Query: 181 HWNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAR 240
           HWNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAR
Sbjct: 181 HWNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAR 240

Query: 241 EEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLE 300
           EEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLE
Sbjct: 241 EEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLE 300

Query: 301 RRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEEL 360
           RRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEEL
Sbjct: 301 RRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEEL 360

Query: 361 VLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIIN 420
           VLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIIN
Sbjct: 361 VLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIIN 420

Query: 421 IKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDV 480
           IKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDV
Sbjct: 421 IKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDV 480

Query: 481 NAEAAEIALQEATESRLRGLDQQLDDLQTKFARLLAELESSALKIAYRIERLEWQTREWP 540
           NAEAAEIALQEATESRLRGLDQQLDDLQTKFARLLAELESSALKIAYRIERLEWQTREWP
Sbjct: 481 NAEAAEIALQEATESRLRGLDQQLDDLQTKFARLLAELESSALKIAYRIERLEWQTREWP 540

Query: 541 MPEDLAEADDEGEPEEGTSKDEEGRASQEGPPGPE 575
           MPEDLAEADDEGEPEEGTSKDEEGRASQEGPPGPE
Sbjct: 541 MPEDLAEADDEGEPEEGTSKDEEGRASQEGPPGPE 575


>gi|4502917 cyclic nucleotide gated channel alpha 3 isoform 1 [Homo
           sapiens]
          Length = 694

 Score =  598 bits (1543), Expect = e-171
 Identities = 290/551 (52%), Positives = 402/551 (72%), Gaps = 9/551 (1%)

Query: 9   TTESSPPAPSKARKLLPVLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVA 68
           T+ ++       +K   V+DPS + YY WL  +  PV YN  +L+CRACF +LQ  YL+ 
Sbjct: 143 TSNNTEEEKKTKKKDAIVVDPSSNLYYRWLTAIALPVFYNWYLLICRACFDELQSEYLML 202

Query: 69  WLVLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVV 128
           WLVLDY++D+LY+LD++VR  TGFLEQG++V D  R+   Y  T  F LD+ SL+PTD+ 
Sbjct: 203 WLVLDYSADVLYVLDVLVRARTGFLEQGLMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLA 262

Query: 129 YVRLGPHTPTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYF 188
           Y+++G + P +R NR L+  RLFE FDRTETRT YPN FRI  L+LYI ++IHWN+C+YF
Sbjct: 263 YLKVGTNYPEVRFNRLLKFSRLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYF 322

Query: 189 ALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAREEEYLFMV 248
           A+S+++GFG D+WVYP+ + P   RL R+Y+YS Y+STL LTT+G+TPPP ++EEYLF+V
Sbjct: 323 AISKFIGFGTDSWVYPNISIPEHGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVV 382

Query: 249 GDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDWYQ 308
            DFL+ V+ FATI+G++ S+I NMN + A F      +K+YM+ + V + LE RVI W+ 
Sbjct: 383 VDFLVGVLIFATIVGNVGSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFD 442

Query: 309 HLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQT 368
           +L  NKK  +E  +L+ LP++L+AE+A++VHL TL +V+IFQ+CEA LL ELVLKL+P  
Sbjct: 443 YLWANKKTVDEKEVLKSLPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTV 502

Query: 369 YSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNMSGN 428
           +SPG+Y+C+KGDIG+EMYII EG+LAVVADDG+TQ+ VL  G YFGEISI+NIKG+ SGN
Sbjct: 503 FSPGDYICKKGDIGKEMYIINEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKSGN 562

Query: 429 RRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDVNAEAAEIA 488
           RRTANI+S+GYSDLFCLSK+DL E L+EYP+A+  +EEKGR+IL+K N +D     A  A
Sbjct: 563 RRTANIRSIGYSDLFCLSKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELARAG-A 621

Query: 489 LQEATESRLRGLDQQLDDLQTKFARLLAELESSALKIAYRIERLEWQTR--------EWP 540
             +  E ++  L   LD LQT+FARLLAE  ++ +K+  R+ +LE Q +        +  
Sbjct: 622 DPKDLEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQVKGGGDKPLADGE 681

Query: 541 MPEDLAEADDE 551
           +P D  + +D+
Sbjct: 682 VPGDATKTEDK 692


>gi|120433600 cyclic nucleotide gated channel alpha 3 isoform 2
           [Homo sapiens]
          Length = 676

 Score =  598 bits (1542), Expect = e-171
 Identities = 288/534 (53%), Positives = 396/534 (74%), Gaps = 9/534 (1%)

Query: 26  VLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMV 85
           V+DPS + YY WL  +  PV YN  +L+CRACF +LQ  YL+ WLVLDY++D+LY+LD++
Sbjct: 142 VVDPSSNLYYRWLTAIALPVFYNWYLLICRACFDELQSEYLMLWLVLDYSADVLYVLDVL 201

Query: 86  VRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYVRLGPHTPTLRLNRFL 145
           VR  TGFLEQG++V D  R+   Y  T  F LD+ SL+PTD+ Y+++G + P +R NR L
Sbjct: 202 VRARTGFLEQGLMVSDTNRLWQHYKTTTQFKLDVLSLVPTDLAYLKVGTNYPEVRFNRLL 261

Query: 146 RAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWVYPD 205
           +  RLFE FDRTETRT YPN FRI  L+LYI ++IHWN+C+YFA+S+++GFG D+WVYP+
Sbjct: 262 KFSRLFEFFDRTETRTNYPNMFRIGNLVLYILIIIHWNACIYFAISKFIGFGTDSWVYPN 321

Query: 206 PAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAREEEYLFMVGDFLLAVMGFATIMGSM 265
            + P   RL R+Y+YS Y+STL LTT+G+TPPP ++EEYLF+V DFL+ V+ FATI+G++
Sbjct: 322 ISIPEHGRLSRKYIYSLYWSTLTLTTIGETPPPVKDEEYLFVVVDFLVGVLIFATIVGNV 381

Query: 266 SSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQH 325
            S+I NMN + A F      +K+YM+ + V + LE RVI W+ +L  NKK  +E  +L+ 
Sbjct: 382 GSMISNMNASRAEFQAKIDSIKQYMQFRKVTKDLETRVIRWFDYLWANKKTVDEKEVLKS 441

Query: 326 LPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEM 385
           LP++L+AE+A++VHL TL +V+IFQ+CEA LL ELVLKL+P  +SPG+Y+C+KGDIG+EM
Sbjct: 442 LPDKLKAEIAINVHLDTLKKVRIFQDCEAGLLVELVLKLRPTVFSPGDYICKKGDIGKEM 501

Query: 386 YIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCL 445
           YII EG+LAVVADDG+TQ+ VL  G YFGEISI+NIKG+ SGNRRTANI+S+GYSDLFCL
Sbjct: 502 YIINEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSKSGNRRTANIRSIGYSDLFCL 561

Query: 446 SKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDVNAEAAEIALQEATESRLRGLDQQLD 505
           SK+DL E L+EYP+A+  +EEKGR+IL+K N +D     A  A  +  E ++  L   LD
Sbjct: 562 SKDDLMEALTEYPEAKKALEEKGRQILMKDNLIDEELARAG-ADPKDLEEKVEQLGSSLD 620

Query: 506 DLQTKFARLLAELESSALKIAYRIERLEWQTR--------EWPMPEDLAEADDE 551
            LQT+FARLLAE  ++ +K+  R+ +LE Q +        +  +P D  + +D+
Sbjct: 621 TLQTRFARLLAEYNATQMKMKQRLSQLESQVKGGGDKPLADGEVPGDATKTEDK 674


>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
           [Homo sapiens]
          Length = 759

 Score =  596 bits (1537), Expect = e-170
 Identities = 285/528 (53%), Positives = 398/528 (75%), Gaps = 1/528 (0%)

Query: 6   KVKTTESSPPAPSKARKLLPVLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGY 65
           K K  E S     + +K + V+DPSG+ YY WL  +  PVMYN  +++ RACF +LQ  Y
Sbjct: 206 KKKKEEKSKDKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDY 265

Query: 66  LVAWLVLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLASLMPT 125
           L  WL+LDY SD++YL+DM VR  TG+LEQG+LV ++ ++ ++Y     F LD+ SL+PT
Sbjct: 266 LEYWLILDYVSDIVYLIDMFVRTRTGYLEQGLLVKEELKLINKYKSNLQFKLDVLSLIPT 325

Query: 126 DVVYVRLGPHTPTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSC 185
           D++Y +LG + P +RLNR LR  R+FE F RTETRT YPN FRI+ L++YI ++IHWN+C
Sbjct: 326 DLLYFKLGWNYPEIRLNRLLRFSRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNAC 385

Query: 186 LYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAREEEYL 245
           +++++S+ +GFG D WVYPD   P F RL R+Y+YS Y+STL LTT+G+TPPP R+ EY+
Sbjct: 386 VFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYV 445

Query: 246 FMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVID 305
           F+V DFL+ V+ FATI+G++ S+I NMN A A F      +K+YM  ++V++ +E+RVI 
Sbjct: 446 FVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIK 505

Query: 306 WYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQ 365
           W+ +L  NKK  +E  +L++LP++LRAE+A++VHL TL +V+IF +CEA LL ELVLKLQ
Sbjct: 506 WFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQ 565

