RBM39 26523

Name: RBM39	Sequence: fasta or formatted (530aa)		NCBI GI: 35493811
Description: RNA binding motif protein 39 isoform a		Referenced in: RNA-binding Proteins Capping and Splicing
Other entries for this name: alt prot [524aa] RNA binding motif protein 39 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 48 4 C cysteine 0.9 5 1 D aspartate 4.9 26 2 E glutamate 6.8 36 3 F phenylalanine 4.0 21 2 G glycine 6.4 34 2 H histidine 1.7 9 1 I isoleucine 5.1 27 2 K lysine 6.8 36 2 L leucine 7.0 37 2 M methionine 2.8 15 2 N asparagine 3.2 17 2 P proline 4.3 23 2 Q glutamine 4.0 21 2 R arginine 10.9 58 3 S serine 10.6 56 2 T threonine 4.2 22 2 V valine 5.1 27 1 W tryptophan 0.4 2 1 Y tyrosine 1.9 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA binding motif protein 39 isoform a RBM39 0.982 RNA binding motif protein 39 isoform b RBM23 0.442 RNA binding motif protein 23 isoform 1 RBM23 0.429 RNA binding motif protein 23 isoform 2 RBM23 0.405 RNA binding motif protein 23 isoform 3 PUF60 0.076 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 0.076 poly-U binding splicing factor 60KDa isoform a [Homo... LEMD3 0.076 LEM domain containing 3 PUF60 0.074 poly-U binding splicing factor 60KDa isoform b [Homo... U2AF2 0.063 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofor... U2AF2 0.062 U2 (RNU2) small nuclear RNA auxiliary factor 2 isofo... PABPC4L 0.061 poly(A) binding protein, cytoplasmic 4-like HNRNPAB 0.057 heterogeneous nuclear ribonucleoprotein A/B isoform ... HNRNPAB 0.057 heterogeneous nuclear ribonucleoprotein A/B isoform ... RSRC2 0.057 arginine/serine-rich coiled-coil 2 isoform b RSRC2 0.057 arginine/serine-rich coiled-coil 2 isoform a HNRPDL 0.057 heterogeneous nuclear ribonucleoprotein D-like [Homo... PABPC4 0.055 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.055 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.055 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... MSI2 0.054 musashi 2 isoform a TIA1 0.054 TIA1 protein isoform 2 TIA1 0.053 TIA1 protein isoform 1 SF3B4 0.053 splicing factor 3b, subunit 4 MSI2 0.053 musashi 2 isoform b TRA2B 0.053 splicing factor, arginine/serine-rich 10 TIAL1 0.052 TIA-1 related protein isoform 1 HNRNPA2B1 0.051 heterogeneous nuclear ribonucleoprotein A2/B1 isofor... PABPC3 0.050 poly(A) binding protein, cytoplasmic 3 CROP 0.050 cisplatin resistance-associated overexpressed protei... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.