TPM3 1401

Name: TPM3	Sequence: fasta or formatted (285aa)		NCBI GI: 114155140
Description: tropomyosin 3 isoform 1		Referenced in: Muscle
Other entries for this name: alt prot [248aa] tropomyosin 3 isoform 4 alt prot [247aa] tropomyosin 3 isoform 3 alt prot [247aa] tropomyosin 3 isoform 5 alt prot [248aa] tropomyosin 3 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.3 38 2 C cysteine 0.4 1 1 D aspartate 6.7 19 2 E glutamate 21.4 61 3 F phenylalanine 0.4 1 1 G glycine 1.1 3 1 H histidine 0.7 2 1 I isoleucine 4.2 12 2 K lysine 13.3 38 3 L leucine 11.9 34 1 M methionine 2.8 8 2 N asparagine 2.5 7 2 P proline 0.0 0 0 Q glutamine 5.3 15 1 R arginine 4.9 14 2 S serine 3.9 11 1 T threonine 2.8 8 1 V valine 2.5 7 1 W tryptophan 0.0 0 0 Y tyrosine 2.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomyosin 3 isoform 1 TPM1 0.923 tropomyosin 1 alpha chain isoform 1 TPM2 0.884 tropomyosin 2 (beta) isoform 1 TPM1 0.866 tropomyosin 1 alpha chain isoform 5 TPM1 0.833 tropomyosin 1 alpha chain isoform 3 TPM4 0.821 tropomyosin 4 isoform 1 TPM1 0.778 tropomyosin 1 alpha chain isoform 4 TPM2 0.772 tropomyosin 2 (beta) isoform 2 TPM1 0.750 tropomyosin 1 alpha chain isoform 2 TPM1 0.695 tropomyosin 1 alpha chain isoform 7 TPM3 0.652 tropomyosin 3 isoform 5 TPM3 0.642 tropomyosin 3 isoform 4 TPM1 0.613 tropomyosin 1 alpha chain isoform 6 TPM3 0.601 tropomyosin 3 isoform 3 TPM4 0.599 tropomyosin 4 isoform 2 TPM3 0.593 tropomyosin 3 isoform 2 TPM2 0.448 tropomyosin 2 (beta) isoform 3 MYH9 0.124 myosin, heavy polypeptide 9, non-muscle LOC400352 0.120 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.120 PREDICTED: similar to Putative golgin subfamily A m... LOC440243 0.118 PREDICTED: Putative golgin subfamily A member 6-lik... LOC645202 0.116 PREDICTED: hypothetical protein LOC645202 WDR87 0.114 NYD-SP11 protein LOC100133220 0.112 PREDICTED: hypothetical protein ERC1 0.106 RAB6-interacting protein 2 isoform epsilon ERC1 0.106 RAB6-interacting protein 2 isoform delta LOC727832 0.104 golgi autoantigen, golgin subfamily a-like MYH11 0.104 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.104 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.104 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.