Query: 366 PQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNM 425
           PQ YSPG+Y+C+KGDIG+EMYII+EG+LAVVADDG+TQ+ VL  G YFGEISI+NIKG+ 
Sbjct: 566 PQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSK 625

Query: 426 SGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDVNAEAA 485
           +GNRRTANIKS+GYSDLFCLSK+DL E L+EYP A+T++EEKG++IL+K   LD+N   A
Sbjct: 626 AGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGKQILMKDGLLDLNIANA 685

Query: 486 EIALQEATESRLRGLDQQLDDLQTKFARLLAELESSALKIAYRIERLE 533
               ++  E ++  ++  +D LQT+FAR+LAE ES   K+  R+ ++E
Sbjct: 686 GSDPKD-LEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVE 732


>gi|71143141 cyclic nucleotide gated channel alpha 1 isoform 2 [Homo
           sapiens]
          Length = 690

 Score =  596 bits (1537), Expect = e-170
 Identities = 285/528 (53%), Positives = 398/528 (75%), Gaps = 1/528 (0%)

Query: 6   KVKTTESSPPAPSKARKLLPVLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGY 65
           K K  E S     + +K + V+DPSG+ YY WL  +  PVMYN  +++ RACF +LQ  Y
Sbjct: 137 KKKKEEKSKDKKEEEKKEVVVIDPSGNTYYNWLFCITLPVMYNWTMVIARACFDELQSDY 196

Query: 66  LVAWLVLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLASLMPT 125
           L  WL+LDY SD++YL+DM VR  TG+LEQG+LV ++ ++ ++Y     F LD+ SL+PT
Sbjct: 197 LEYWLILDYVSDIVYLIDMFVRTRTGYLEQGLLVKEELKLINKYKSNLQFKLDVLSLIPT 256

Query: 126 DVVYVRLGPHTPTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSC 185
           D++Y +LG + P +RLNR LR  R+FE F RTETRT YPN FRI+ L++YI ++IHWN+C
Sbjct: 257 DLLYFKLGWNYPEIRLNRLLRFSRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNAC 316

Query: 186 LYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAREEEYL 245
           +++++S+ +GFG D WVYPD   P F RL R+Y+YS Y+STL LTT+G+TPPP R+ EY+
Sbjct: 317 VFYSISKAIGFGNDTWVYPDINDPEFGRLARKYVYSLYWSTLTLTTIGETPPPVRDSEYV 376

Query: 246 FMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVID 305
           F+V DFL+ V+ FATI+G++ S+I NMN A A F      +K+YM  ++V++ +E+RVI 
Sbjct: 377 FVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQYMHFRNVSKDMEKRVIK 436

Query: 306 WYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQ 365
           W+ +L  NKK  +E  +L++LP++LRAE+A++VHL TL +V+IF +CEA LL ELVLKLQ
Sbjct: 437 WFDYLWTNKKTVDEKEVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQ 496

Query: 366 PQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNM 425
           PQ YSPG+Y+C+KGDIG+EMYII+EG+LAVVADDG+TQ+ VL  G YFGEISI+NIKG+ 
Sbjct: 497 PQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILNIKGSK 556

Query: 426 SGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDVNAEAA 485
           +GNRRTANIKS+GYSDLFCLSK+DL E L+EYP A+T++EEKG++IL+K   LD+N   A
Sbjct: 557 AGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGKQILMKDGLLDLNIANA 616

Query: 486 EIALQEATESRLRGLDQQLDDLQTKFARLLAELESSALKIAYRIERLE 533
               ++  E ++  ++  +D LQT+FAR+LAE ES   K+  R+ ++E
Sbjct: 617 GSDPKD-LEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLTKVE 663


>gi|42718011 cyclic nucleotide gated channel alpha 2 [Homo sapiens]
          Length = 664

 Score =  593 bits (1528), Expect = e-169
 Identities = 291/540 (53%), Positives = 395/540 (73%), Gaps = 8/540 (1%)

Query: 18  SKARKLLPVLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSD 77
           +K +  L VLDP+GD+YY WL  +  PV+YN  +LV RACF DLQ GY + WLVLDY SD
Sbjct: 124 TKKKFELFVLDPAGDWYYCWLFVIAMPVLYNWCLLVARACFSDLQKGYYLVWLVLDYVSD 183

Query: 78  LLYLLDMVVRFHTGFLEQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYVRLGPHTP 137
           ++Y+ D+ +R  TGFLEQG+LV D  ++   Y+ T  F LD+AS++PTD++Y  +  H+P
Sbjct: 184 VVYIADLFIRLRTGFLEQGLLVKDTKKLRDNYIHTLQFKLDVASIIPTDLIYFAVDIHSP 243

Query: 138 TLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFG 197
            +R NR L   R+FE FDRTETRT YPN FRI+ L+LYI V+IHWN+C+Y+A+S+ +GFG
Sbjct: 244 EVRFNRLLHFARMFEFFDRTETRTNYPNIFRISNLVLYILVIIHWNACIYYAISKSIGFG 303

Query: 198 RDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAREEEYLFMVGDFLLAVMG 257
            D WVYP+   P +  L R+Y+Y  Y+STL LTT+G+TPPP ++EEYLF++ DFL+ V+ 
Sbjct: 304 VDTWVYPNITDPEYGYLAREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLI 363

Query: 258 FATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMT 317
           FATI+G++ S+I NMN   A F      VK YM+ + V++ +E +VI W+ +L  NKK  
Sbjct: 364 FATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKGMEAKVIRWFDYLWTNKKTV 423

Query: 318 NEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCR 377
           +E  IL++LP +LRAE+A++VHLSTL +V+IF +CEA LL ELVLKL+PQ +SPG+Y+CR
Sbjct: 424 DEREILKNLPAKLRAEIAINVHLSTLKKVRIFHDCEAGLLVELVLKLRPQVFSPGDYICR 483

Query: 378 KGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSL 437
           KGDIG+EMYII+EG+LAVVADDG+TQYA+L AG  FGEISI+NIKG+  GNRRTANI+SL
Sbjct: 484 KGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSL 543

Query: 438 GYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNKLDVN--AEAAEIALQEATES 495
           GYSDLFCLSK+DL E ++EYP A+ ++EE+GREIL+K   LD N  A + E+ +QE    
Sbjct: 544 GYSDLFCLSKDDLMEAVTEYPDAKKVLEERGREILMKEGLLDENEVATSMEVDVQE---- 599

Query: 496 RLRGLDQQLDDLQTKFARLLAELESSALKIAYRIERLEWQTREWPMPEDLAEADDEGEPE 555
           +L  L+  ++ L T+F RLLAE   +  K+  RI  LE + ++    ED   +D    PE
Sbjct: 600 KLGQLETNMETLYTRFGRLLAEYTGAQQKLKQRITVLETKMKQ--NNEDDYLSDGMNSPE 657


>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
            sapiens]
          Length = 1251

 Score =  267 bits (683), Expect = 2e-71
 Identities = 167/554 (30%), Positives = 281/554 (50%), Gaps = 26/554 (4%)

Query: 34   YYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMVVRFHTG-- 91
            Y  WL  +V    +N  ++  R  FP      +  WL++DY  DL+Y LD+ V F T   
Sbjct: 656  YVLWLFFVVMAWNWNCWLIPVRWAFPYQTPDNIHHWLLMDYLCDLIYFLDITV-FQTRLQ 714

Query: 92   FLEQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYVRLGPHTPTLRLNRFLRAPRLF 151
            F+  G ++ DK  + + Y+++  F +DL SL+P D +Y+++G + P LRL R L+    F
Sbjct: 715  FVRGGDIITDKKDMRNNYLKSRRFKMDLLSLLPLDFLYLKVGVN-PLLRLPRCLKYMAFF 773

Query: 152  EAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWVYPDPAQPGF 211
            E   R E+  +    +R+ +   Y+   +H NSCLY+  S Y G G   WVY        
Sbjct: 774  EFNSRLESILSKAYVYRVIRTTAYLLYSLHLNSCLYYWASAYQGLGSTHWVY-------- 825

Query: 212  ERLRRQYLYSFYFSTLILTTVGDTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYN 271
            + +   Y+  +YF+   L T+G  P P    E +F + ++   V  F+ ++G M  V+  
Sbjct: 826  DGVGNSYIRCYYFAVKTLITIGGLPDPKTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGA 885

Query: 272  MNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLR 331
                   +        KYM    + + ++ RV  WY++   ++ M +E  ++  LP+++R
Sbjct: 886  ATAGQTYYRSCMDSTVKYMNFYKIPKSVQNRVKTWYEYTWHSQGMLDESELMVQLPDKMR 945

Query: 332  AEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREG 391
             ++A+ V+ + +S+V +FQ C+  ++ +++ +L+   Y P +YVC+KG+IG+EMYII+ G
Sbjct: 946  LDLAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAG 1005

Query: 392  QLAVV-ADDGITQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDL 450
            Q+ V+   DG +    L AG  FGEIS++ + G   GNRRTAN+ + G+++LF L K+DL
Sbjct: 1006 QVQVLGGPDGKSVLVTLKAGSVFGEISLLAVGG---GNRRTANVVAHGFTNLFILDKKDL 1062

