Guide to the Human Genome
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Name: PRKG1 Sequence: fasta or formatted (686aa) NCBI GI: 10835242
Description:

protein kinase, cGMP-dependent, type I isoform 2

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [671aa] protein kinase, cGMP-dependent, type I isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         41           2
 C cysteine            1.5         10           1
 D aspartate           7.4         51           2
 E glutamate           8.0         55           2
 F phenylalanine       4.8         33           2
 G glycine             6.7         46           2
 H histidine           1.6         11           1
 I isoleucine          7.3         50           2
 K lysine              8.2         56           2
 L leucine             9.5         65           2
 M methionine          2.2         15           2
 N asparagine          3.4         23           1
 P proline             4.2         29           3
 Q glutamine           3.9         27           2
 R arginine            4.5         31           1
 S serine              5.4         37           1
 T threonine           5.8         40           2
 V valine              5.1         35           2
 W tryptophan          1.2          8           1
 Y tyrosine            3.4         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein kinase, cGMP-dependent, type I isoform 2 [Ho... 
PRKG1                 0.875   protein kinase, cGMP-dependent, type I isoform 1 [H...
PRKG2                 0.479   protein kinase, cGMP-dependent, type II 
PRKX                  0.197   protein kinase, X-linked 
PRKACB                0.188   cAMP-dependent protein kinase catalytic subunit beta ...
PRKACB                0.188   cAMP-dependent protein kinase catalytic subunit beta...
PRKACA                0.186   cAMP-dependent protein kinase catalytic subunit alph...
PRKACA                0.186   cAMP-dependent protein kinase catalytic subunit alpha...
PRKACG                0.180   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
RPS6KB2               0.157   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
RPS6KB1               0.153   ribosomal protein S6 kinase, 70kDa, polypeptide 1 [Ho...
RPS6KA3               0.149   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
RPS6KA1               0.149   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.149   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA2               0.147   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.147   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
PRKACB                0.145   cAMP-dependent protein kinase catalytic subunit beta...
RPS6KA6               0.144   ribosomal protein S6 kinase polypeptide 6 
PKN1                  0.141   protein kinase N1 isoform 1 
PKN1                  0.141   protein kinase N1 isoform 2 
PKN2                  0.140   protein kinase N2 
AKT3                  0.139   AKT3 kinase isoform 1 
AKT3                  0.139   AKT3 kinase isoform 2 
SGK1                  0.139   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.139   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.139   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.139   serum/glucocorticoid regulated kinase 1 isoform 2 [...
AKT2                  0.139   AKT2 kinase 
AKT1                  0.136   AKT1 kinase 
AKT1                  0.136   AKT1 kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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