CCDC110 14931

Name: CCDC110	Sequence: fasta or formatted (796aa)		NCBI GI: 224586823
Description: coiled-coil domain containing 110 isoform b		Referenced in: Coiled-Coil Proteins
Other entries for this name: alt prot [833aa] coiled-coil domain containing 110 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.4 19 2 C cysteine 1.3 10 1 D aspartate 4.4 35 2 E glutamate 12.2 97 2 F phenylalanine 2.6 21 1 G glycine 1.9 15 1 H histidine 3.1 25 2 I isoleucine 6.3 50 3 K lysine 11.6 92 2 L leucine 10.3 82 2 M methionine 3.0 24 2 N asparagine 6.7 53 2 P proline 2.5 20 2 Q glutamine 6.8 54 3 R arginine 3.1 25 2 S serine 9.8 78 2 T threonine 5.9 47 2 V valine 4.0 32 1 W tryptophan 0.0 0 0 Y tyrosine 2.1 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 coiled-coil domain containing 110 isoform b CCDC110 0.988 coiled-coil domain containing 110 isoform a CENPF 0.054 centromere protein F CCDC88A 0.046 coiled-coil domain containing 88A isoform 1 CCDC88A 0.046 coiled-coil domain containing 88A isoform 2 CENPE 0.045 centromere protein E EEA1 0.044 early endosome antigen 1, 162kD ROCK2 0.044 Rho-associated, coiled-coil containing protein kinas... GOLGB1 0.042 golgi autoantigen, golgin subfamily b, macrogolgin ... MYH9 0.041 myosin, heavy polypeptide 9, non-muscle CLIP1 0.038 restin isoform b CLIP1 0.038 restin isoform a GOLGA4 0.037 golgi autoantigen, golgin subfamily a, 4 DSP 0.037 desmoplakin isoform I GCC2 0.037 GRIP and coiled-coil domain-containing 2 HMMR 0.037 hyaluronan-mediated motility receptor isoform a [Ho... HMMR 0.037 hyaluronan-mediated motility receptor isoform d [Ho... CEP290 0.036 centrosomal protein 290kDa CGNL1 0.036 cingulin-like 1 KIF20B 0.036 M-phase phosphoprotein 1 CEP110 0.036 centrosomal protein 110kDa ROCK1 0.035 Rho-associated, coiled-coil containing protein kinase... CCDC41 0.034 NY-REN-58 antigen CCDC41 0.034 NY-REN-58 antigen AKAP9 0.034 A-kinase anchor protein 9 isoform 2 ERC1 0.033 RAB6-interacting protein 2 isoform delta AKAP9 0.033 A-kinase anchor protein 9 isoform 3 MYO18A 0.033 myosin 18A isoform b MYO18A 0.033 myosin 18A isoform a CCDC18 0.033 sarcoma antigen NY-SAR-41 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.