Query: 451  REVLSEYPQAQTIMEEKGREILLKMNKLDVNAEAAEIALQEATESRLRGLDQQLDDL--- 507
             E+L  YP++Q ++ +K R +L   NK         +  +  T             +   
Sbjct: 1063 NEILVHYPESQKLLRKKARRMLRSNNKPKEEKSVLILPPRAGTPKLFNAALAMTGKMGGK 1122

Query: 508  ---QTKFARLLAEL-ESSALKIAYRIERLEWQ---TREWPMPEDLAEADDEGEPEEGTSK 560
                 K A L A L E +AL+ A + + L  Q   +++    E  A  D    P+E  + 
Sbjct: 1123 GAKGGKLAHLRARLKELAALEAAAKQQELVEQAKSSQDVKGEEGSAAPDQHTHPKEAATD 1182

Query: 561  DEEGRASQEGPPGP 574
                R   E P  P
Sbjct: 1183 PPAPRTPPEPPGSP 1196


>gi|116642889 cyclic nucleotide gated channel beta 3 [Homo sapiens]
          Length = 809

 Score =  245 bits (625), Expect = 9e-65
 Identities = 154/544 (28%), Positives = 270/544 (49%), Gaps = 27/544 (4%)

Query: 34  YYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMV-VRFHTGF 92
           Y  WL  +     +N   +  R  FP      +  WL+ D   D++YL DM+ ++    F
Sbjct: 218 YLLWLLLVTLAYNWNCCFIPLRLVFPYQTADNIHYWLIADIICDIIYLYDMLFIQPRLQF 277

Query: 93  LEQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYVRLGPHTPTLRLNRFLRAPRLFE 152
           +  G ++VD   +   Y  +  F LD+AS++P D+ Y+  G   P  R NR L+    FE
Sbjct: 278 VRGGDIIVDSNELRKHYRTSTKFQLDVASIIPFDICYLFFG-FNPMFRANRMLKYTSFFE 336

Query: 153 AFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYFALSRYLGFGRDAWVYPDPAQPGFE 212
                E+       +R+ +   Y+  ++H N+C+Y+  S Y G G   WVY         
Sbjct: 337 FNHHLESIMDKAYIYRVIRTTGYLLFILHINACVYYWASNYEGIGTTRWVYDGEGN---- 392

Query: 213 RLRRQYLYSFYFSTLILTTVGDTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNM 272
               +YL  +Y++   L T+G  P P    E +F + +F   V  F++++G M  VI   
Sbjct: 393 ----EYLRCYYWAVRTLITIGGLPEPQTLFEIVFQLLNFFSGVFVFSSLIGQMRDVIGAA 448

Query: 273 NTADAAFYPDHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRA 332
                 F         YM    + + +++RV  WY++   +++M +E  +L+ LP  ++ 
Sbjct: 449 TANQNYFRACMDDTIAYMNNYSIPKLVQKRVRTWYEYTWDSQRMLDESDLLKTLPTTVQL 508

Query: 333 EVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQ 392
            +A+ V+ S +S+V +F+ C+  ++ +++L+L+   Y PG++VC+KG+IG+EMYII+ G+
Sbjct: 509 ALAIDVNFSIISKVDLFKGCDTQMIYDMLLRLKSVLYLPGDFVCKKGEIGKEMYIIKHGE 568

Query: 393 LAVV-ADDGITQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLR 451
           + V+   DG      L AG  FGEIS++   G   GNRRTAN+ + G+++L  L K+ L+
Sbjct: 569 VQVLGGPDGTKVLVTLKAGSVFGEISLLAAGG---GNRRTANVVAHGFANLLTLDKKTLQ 625

Query: 452 EVLSEYPQAQTIMEEKGREILLKMNKLDVNAEAAEIALQEATESRLRGLDQQLDDLQTKF 511
           E+L  YP ++ I+ +K R +LLK        + A+ A        L  L    ++    F
Sbjct: 626 EILVHYPDSERILMKKAR-VLLK--------QKAKTAEATPPRKDLALLFPPKEETPKLF 676

Query: 512 ARLLAELESSALKIAYRIERLEWQTREWPMPEDLAEADDEGEPEEGTSKDEEGRASQEGP 571
             LL     ++L    +++R +   ++    E+    ++EG+  E   K+ E +  +   
Sbjct: 677 KTLLGGTGKASLARLLKLKREQAAQKK----ENSEGGEEEGKENEDKQKENEDKQKENED 732

Query: 572 PGPE 575
            G E
Sbjct: 733 KGKE 736


>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 4 [Homo sapiens]
          Length = 1203

 Score =  170 bits (431), Expect = 3e-42
 Identities = 121/478 (25%), Positives = 229/478 (47%), Gaps = 41/478 (8%)

Query: 26  VLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMV 85
           ++ P  D+ ++W  TM+  ++ NLII+     F   +      W+V +  SD  +L+D+V
Sbjct: 254 IIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITF--FKDENTTPWIVFNVVSDTFFLIDLV 311

Query: 86  VRFHTGFL--EQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYV------------- 130
           + F TG +  +   +++D  RI  +Y+++W F +D  S +P D +++             
Sbjct: 312 LNFRTGIVVEDNTEIILDPQRIKMKYLKSW-FMVDFISSIPVDYIFLIVETRIDSEVYKT 370

Query: 131 ----RLGPHTPTLRLNRFLRAPRLFEAFDRTE-----TRTAYPNAFRIAKLMLYIFVVIH 181
               R+   T  L L R LR  RL     + E     T        RI  L+  + ++ H
Sbjct: 371 ARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCH 430

Query: 182 WNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFY--FSTLILTTVGDTPPPA 239
           W+ CL F +     F  D WV  +          +QY Y+ +   S ++    G   P  
Sbjct: 431 WDGCLQFLVPMLQDFPDDCWVSINNMVNN--SWGKQYSYALFKAMSHMLCIGYGRQAPVG 488

Query: 240 REEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKL 299
             + +L M+   ++    +A  +G  +++I +++++   +   +  V++YM    +    
Sbjct: 489 MSDVWLTMLS-MIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPPDT 547

Query: 300 ERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEE 359
            +R+ D+Y+H +   KM +E +IL  L E LR E+        ++ + +F N + + +  
Sbjct: 548 RQRIHDYYEH-RYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTS 606

Query: 360 LVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISII 419
           ++ KL+ + + PG+Y+ R+G IG++MY I+ G ++V+      +   L  G YFGEI + 
Sbjct: 607 MLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--NKETKLADGSYFGEICL- 663

Query: 420 NIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNK 477
                ++  RRTA++++  Y  L+ LS ++  EVL EYP  +   E    + L ++ K
Sbjct: 664 -----LTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGK 716


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score =  169 bits (427), Expect = 8e-42
 Identities = 122/480 (25%), Positives = 229/480 (47%), Gaps = 45/480 (9%)

Query: 26  VLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMV 85
           ++ P  D+ ++W  TM+  ++ NLII+     F   +      W+V +  SD  +L+D+V
Sbjct: 203 IIHPYSDFRFYWDFTMLLFMVGNLIIIPVGITF--FKDETTAPWIVFNVVSDTFFLMDLV 260

Query: 86  VRFHTGFL--EQGILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYV------------- 130
           + F TG +  +   +++D  +I  +Y+RTW F +D  S +P D +++             
Sbjct: 261 LNFRTGIVIEDNTEIILDPEKIKKKYLRTW-FVVDFVSSIPVDYIFLIVEKGIDSEVYKT 319

Query: 131 ----RLGPHTPTLRLNRFLRAPRLFEAFDRTE-----TRTAYPNAFRIAKLMLYIFVVIH 181
               R+   T  L L R LR  RL     + E     T        RI  L+  + ++ H
Sbjct: 320 ARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVMRICNLISMMLLLCH 379

Query: 182 WNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFYF----STLILTTVGDTPP 237
           W+ CL F +     F R+ WV  +    G        LYSF      S ++    G   P
Sbjct: 380 WDGCLQFLVPMLQDFPRNCWVSIN----GMVNHSWSELYSFALFKAMSHMLCIGYGRQAP 435

Query: 238 PAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNR 297
            +  + +L M+   ++    +A  +G  +++I +++++   +   +  V++YM    +  
Sbjct: 436 ESMTDIWLTMLS-MIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPA 494

Query: 298 KLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLL 357
              +++ D+Y+H +   KM +E +IL  L   LR E+        ++ + +F N + + +
Sbjct: 495 DFRQKIHDYYEH-RYQGKMFDEDSILGELNGPLREEIVNFNCRKLVASMPLFANADPNFV 553

Query: 358 EELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEIS 417
             ++ KL+ + + PG+Y+ R+G IG++MY I+ G ++V+      +   L  G YFGEI 
Sbjct: 554 TAMLTKLKFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKG--NKEMKLSDGSYFGEIC 611

Query: 418 IINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNK 477
           +      ++  RRTA++++  Y  L+ LS ++  EVL EYP  +   E    + L ++ K
Sbjct: 612 L------LTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGK 665


>gi|38327037 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 3 [Homo sapiens]
          Length = 774

 Score =  163 bits (413), Expect = 3e-40
 Identities = 125/480 (26%), Positives = 230/480 (47%), Gaps = 43/480 (8%)

