TMPO 29584

Name: TMPO	Sequence: fasta or formatted (694aa)		NCBI GI: 4507555
Description: thymopoietin isoform alpha		Referenced in: Nucleus and Nucleolus Additional Interaction Domain Families
Other entries for this name: alt prot [345aa] thymopoietin isoform gamma alt prot [454aa] thymopoietin isoform beta
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 54 4 C cysteine 1.4 10 1 D aspartate 5.0 35 2 E glutamate 7.5 52 3 F phenylalanine 2.7 19 2 G glycine 6.2 43 3 H histidine 1.9 13 1 I isoleucine 4.3 30 1 K lysine 7.8 54 3 L leucine 9.5 66 2 M methionine 1.0 7 1 N asparagine 3.2 22 2 P proline 6.3 44 2 Q glutamine 5.0 35 2 R arginine 4.9 34 2 S serine 11.8 82 6 T threonine 6.1 42 3 V valine 5.3 37 2 W tryptophan 0.3 2 1 Y tyrosine 1.9 13 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 thymopoietin isoform alpha TMPO 0.264 thymopoietin isoform gamma TMPO 0.264 thymopoietin isoform beta LEMD1 0.018 LEM domain containing 1 LEMD3 0.018 LEM domain containing 3 EMD 0.013 emerin ZFP37 0.013 zinc finger protein 37 homolog ARL6IP4 0.013 SRp25 nuclear protein isoform 1 CLSPN 0.011 claspin SRRM2 0.010 splicing coactivator subunit SRm300 SNAPC4 0.010 small nuclear RNA activating complex, polypeptide 4,... ANKLE2 0.010 ankyrin repeat and LEM domain containing 2 CEP72 0.010 centrosomal protein 72 kDa CCNI 0.010 cyclin I SPTY2D1 0.010 SPT2, Suppressor of Ty, domain containing 1 BAZ2B 0.009 bromodomain adjacent to zinc finger domain, 2B [Homo... ARL6IP4 0.009 SRp25 nuclear protein isoform 3 TXNDC2 0.008 thioredoxin domain-containing 2 isoform 1 TXNDC2 0.008 thioredoxin domain-containing 2 isoform 2 TXNDC2 0.008 thioredoxin domain-containing 2 isoform 1 SMARCA4 0.007 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.007 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.007 SWI/SNF-related matrix-associated actin-dependent r... SMARCA4 0.007 SWI/SNF-related matrix-associated actin-dependent re... LOC100130506 0.007 PREDICTED: hypothetical protein LOC100288911 0.007 PREDICTED: hypothetical protein XP_002342241 MLLT6 0.007 myeloid/lymphoid or mixed-lineage leukemia (trithora... LARP1 0.007 la related protein isoform 2 LARP1 0.007 la related protein isoform 1 C11orf57 0.007 hypothetical protein LOC55216 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.