TMPO 35396

Name: TMPO	Sequence: fasta or formatted (454aa)		NCBI GI: 73760405
Description: thymopoietin isoform beta		Referenced in: Nucleus and Nucleolus Additional Interaction Domain Families
Other entries for this name: alt prot [694aa] thymopoietin isoform alpha alt prot [345aa] thymopoietin isoform gamma
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 27 4 C cysteine 0.2 1 1 D aspartate 4.8 22 2 E glutamate 9.0 41 2 F phenylalanine 2.9 13 1 G glycine 5.5 25 2 H histidine 1.1 5 1 I isoleucine 3.7 17 1 K lysine 8.1 37 2 L leucine 8.4 38 2 M methionine 1.1 5 1 N asparagine 4.0 18 2 P proline 7.7 35 2 Q glutamine 2.9 13 1 R arginine 8.1 37 2 S serine 9.5 43 3 T threonine 7.5 34 2 V valine 6.8 31 3 W tryptophan 0.4 2 1 Y tyrosine 2.2 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thymopoietin isoform beta TMPO 0.475 thymopoietin isoform gamma TMPO 0.406 thymopoietin isoform alpha LEMD3 0.028 LEM domain containing 3 MAP1B 0.026 microtubule-associated protein 1B LEMD1 0.022 LEM domain containing 1 EMD 0.021 emerin ARL6IP4 0.020 SRp25 nuclear protein isoform 1 NOLC1 0.018 nucleolar and coiled-body phosphoprotein 1 ANKLE2 0.016 ankyrin repeat and LEM domain containing 2 CCNI 0.015 cyclin I ARL6IP4 0.014 SRp25 nuclear protein isoform 3 AP3B2 0.014 adaptor-related protein complex 3, beta 2 subunit [H... BOD1L 0.013 biorientation of chromosomes in cell division 1-like... TTC16 0.013 tetratricopeptide repeat domain 16 SMARCA4 0.013 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.013 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.013 SWI/SNF-related matrix-associated actin-dependent re... LOC727909 0.011 PREDICTED: similar to Golgin subfamily A member 8-l... FXR2 0.011 fragile X mental retardation syndrome related protein... SRRM2 0.011 splicing coactivator subunit SRm300 MUC3A 0.011 PREDICTED: mucin 3A, cell surface associated, parti... LOC100130506 0.011 PREDICTED: hypothetical protein LOC100288911 0.011 PREDICTED: hypothetical protein XP_002342241 ZFP37 0.011 zinc finger protein 37 homolog SMARCA4 0.010 SWI/SNF-related matrix-associated actin-dependent r... LOC643699 0.010 PREDICTED: similar to golgi autoantigen, golgin sub... ANK2 0.010 ankyrin 2 isoform 1 KIAA1704 0.010 hypothetical protein LOC55425 TLE1 0.010 transducin-like enhancer protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.