Query: 26  VLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMV 85
           ++ P  D+ ++W   M+  ++ NLI+L     F   ++     W+V +  SD  +LLD+V
Sbjct: 85  IIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFFKEENS--PPWIVFNVLSDTFFLLDLV 142

Query: 86  VRFHTGFL-EQGILVVDKGR-ISSRYVRTWSFFLDLASLMPTDVVYV------------- 130
           + F TG + E+G  ++   R I +RY+RTW F +DL S +P D +++             
Sbjct: 143 LNFRTGIVVEEGAEILLAPRAIRTRYLRTW-FLVDLISSIPVDYIFLVVELEPRLDAEVY 201

Query: 131 ------RLGPHTPTLRLNRFLRAPRLFEAFDRTE-----TRTAYPNAFRIAKLMLYIFVV 179
                 R+   T  L L R LR  RL     + E     T        RI  L+  + ++
Sbjct: 202 KTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLL 261

Query: 180 IHWNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFY--FSTLILTTVGDTPP 237
            HW+ CL F +     F  D WV  +          RQY ++ +   S ++    G   P
Sbjct: 262 CHWDGCLQFLVPMLQDFPPDCWVSINHMVN--HSWGRQYSHALFKAMSHMLCIGYGQQAP 319

Query: 238 PAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNR 297
               + +L M+   ++    +A  +G  +++I +++++   +   +  V++YM    +  
Sbjct: 320 VGMPDVWLTMLS-MIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPA 378

Query: 298 KLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLL 357
              +R+ ++Y+H +   KM +E +IL  L E LR E+        ++ + +F + + S +
Sbjct: 379 DTRQRIHEYYEH-RYQGKMFDEESILGELSEPLREEIINFTCRGLVAHMPLFAHADPSFV 437

Query: 358 EELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEIS 417
             ++ KL+ + + PG+ V R+G +G++MY I+ G L+V+A     +   L  G YFGEI 
Sbjct: 438 TAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARG--ARDTRLTDGSYFGEIC 495

Query: 418 IINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEEKGREILLKMNK 477
           +      ++  RRTA++++  Y  L+ LS +    VL E+P  +   E    + LL++ K
Sbjct: 496 L------LTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVAMDRLLRIGK 549


>gi|116325989 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 1 [Homo sapiens]
          Length = 890

 Score =  158 bits (400), Expect = 1e-38
 Identities = 119/492 (24%), Positives = 233/492 (47%), Gaps = 51/492 (10%)

Query: 26  VLDPSGDYYYWWLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMV 85
           ++ P  D+ ++W   M+  ++ NL+I+     F   Q      W++ +  SD ++LLD++
Sbjct: 134 IIHPYSDFRFYWDLIMLIMMVGNLVIIPVGITFFTEQT--TTPWIIFNVASDTVFLLDLI 191

Query: 86  VRFHTGFLEQGI--LVVDKGRISSRYVRTWSFFLDLASLMPTDVVYV------------- 130
           + F TG + +    +++D   I   Y+++W F +D  S +P D +++             
Sbjct: 192 MNFRTGTVNEDSSEIILDPKVIKMNYLKSW-FVVDFISSIPVDYIFLIVEKGMDSEVYKT 250

Query: 131 ----RLGPHTPTLRLNRFLRAPRLFEAFDRTE-----TRTAYPNAFRIAKLMLYIFVVIH 181
               R+   T  L L R LR  RL     + E     T        RI  L+  + ++ H
Sbjct: 251 ARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCH 310

Query: 182 WNSCLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFY--FSTLILTTVGDTPPPA 239
           W+ CL F +     F  D WV  +      +   +QY Y+ +   S ++    G   P +
Sbjct: 311 WDGCLQFLVPLLQDFPPDCWVSLNEMVN--DSWGKQYSYALFKAMSHMLCIGYGAQAPVS 368

Query: 240 REEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKL 299
             + ++ M+   ++    +A  +G  +++I +++++   +   +  V++YM    +   +
Sbjct: 369 MSDLWITMLS-MIVGATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADM 427

Query: 300 ERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEE 359
            +++ D+Y+H +   K+ +E  IL  L + LR E+        ++ + +F N + + +  
Sbjct: 428 RQKIHDYYEH-RYQGKIFDEENILNELNDPLREEIVNFNCRKLVATMPLFANADPNFVTA 486

Query: 360 LVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISII 419
           ++ KL+ + + PG+Y+ R+G +G++MY I+ G   V+     ++   L  G YFGEI ++
Sbjct: 487 MLSKLRFEVFQPGDYIIREGAVGKKMYFIQHGVAGVITKS--SKEMKLTDGSYFGEICLL 544

Query: 420 NIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQTIMEE----------KGR 469
             KG     RRTA++++  Y  L+ LS ++  EVL EYP  +   E           K  
Sbjct: 545 T-KG-----RRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKN 598

Query: 470 EILLKMNKLDVN 481
            ILL+  + D+N
Sbjct: 599 SILLQKFQKDLN 610


>gi|27886653 potassium voltage-gated channel, subfamily H, member 7
           isoform 1 [Homo sapiens]
          Length = 1196

 Score =  144 bits (364), Expect = 2e-34
 Identities = 102/411 (24%), Positives = 199/411 (48%), Gaps = 35/411 (8%)

Query: 71  VLDYTSDLLYLLDMVVRFHTGFLEQGILVV-DKGRISSRYVRTWSFFLDLASLMPTDVVY 129
           V+D   D+++++D+++ F T ++ Q   VV D  +I+  Y + W F +D+ + +P D++ 
Sbjct: 453 VVDLIVDIMFIIDILINFRTTYVNQNEEVVSDPAKIAIHYFKGW-FLIDMVAAIPFDLLI 511

Query: 130 VRLGPHTPT-----LRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVI-HWN 183
              G    T     L+  R LR  R+    DR     A      +  L++ IF +I HW 
Sbjct: 512 FGSGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGA-----AVLMLLMCIFALIAHWL 566

Query: 184 SCLYFALSR----YLGFGRDAWV----------YPDPAQPGFERLRRQYLYSFYFSTLIL 229
           +C+++A+      YL   +  W+          Y D        ++ +Y+ + YF+   L
Sbjct: 567 ACIWYAIGNVERPYLT-DKIGWLDSLGQQIGKRYNDSDSSSGPSIKDKYVTALYFTFSSL 625

Query: 230 TTVG-DTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKK 288
           T+VG     P    E +F +   L+  + +A+I G++S++I  + +  A ++     VK+
Sbjct: 626 TSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQMLRVKE 685

Query: 289 YMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQI 348
           +++   +   L +R+ +++QH        +   +L+  PE L+A++ + ++ + L   + 
Sbjct: 686 FIRFHQIPNPLRQRLEEYFQHAWTYTNGIDMNMVLKGFPECLQADICLHLNQTLLQNCKA 745

Query: 349 FQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLG 408
           F+      L  L +K +     PG+ +   GD+   +Y +  G + ++ DD +   A+LG
Sbjct: 746 FRGASKGCLRALAMKFKTTHAPPGDTLVHCGDVLTALYFLSRGSIEILKDDIVV--AILG 803

Query: 409 AGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQ 459
               FGE+  +  K   S     A++++L Y DL  + +EDL EVL  YP+
Sbjct: 804 KNDIFGEMVHLYAKPGKS----NADVRALTYCDLHKIQREDLLEVLDMYPE 850


>gi|13540549 potassium voltage-gated channel, subfamily H, member 6
           isoform 1 [Homo sapiens]
          Length = 994

 Score =  137 bits (345), Expect = 3e-32
 Identities = 102/409 (24%), Positives = 193/409 (47%), Gaps = 33/409 (8%)

Query: 71  VLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGR-ISSRYVRTWSFFLDLASLMPTDVVY 129
           V+D   D+++++D+V+ F T ++     VV   R I+  Y + W F +D+ + +P D++ 
Sbjct: 302 VVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGW-FLIDMVAAIPFDLLI 360

Query: 130 VRLGPHTPT-----LRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNS 184
            R G    T     L+  R LR  R+    DR         A  +  LM    ++ HW +
Sbjct: 361 FRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEY----GAAVLFLLMCTFALIAHWLA 416

Query: 185 CLYFALSR----YLGFGRDAWVYPDPAQPGFE----------RLRRQYLYSFYFSTLILT 230
           C+++A+      YL   +  W+     Q G             ++ +Y+ + YF+   LT
Sbjct: 417 CIWYAIGNVERPYLEH-KIGWLDSLGVQLGKRYNGSDPASGPSVQDKYVTALYFTFSSLT 475

Query: 231 TVG-DTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKY 289
           +VG     P    E +F +   L+  + +A+I G++S++I  + +  A ++     VK++
Sbjct: 476 SVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEF 535

Query: 290 MKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIF 349
           ++   +   L +R+ +++QH        +  A+L+  PE L+A++ + +H + L     F
Sbjct: 536 IRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAF 595

Query: 350 QNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGA 409
                  L  L +K +     PG+ +   GD+   +Y I  G + ++ DD +   A+LG 
Sbjct: 596 SGAGKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVV--AILGK 653

Query: 410 GLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYP 458
              FGE   ++ +   S    +A++++L Y DL  + + DL EVL  YP
Sbjct: 654 NDIFGEPVSLHAQPGKS----SADVRALTYCDLHKIQRADLLEVLDMYP 698


