CCDC110 15624

Name: CCDC110	Sequence: fasta or formatted (833aa)		NCBI GI: 22749515
Description: coiled-coil domain containing 110 isoform a		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [796aa] coiled-coil domain containing 110 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.3 19 2 C cysteine 1.2 10 1 D aspartate 4.3 36 2 E glutamate 12.4 103 2 F phenylalanine 2.8 23 1 G glycine 1.9 16 1 H histidine 3.0 25 2 I isoleucine 6.6 55 3 K lysine 11.4 95 2 L leucine 10.2 85 2 M methionine 2.9 24 2 N asparagine 6.7 56 2 P proline 2.5 21 2 Q glutamine 6.7 56 3 R arginine 3.1 26 2 S serine 10.0 83 2 T threonine 5.8 48 2 V valine 4.2 35 1 W tryptophan 0.0 0 0 Y tyrosine 2.0 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 110 isoform a CCDC110 0.946 coiled-coil domain containing 110 isoform b CENPF 0.050 centromere protein F CCDC88A 0.044 coiled-coil domain containing 88A isoform 1 EEA1 0.044 early endosome antigen 1, 162kD CCDC88A 0.044 coiled-coil domain containing 88A isoform 2 CENPE 0.044 centromere protein E GOLGB1 0.043 golgi autoantigen, golgin subfamily b, macrogolgin ... ROCK2 0.042 Rho-associated, coiled-coil containing protein kinas... MYH9 0.039 myosin, heavy polypeptide 9, non-muscle GCC2 0.038 GRIP and coiled-coil domain-containing 2 TPR 0.037 nuclear pore complex-associated protein TPR CLIP1 0.037 restin isoform a MYH10 0.037 myosin, heavy polypeptide 10, non-muscle CLIP1 0.036 restin isoform b GOLGA4 0.036 golgi autoantigen, golgin subfamily a, 4 DSP 0.036 desmoplakin isoform I HMMR 0.035 hyaluronan-mediated motility receptor isoform d [Ho... CGNL1 0.034 cingulin-like 1 KIF20B 0.034 M-phase phosphoprotein 1 CEP110 0.034 centrosomal protein 110kDa ROCK1 0.034 Rho-associated, coiled-coil containing protein kinase... CCDC18 0.033 sarcoma antigen NY-SAR-41 ERC1 0.033 RAB6-interacting protein 2 isoform delta CCDC41 0.032 NY-REN-58 antigen CCDC41 0.032 NY-REN-58 antigen ANKRD26 0.032 ankyrin repeat domain 26 ERC1 0.032 RAB6-interacting protein 2 isoform epsilon CEP290 0.032 centrosomal protein 290kDa AKAP9 0.032 A-kinase anchor protein 9 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.