>gi|4504831 potassium voltage-gated channel, subfamily H, member 1
           isoform 2 [Homo sapiens]
          Length = 962

 Score =  136 bits (343), Expect = 5e-32
 Identities = 111/452 (24%), Positives = 205/452 (45%), Gaps = 45/452 (9%)

Query: 37  WLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMVVRFHTGFL-EQ 95
           W   ++    Y  I++     F   Q+   VAWLV+D   D+++L+D+V+ FHT F+   
Sbjct: 220 WDWIILILTFYTAILVPYNVSFKTRQNN--VAWLVVDSIVDVIFLVDIVLNFHTTFVGPA 277

Query: 96  GILVVDKGRISSRYVRTWSFFLDLASLMPTDVVYV------RLGPHTPTLRLNRFLRAPR 149
           G ++ D   I   Y++TW F +DL S +P DV+         +     +L++ R LR  R
Sbjct: 278 GEVISDPKLIRMNYLKTW-FVIDLLSCLPYDVINAFENVDEGISSLFSSLKVVRLLRLGR 336

Query: 150 LFEAFDRTETRTAYPNAFRIAKLMLYIF-VVIHWNSCLYFALSRYLGFGRD-------AW 201
           +    D      A      +  L++ +F +  HW +C+++++  Y  F  D       +W
Sbjct: 337 VARKLDHYIEYGA-----AVLVLLVCVFGLAAHWMACIWYSIGDYEIFDEDTKTIRNNSW 391

Query: 202 VYP---DPAQP------------GFERLRRQYLYSFYFSTLILTTVG-DTPPPAREEEYL 245
           +Y    D   P            G       Y+ S YF+   LT+VG     P+ + E +
Sbjct: 392 LYQLAMDIGTPYQFNGSGSGKWEGGPSKNSVYISSLYFTMTSLTSVGFGNIAPSTDIEKI 451

Query: 246 FMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVID 305
           F V   ++  + +ATI G+++++   M      ++     V+ ++KL  V + L  RV+D
Sbjct: 452 FAVAIMMIGSLLYATIFGNVTTIFQQMYANTNRYHEMLNSVRDFLKLYQVPKGLSERVMD 511

Query: 306 WYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQ 365
           +        +  +   +LQ  P+ +RA++ V ++         F+      L  L ++ Q
Sbjct: 512 YIVSTWSMSRGIDTEKVLQICPKDMRADICVHLNRKVFKEHPAFRLASDGCLRALAMEFQ 571

Query: 366 PQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNM 425
               +PG+ +   G+    +  +  G L V+ DD +   A+LG G  FG++         
Sbjct: 572 TVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQDDEVV--AILGKGDVFGDV----FWKEA 625

Query: 426 SGNRRTANIKSLGYSDLFCLSKEDLREVLSEY 457
           +  +  AN+++L Y DL  + ++ L++VL  Y
Sbjct: 626 TLAQSCANVRALTYCDLHVIKRDALQKVLEFY 657


>gi|26051273 voltage-gated potassium channel, subfamily H, member 2
           isoform c [Homo sapiens]
          Length = 819

 Score =  133 bits (335), Expect = 4e-31
 Identities = 100/419 (23%), Positives = 201/419 (47%), Gaps = 30/419 (7%)

Query: 59  PDLQHGYLVAWL-VLDYTSDLLYLLDMVVRFHTGFLEQGILVVDK-GRISSRYVRTWSFF 116
           P  + GY    L V+D   D+++++D+++ F T ++     VV   GRI+  Y + W F 
Sbjct: 101 PATECGYACQPLAVVDLIVDIMFIVDILINFRTTYVNANEEVVSHPGRIAVHYFKGW-FL 159

Query: 117 LDLASLMPTDVVYVRLGPHT--PTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLML 174
           +D+ + +P D++    G       L+  R LR  R+    DR         A  +  LM 
Sbjct: 160 IDMVAAIPFDLLIFGSGSEELIGLLKTARLLRLVRVARKLDRYSEY----GAAVLFLLMC 215

Query: 175 YIFVVIHWNSCLYFALSRYLGFGRDA---WVYP---------DPAQPGFERLRRQYLYSF 222
              ++ HW +C+++A+        D+   W++          + +  G   ++ +Y+ + 
Sbjct: 216 TFALIAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTAL 275

Query: 223 YFSTLILTTVG-DTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYP 281
           YF+   LT+VG     P    E +F +   L+  + +A+I G++S++I  + +  A ++ 
Sbjct: 276 YFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHT 335

Query: 282 DHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLS 341
               V+++++   +   L +R+ +++QH        +  A+L+  PE L+A++ + ++ S
Sbjct: 336 QMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRS 395

Query: 342 TLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGI 401
            L   + F+      L  L +K +     PG+ +   GD+   +Y I  G + ++  D +
Sbjct: 396 LLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEILRGDVV 455

Query: 402 TQYAVLGAGLYFGE-ISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQ 459
              A+LG    FGE +++    G  +G     ++++L Y DL  + ++DL EVL  YP+
Sbjct: 456 V--AILGKNDIFGEPLNLYARPGKSNG-----DVRALTYCDLHKIHRDDLLEVLDMYPE 507


>gi|4557729 voltage-gated potassium channel, subfamily H, member 2
           isoform a [Homo sapiens]
          Length = 1159

 Score =  133 bits (335), Expect = 4e-31
 Identities = 100/419 (23%), Positives = 201/419 (47%), Gaps = 30/419 (7%)

Query: 59  PDLQHGYLVAWL-VLDYTSDLLYLLDMVVRFHTGFLEQGILVVDK-GRISSRYVRTWSFF 116
           P  + GY    L V+D   D+++++D+++ F T ++     VV   GRI+  Y + W F 
Sbjct: 441 PATECGYACQPLAVVDLIVDIMFIVDILINFRTTYVNANEEVVSHPGRIAVHYFKGW-FL 499

Query: 117 LDLASLMPTDVVYVRLGPHT--PTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLML 174
           +D+ + +P D++    G       L+  R LR  R+    DR         A  +  LM 
Sbjct: 500 IDMVAAIPFDLLIFGSGSEELIGLLKTARLLRLVRVARKLDRYSEY----GAAVLFLLMC 555

Query: 175 YIFVVIHWNSCLYFALSRYLGFGRDA---WVYP---------DPAQPGFERLRRQYLYSF 222
              ++ HW +C+++A+        D+   W++          + +  G   ++ +Y+ + 
Sbjct: 556 TFALIAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTAL 615

Query: 223 YFSTLILTTVG-DTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYP 281
           YF+   LT+VG     P    E +F +   L+  + +A+I G++S++I  + +  A ++ 
Sbjct: 616 YFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHT 675

Query: 282 DHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLS 341
               V+++++   +   L +R+ +++QH        +  A+L+  PE L+A++ + ++ S
Sbjct: 676 QMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRS 735

Query: 342 TLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGI 401
            L   + F+      L  L +K +     PG+ +   GD+   +Y I  G + ++  D +
Sbjct: 736 LLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEILRGDVV 795

Query: 402 TQYAVLGAGLYFGE-ISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQ 459
              A+LG    FGE +++    G  +G     ++++L Y DL  + ++DL EVL  YP+
Sbjct: 796 V--AILGKNDIFGEPLNLYARPGKSNG-----DVRALTYCDLHKIHRDDLLEVLDMYPE 847


>gi|27886667 potassium voltage-gated channel, subfamily H, member 8
           [Homo sapiens]
          Length = 1107

 Score =  133 bits (334), Expect = 5e-31
 Identities = 99/412 (24%), Positives = 207/412 (50%), Gaps = 37/412 (8%)

Query: 71  VLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGR-ISSRYVRTWSFFLDLASLMPTDVVY 129
           V D   ++L+++D+++ F T ++ +   V+ + R I   YV TW F +DL + +P D++Y
Sbjct: 259 VSDIAVEILFIIDIILNFRTTYVSKSGQVIFEARSICIHYVTTW-FIIDLIAALPFDLLY 317

Query: 130 ---VRLGPHTPTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVI-HWNSC 185
              V +      L+  R LR  RL +  DR    +       +  L++ +F ++ HW +C
Sbjct: 318 AFNVTVVSLVHLLKTVRLLRLLRLLQKLDRYSQHSTI-----VLTLLMSMFALLAHWMAC 372

Query: 186 LYFALSRY-----------------LGFGRDAWVYPDPAQPGFERLRRQYLYSFYFSTLI 228
           +++ + +                  LG   ++  Y +    G   +R  Y+ + YF+   
Sbjct: 373 IWYVIGKMEREDNSLLKWEVGWLHELGKRLESPYYGNNTLGG-PSIRSAYIAALYFTLSS 431

Query: 229 LTTVGDTPPPAREE-EYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVK 287
           LT+VG     A  + E +F +   L+  +  A + G+++++I  M +  + ++     +K
Sbjct: 432 LTSVGFGNVSANTDAEKIFSICTMLIGALMHALVFGNVTAIIQRMYSRWSLYHTRTKDLK 491

Query: 288 KYMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQ 347
            ++++ H+ ++L++R+++++Q         +   +L+  P+ LR+++ + ++   L ++ 
Sbjct: 492 DFIRVHHLPQQLKQRMLEYFQTTWSVNNGIDSNELLKDFPDELRSDITMHLNKEIL-QLS 550

Query: 348 IFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVL 407
           +F+      L  L L ++    +PGEY+ R+GD  Q +Y +  G + V+ D  +   A+L
Sbjct: 551 LFECASRGCLRSLSLHIKTSFCAPGEYLLRQGDALQAIYFVCSGSMEVLKDSMV--LAIL 608

Query: 408 GAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQ 459
           G G   G  + ++IK  +   +  A++K+L Y DL C+  + L EVL  YP+
Sbjct: 609 GKGDLIG--ANLSIKDQVI--KTNADVKALTYCDLQCIILKGLFEVLDLYPE 656


>gi|22024390 potassium voltage-gated channel, subfamily H, member 5
           isoform 1 [Homo sapiens]
          Length = 988

 Score =  132 bits (333), Expect = 7e-31
 Identities = 111/451 (24%), Positives = 200/451 (44%), Gaps = 44/451 (9%)

Query: 37  WLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMVVRFHTGFLEQG 96
           W   ++    Y  I++     F   Q+   +AWLVLD   D+++L+D+V+ FHT F+  G
Sbjct: 217 WDWVILILTFYTAIMVPYNVSFKTKQNN--IAWLVLDSVVDVIFLVDIVLNFHTTFVGPG 274

Query: 97  ILVV-DKGRISSRYVRTWSFFLDLASLMPTDVVYV------RLGPHTPTLRLNRFLRAPR 149
             V+ D   I   Y++TW F +DL S +P D++         +     +L++ R LR  R
Sbjct: 275 GEVISDPKLIRMNYLKTW-FVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLGR 333

Query: 150 LFEAFDRTETRTAYPNAFRIAKLMLYIF-VVIHWNSCLYFALSRYLGFGR-------DAW 201
           +    D      A      +  L++ +F +V HW +C+++++  Y            D+W
Sbjct: 334 VARKLDHYLEYGA-----AVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSW 388

Query: 202 VYPDPAQ--------------PGFERLRRQYLYSFYFSTLILTTVG-DTPPPAREEEYLF 246
           +Y                    G       Y+ S YF+   LTT+G     P  + E +F
Sbjct: 389 LYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMF 448

Query: 247 MVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDW 306
            V   ++  + +ATI G+++++   M      ++     V+ ++KL  V + L  RV+D+
Sbjct: 449 SVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDY 508

Query: 307 YQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQP 366
                   K  +   +L   P+ +RA++ V ++    +    F+      L  L ++ Q 
Sbjct: 509 IVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQT 568

Query: 367 QTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNMS 426
              +PG+ +   G+    +  +  G L V+ DD +   A+LG G  FG+I         +
Sbjct: 569 IHCAPGDLIYHAGESVDALCFVVSGSLEVIQDDEVV--AILGKGDVFGDI----FWKETT 622

Query: 427 GNRRTANIKSLGYSDLFCLSKEDLREVLSEY 457
                AN+++L Y DL  + +E L +VL  Y
Sbjct: 623 LAHACANVRALTYCDLHIIKREALLKVLDFY 653


>gi|27886648 potassium voltage-gated channel, subfamily H, member 5
           isoform 2 [Homo sapiens]
          Length = 624

 Score =  132 bits (333), Expect = 7e-31
 Identities = 111/451 (24%), Positives = 200/451 (44%), Gaps = 44/451 (9%)

Query: 37  WLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMVVRFHTGFLEQG 96
           W   ++    Y  I++     F   Q+   +AWLVLD   D+++L+D+V+ FHT F+  G
Sbjct: 159 WDWVILILTFYTAIMVPYNVSFKTKQNN--IAWLVLDSVVDVIFLVDIVLNFHTTFVGPG 216

Query: 97  ILVV-DKGRISSRYVRTWSFFLDLASLMPTDVVYV------RLGPHTPTLRLNRFLRAPR 149
             V+ D   I   Y++TW F +DL S +P D++         +     +L++ R LR  R
Sbjct: 217 GEVISDPKLIRMNYLKTW-FVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLGR 275

Query: 150 LFEAFDRTETRTAYPNAFRIAKLMLYIF-VVIHWNSCLYFALSRYLGFGR-------DAW 201
           +    D      A      +  L++ +F +V HW +C+++++  Y            D+W
Sbjct: 276 VARKLDHYLEYGA-----AVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSW 330

Query: 202 VYPDPAQ--------------PGFERLRRQYLYSFYFSTLILTTVG-DTPPPAREEEYLF 246
           +Y                    G       Y+ S YF+   LTT+G     P  + E +F
Sbjct: 331 LYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMF 390

Query: 247 MVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDW 306
            V   ++  + +ATI G+++++   M      ++     V+ ++KL  V + L  RV+D+
Sbjct: 391 SVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDY 450

Query: 307 YQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQP 366
                   K  +   +L   P+ +RA++ V ++    +    F+      L  L ++ Q 
Sbjct: 451 IVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQT 510

Query: 367 QTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNMS 426
              +PG+ +   G+    +  +  G L V+ DD +   A+LG G  FG+I         +
Sbjct: 511 IHCAPGDLIYHAGESVDALCFVVSGSLEVIQDDEVV--AILGKGDVFGDI----FWKETT 564

Query: 427 GNRRTANIKSLGYSDLFCLSKEDLREVLSEY 457
                AN+++L Y DL  + +E L +VL  Y
Sbjct: 565 LAHACANVRALTYCDLHIIKREALLKVLDFY 595


>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
           [Homo sapiens]
          Length = 1017

 Score =  132 bits (331), Expect = 1e-30
 Identities = 107/416 (25%), Positives = 202/416 (48%), Gaps = 34/416 (8%)

Query: 70  LVLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGR-ISSRYVRTWSFFLDLASLMPTDVV 128
           LV D   ++L++LD+++ F T ++ Q   V+   R I   Y+ TW FF+DL + +P D++
Sbjct: 264 LVSDIAVEMLFILDIILNFRTTYVSQSGQVISAPRSIGLHYLATW-FFIDLIAALPFDLL 322

Query: 129 YVRLGPHTPTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNSCLYF 188
           Y+     T  + L + +R  RL     + E R +  +A  +  LM    ++ HW +C+++
Sbjct: 323 YIFNITVTSLVHLLKTVRLLRLLRLLQKLE-RYSQCSAVVLTLLMSVFALLAHWMACIWY 381

Query: 189 ALSRYLGFGRD------AWV----------YPDPAQPGFERLRRQYLYSFYFSTLILTTV 232
            + R      D       W+          Y + +  G  R R  Y+ + YF+   LT+V
Sbjct: 382 VIGRREMEANDPLLWDIGWLHELGKRLEVPYVNGSVGGPSR-RSAYIAALYFTLSSLTSV 440

Query: 233 GDTPPPAR-EEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMK 291
           G     A  + E +F +   L+  +  A + G+++++I  M +  + ++     +K +++
Sbjct: 441 GFGNVCANTDAEKIFSICTMLIGALMHAVVFGNVTAIIQRMYSRRSLYHSRMKDLKDFIR 500

Query: 292 LQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQN 351
           +  + R L++R+++++Q         +   +L+  P+ LRA++A+ ++   L ++ +F  
Sbjct: 501 VHRLPRPLKQRMLEYFQTTWAVNSGIDANELLRDFPDELRADIAMHLNREIL-QLPLFGA 559

Query: 352 CEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGL 411
                L  L L ++    +PGEY+ R+GD  Q  Y +  G L V+ D+ +   A+LG G 
Sbjct: 560 ASRGCLRALSLHIKTSFCAPGEYLLRRGDALQAHYYVCSGSLEVLRDNMV--LAILGKGD 617

Query: 412 YFGEISIINIKGNMSG--------NRRTANIKSLGYSDLFCLSKEDLREVLSEYPQ 459
             G  + I   G   G         + +A++K+L Y  L  LS   L EVL  YP+
Sbjct: 618 LIG--ADIPEPGQEPGLGADPNFVLKTSADVKALTYCGLQQLSSRGLAEVLRLYPE 671


>gi|27437001 potassium voltage-gated channel, subfamily H, member 1
           isoform 1 [Homo sapiens]
          Length = 989

 Score =  127 bits (318), Expect = 4e-29
 Identities = 112/479 (23%), Positives = 206/479 (43%), Gaps = 72/479 (15%)

Query: 37  WLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMVVRFHTGFL-EQ 95
           W   ++    Y  I++     F   Q+   VAWLV+D   D+++L+D+V+ FHT F+   
Sbjct: 220 WDWIILILTFYTAILVPYNVSFKTRQNN--VAWLVVDSIVDVIFLVDIVLNFHTTFVGPA 277

Query: 96  GILVVDKGRISSRYVRTWSFFLDLASLMPTDVVY-----------------VRLGPHTP- 137
           G ++ D   I   Y++TW F +DL S +P DV+                  +      P 
Sbjct: 278 GEVISDPKLIRMNYLKTW-FVIDLLSCLPYDVINAFENVDEVSAFMGDPGKIGFADQIPP 336

Query: 138 ---------------TLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIF-VVIH 181
                          +L++ R LR  R+    D      A      +  L++ +F +  H
Sbjct: 337 PLEGRESQGISSLFSSLKVVRLLRLGRVARKLDHYIEYGA-----AVLVLLVCVFGLAAH 391

Query: 182 WNSCLYFALSRYLGFGRD-------AWVYP---DPAQP------------GFERLRRQYL 219
           W +C+++++  Y  F  D       +W+Y    D   P            G       Y+
Sbjct: 392 WMACIWYSIGDYEIFDEDTKTIRNNSWLYQLAMDIGTPYQFNGSGSGKWEGGPSKNSVYI 451

Query: 220 YSFYFSTLILTTVG-DTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAA 278
            S YF+   LT+VG     P+ + E +F V   ++  + +ATI G+++++   M      
Sbjct: 452 SSLYFTMTSLTSVGFGNIAPSTDIEKIFAVAIMMIGSLLYATIFGNVTTIFQQMYANTNR 511

Query: 279 FYPDHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSV 338
           ++     V+ ++KL  V + L  RV+D+        +  +   +LQ  P+ +RA++ V +
Sbjct: 512 YHEMLNSVRDFLKLYQVPKGLSERVMDYIVSTWSMSRGIDTEKVLQICPKDMRADICVHL 571

Query: 339 HLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVAD 398
           +         F+      L  L ++ Q    +PG+ +   G+    +  +  G L V+ D
Sbjct: 572 NRKVFKEHPAFRLASDGCLRALAMEFQTVHCAPGDLIYHAGESVDSLCFVVSGSLEVIQD 631

Query: 399 DGITQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEY 457
           D +   A+LG G  FG++         +  +  AN+++L Y DL  + ++ L++VL  Y
Sbjct: 632 DEVV--AILGKGDVFGDV----FWKEATLAQSCANVRALTYCDLHVIKRDALQKVLEFY 684


>gi|38569493 potassium voltage-gated channel, subfamily H
           (eag-related), member 3 [Homo sapiens]
          Length = 1083

 Score =  126 bits (316), Expect = 6e-29
 Identities = 110/440 (25%), Positives = 195/440 (44%), Gaps = 66/440 (15%)

Query: 71  VLDYTSDLLYLLDMVVRFHTGFLEQ-GILVVDKGRISSRYVRTWSFFLDLASLMPTDVVY 129
           V D   ++L++LD+V+ F T F+ + G +V     I   YV TW F LD+ + +P D+++
Sbjct: 263 VCDLAVEVLFILDIVLNFRTTFVSKSGQVVFAPKSICLHYVTTW-FLLDVIAALPFDLLH 321

Query: 130 -----VRLGPHTPTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVI-HWN 183
                V  G H   L+  R LR  RL    DR    +A      +  L++ +F ++ HW 
Sbjct: 322 AFKVNVYFGAHL--LKTVRLLRLLRLLPRLDRYSQYSAV-----VLTLLMAVFALLAHWV 374

Query: 184 SCLYFALSR--------------------------YLGFGRDAWVYPDPAQP-------- 209
           +C++F + +                          Y   GR         Q         
Sbjct: 375 ACVWFYIGQREIESSESELPEIGWLQELARRLETPYYLVGRRPAGGNSSGQSDNCSSSSE 434

Query: 210 ---------GFERLRRQYLYSFYFSTLILTTVGDTPPPAREE-EYLFMVGDFLLAVMGFA 259
                    G   LR  Y+ S YF+   LT+VG     A  + E +F +   L+  +  A
Sbjct: 435 ANGTGLELLGGPSLRSAYITSLYFALSSLTSVGFGNVSANTDTEKIFSICTMLIGALMHA 494

Query: 260 TIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMTNE 319
            + G+++++I  M      ++     ++ Y+++  + + L++R+++++Q         + 
Sbjct: 495 VVFGNVTAIIQRMYARRFLYHSRTRDLRDYIRIHRIPKPLKQRMLEYFQATWAVNNGIDT 554

Query: 320 VAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKG 379
             +LQ LP+ LRA++A+ +H   L ++ +F+      L  L L L+P   +PGEY+  +G
Sbjct: 555 TELLQSLPDELRADIAMHLHKEVL-QLPLFEAASRGCLRALSLALRPAFCTPGEYLIHQG 613

Query: 380 DIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSLGY 439
           D  Q +Y +  G + V+   G T  A+LG G   G      +       +  A++K L Y
Sbjct: 614 DALQALYFVCSGSMEVL--KGGTVLAILGKGDLIG----CELPRREQVVKANADVKGLTY 667

Query: 440 SDLFCLSKEDLREVLSEYPQ 459
             L CL    L + L+ YP+
Sbjct: 668 CVLQCLQLAGLHDSLALYPE 687


>gi|27886651 potassium voltage-gated channel, subfamily H, member 6
           isoform 2 [Homo sapiens]
          Length = 905

 Score =  121 bits (303), Expect = 2e-27
 Identities = 93/394 (23%), Positives = 174/394 (44%), Gaps = 56/394 (14%)

Query: 71  VLDYTSDLLYLLDMVVRFHTGFLEQGILVVDKGR-ISSRYVRTWSFFLDLASLMPTDVVY 129
           V+D   D+++++D+V+ F T ++     VV   R I+  Y + W F +D+ + +P D++ 
Sbjct: 302 VVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGW-FLIDMVAAIPFDLLI 360

Query: 130 VRLGPHTPT-----LRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVIHWNS 184
            R G    T     L+  R LR  R+    DR         A  +  LM    ++ HW +
Sbjct: 361 FRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEY----GAAVLFLLMCTFALIAHWLA 416

Query: 185 CLYFALSRYLGFGRDAWVYPDPAQPGFERLRRQYLYSFYFSTLILTTVGDTPPPAREEEY 244
           C+    S  +GFG  +                                     P    E 
Sbjct: 417 CICSLTS--VGFGNVS-------------------------------------PNTNSEK 437

Query: 245 LFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVI 304
           +F +   L+  + +A+I G++S++I  + +  A ++     VK++++   +   L +R+ 
Sbjct: 438 VFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLE 497

Query: 305 DWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKL 364
           +++QH        +  A+L+  PE L+A++ + +H + L     F       L  L +K 
Sbjct: 498 EYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFSGAGKGCLRALAVKF 557

Query: 365 QPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGAGLYFGEISIINIKGN 424
           +     PG+ +   GD+   +Y I  G + ++ DD +   A+LG    FGE   ++ +  
Sbjct: 558 KTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVV--AILGKNDIFGEPVSLHAQPG 615

Query: 425 MSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYP 458
            S    +A++++L Y DL  + + DL EVL  YP
Sbjct: 616 KS----SADVRALTYCDLHKIQRADLLEVLDMYP 645


>gi|26051271 voltage-gated potassium channel, subfamily H, member 2
           isoform b [Homo sapiens]
          Length = 888

 Score =  117 bits (294), Expect = 2e-26
 Identities = 93/404 (23%), Positives = 188/404 (46%), Gaps = 26/404 (6%)

Query: 59  PDLQHGYLVAWL-VLDYTSDLLYLLDMVVRFHTGFLEQGILVVDK-GRISSRYVRTWSFF 116
           P  + GY    L V+D   D+++++D+++ F T ++     VV   GRI+  Y + W F 
Sbjct: 441 PATECGYACQPLAVVDLIVDIMFIVDILINFRTTYVNANEEVVSHPGRIAVHYFKGW-FL 499

Query: 117 LDLASLMPTDVVYVRLGPHT--PTLRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLML 174
           +D+ + +P D++    G       L+  R LR  R+    DR         A  +  LM 
Sbjct: 500 IDMVAAIPFDLLIFGSGSEELIGLLKTARLLRLVRVARKLDRYSEY----GAAVLFLLMC 555

Query: 175 YIFVVIHWNSCLYFALSRYLGFGRDA---WVYP---------DPAQPGFERLRRQYLYSF 222
              ++ HW +C+++A+        D+   W++          + +  G   ++ +Y+ + 
Sbjct: 556 TFALIAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTAL 615

Query: 223 YFSTLILTTVG-DTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYP 281
           YF+   LT+VG     P    E +F +   L+  + +A+I G++S++I  + +  A ++ 
Sbjct: 616 YFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHT 675

Query: 282 DHALVKKYMKLQHVNRKLERRVIDWYQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLS 341
               V+++++   +   L +R+ +++QH        +  A+L+  PE L+A++ + ++ S
Sbjct: 676 QMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRS 735

Query: 342 TLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGI 401
            L   + F+      L  L +K +     PG+ +   GD+   +Y I  G + ++  D +
Sbjct: 736 LLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEILRGDVV 795

Query: 402 TQYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCL 445
              A+LG G  +G  + + +    S      N++SLG     CL
Sbjct: 796 V--AILGMG--WGAGTGLEMPSAASRGASLLNMQSLGLWTWDCL 835


>gi|27886646 potassium voltage-gated channel, subfamily H, member 5
           isoform 3 [Homo sapiens]
          Length = 611

 Score =  114 bits (285), Expect = 2e-25
 Identities = 93/395 (23%), Positives = 173/395 (43%), Gaps = 38/395 (9%)

Query: 37  WLNTMVFPVMYNLIILVCRACFPDLQHGYLVAWLVLDYTSDLLYLLDMVVRFHTGFLEQG 96
           W   ++    Y  I++     F   Q+   +AWLVLD   D+++L+D+V+ FHT F+  G
Sbjct: 217 WDWVILILTFYTAIMVPYNVSFKTKQNN--IAWLVLDSVVDVIFLVDIVLNFHTTFVGPG 274

Query: 97  ILVV-DKGRISSRYVRTWSFFLDLASLMPTDVVYV------RLGPHTPTLRLNRFLRAPR 149
             V+ D   I   Y++TW F +DL S +P D++         +     +L++ R LR  R
Sbjct: 275 GEVISDPKLIRMNYLKTW-FVIDLLSCLPYDIINAFENVDEGISSLFSSLKVVRLLRLGR 333

Query: 150 LFEAFDRTETRTAYPNAFRIAKLMLYIF-VVIHWNSCLYFALSRYLGFGR-------DAW 201
           +    D      A      +  L++ +F +V HW +C+++++  Y            D+W
Sbjct: 334 VARKLDHYLEYGA-----AVLVLLVCVFGLVAHWLACIWYSIGDYEVIDEVTNTIQIDSW 388

Query: 202 VYPDPAQ--------------PGFERLRRQYLYSFYFSTLILTTVG-DTPPPAREEEYLF 246
           +Y                    G       Y+ S YF+   LTT+G     P  + E +F
Sbjct: 389 LYQLALSIGTPYRYNTSAGIWEGGPSKDSLYVSSLYFTMTSLTTIGFGNIAPTTDVEKMF 448

Query: 247 MVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKKYMKLQHVNRKLERRVIDW 306
            V   ++  + +ATI G+++++   M      ++     V+ ++KL  V + L  RV+D+
Sbjct: 449 SVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDY 508

Query: 307 YQHLQINKKMTNEVAILQHLPERLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQP 366
                   K  +   +L   P+ +RA++ V ++    +    F+      L  L ++ Q 
Sbjct: 509 IVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQT 568

Query: 367 QTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGI 401
              +PG+ +   G+    +  +  G L V+ DD +
Sbjct: 569 IHCAPGDLIYHAGESVDALCFVVSGSLEVIQDDEV 603


>gi|27886665 potassium voltage-gated channel, subfamily H, member 7
           isoform 2 [Homo sapiens]
          Length = 732

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 63/261 (24%), Positives = 127/261 (48%), Gaps = 29/261 (11%)

Query: 71  VLDYTSDLLYLLDMVVRFHTGFLEQGILVV-DKGRISSRYVRTWSFFLDLASLMPTDVVY 129
           V+D   D+++++D+++ F T ++ Q   VV D  +I+  Y + W F +D+ + +P D++ 
Sbjct: 446 VVDLIVDIMFIIDILINFRTTYVNQNEEVVSDPAKIAIHYFKGW-FLIDMVAAIPFDLLI 504

Query: 130 VRLGPHTPT-----LRLNRFLRAPRLFEAFDRTETRTAYPNAFRIAKLMLYIFVVI-HWN 183
              G    T     L+  R LR  R+    DR     A      +  L++ IF +I HW 
Sbjct: 505 FGSGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGA-----AVLMLLMCIFALIAHWL 559

Query: 184 SCLYFALSR----YLGFGRDAWV----------YPDPAQPGFERLRRQYLYSFYFSTLIL 229
           +C+++A+      YL   +  W+          Y D        ++ +Y+ + YF+   L
Sbjct: 560 ACIWYAIGNVERPYL-TDKIGWLDSLGQQIGKRYNDSDSSSGPSIKDKYVTALYFTFSSL 618

Query: 230 TTVG-DTPPPAREEEYLFMVGDFLLAVMGFATIMGSMSSVIYNMNTADAAFYPDHALVKK 288
           T+VG     P    E +F +   L+  + +A+I G++S++I  + +  A ++     VK+
Sbjct: 619 TSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHMQMLRVKE 678

Query: 289 YMKLQHVNRKLERRVIDWYQH 309
           +++   +   L +R+ +++QH
Sbjct: 679 FIRFHQIPNPLRQRLEEYFQH 699


>gi|148612818 protein kinase, cGMP-dependent, type I isoform 1 [Homo
           sapiens]
          Length = 671

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 25/105 (23%), Positives = 55/105 (52%), Gaps = 8/105 (7%)

Query: 350 QNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGA 409
           +N E S ++E+V  + P  Y     + ++GD+G  +Y++ +G++ V  +    +   +G 
Sbjct: 105 KNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEG--VKLCTMGP 162

Query: 410 GLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVL 454
           G  FGE++I      +    RTA +K+L    L+ + ++  + ++
Sbjct: 163 GKVFGELAI------LYNCTRTATVKTLVNVKLWAIDRQCFQTIM 201



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 10/100 (10%)

Query: 339 HLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVAD 398
           ++  L  V  FQ+    +L +L   L+   Y  GEY+ R+G  G   +II +G + V  +
Sbjct: 212 YMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGTVNVTRE 271

Query: 399 DGITQYAV----LGAGLYFGEISIINIKGNMSGNRRTANI 434
           D  ++  V    LG G +FGE      K     + RTAN+
Sbjct: 272 DSPSEDPVFLRTLGKGDWFGE------KALQGEDVRTANV 305


>gi|10835242 protein kinase, cGMP-dependent, type I isoform 2 [Homo
           sapiens]
          Length = 686

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 25/105 (23%), Positives = 55/105 (52%), Gaps = 8/105 (7%)

Query: 350 QNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGITQYAVLGA 409
           +N E S ++E+V  + P  Y     + ++GD+G  +Y++ +G++ V  +    +   +G 
Sbjct: 120 KNLELSQIQEIVDCMYPVEYGKDSCIIKEGDVGSLVYVMEDGKVEVTKEG--VKLCTMGP 177

Query: 410 GLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVL 454
           G  FGE++I      +    RTA +K+L    L+ + ++  + ++
Sbjct: 178 GKVFGELAI------LYNCTRTATVKTLVNVKLWAIDRQCFQTIM 216



 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 10/100 (10%)

Query: 339 HLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVAD 398
           ++  L  V  FQ+    +L +L   L+   Y  GEY+ R+G  G   +II +G + V  +
Sbjct: 227 YMEFLKSVPTFQSLPEEILSKLADVLEETHYENGEYIIRQGARGDTFFIISKGTVNVTRE 286

Query: 399 DGITQYAV----LGAGLYFGEISIINIKGNMSGNRRTANI 434
           D  ++  V    LG G +FGE      K     + RTAN+
Sbjct: 287 DSPSEDPVFLRTLGKGDWFGE------KALQGEDVRTANV 320


>gi|5453978 protein kinase, cGMP-dependent, type II [Homo sapiens]
          Length = 762

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 36/143 (25%), Positives = 70/143 (48%), Gaps = 13/143 (9%)

Query: 329 RLRAEVAVSVHLSTLSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYII 388
           R  A+     + + L  V + +N     L +++  L+ + Y  G+Y+ R+G+ G   +I+
Sbjct: 267 RRTAQARDEQYRNFLRSVSLLKNLPEDKLTKIIDCLEVEYYDKGDYIIREGEEGSTFFIL 326

Query: 389 REGQLAVV-ADDGITQ---YAVLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFC 444
            +G++ V  + +G  Q      L  G YFGE ++I      S + R+ANI +   +D+ C
Sbjct: 327 AKGKVKVTQSTEGHDQPQLIKTLQKGEYFGEKALI------SDDVRSANIIA-EENDVAC 379

Query: 445 L--SKEDLREVLSEYPQAQTIME 465
           L   +E   + +  + + Q  +E
Sbjct: 380 LVIDRETFNQTVGTFEELQKYLE 402



 Score = 42.0 bits (97), Expect = 0.002
 Identities = 29/136 (21%), Positives = 67/136 (49%), Gaps = 11/136 (8%)

Query: 343 LSRVQIFQNCEASLLEELVLKLQPQTYSPGEYVCRKGDIGQEMYIIREGQLAVVADDGIT 402
           L++ Q  +  +   ++++V  +  + Y  G Y+ ++G+ G  ++++ EG+L V    G  
Sbjct: 163 LNKNQFLKRLDPQQIKDMVECMYGRNYQQGSYIIKQGEPGNHIFVLAEGRLEVF--QGEK 220

Query: 403 QYAVLGAGLYFGEISIINIKGNMSGNRRTANIKSLGYSDLFCLSKEDLREVLSEYPQAQT 462
             + +     FGE++I      +    RTA++K++     + L +E  + ++    QA+ 
Sbjct: 221 LLSSIPMWTTFGELAI------LYNCTRTASVKAITNVKTWALDREVFQNIMRRTAQAR- 273

Query: 463 IMEEKGREILLKMNKL 478
             +E+ R  L  ++ L
Sbjct: 274 --DEQYRNFLRSVSLL 287


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,006,858
Number of Sequences: 37866
Number of extensions: 976232
Number of successful extensions: 5349
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 5093
Number of HSP's gapped (non-prelim): 274
length of query: 575
length of database: 18,247,518
effective HSP length: 108
effective length of query: 467
effective length of database: 14,157,990
effective search space: 6611781330
effective search space used: 6611781330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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