Guide to the Human Genome
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Name: C1orf124 Sequence: fasta or formatted (489aa) NCBI GI: 58331105
Description:

hypothetical protein LOC83932 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {250aa} hypothetical protein LOC83932 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         24           2
 C cysteine            2.0         10           1
 D aspartate           4.7         23           3
 E glutamate           7.2         35           2
 F phenylalanine       3.3         16           2
 G glycine             5.5         27           2
 H histidine           3.5         17           1
 I isoleucine          3.7         18           1
 K lysine              7.8         38           2
 L leucine             7.6         37           2
 M methionine          1.6          8           1
 N asparagine          7.0         34           2
 P proline             5.1         25           2
 Q glutamine           4.5         22           1
 R arginine            4.9         24           2
 S serine             11.5         56           6
 T threonine           4.1         20           3
 V valine              6.7         33           1
 W tryptophan          1.8          9           2
 Y tyrosine            2.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC83932 isoform a 
C1orf124              0.501   hypothetical protein LOC83932 isoform b 
RAD18                 0.018   postreplication repair protein hRAD18p 
KIAA0232              0.014   hypothetical protein LOC9778 
KIAA0232              0.014   hypothetical protein LOC9778 
WRNIP1                0.010   Werner helicase interacting protein isoform 2 
WRNIP1                0.010   Werner helicase interacting protein isoform 1 
ZNF532                0.009   zinc finger protein 532 
OSBPL5                0.009   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.009   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.009   oxysterol-binding protein-like protein 5 isoform b [...
DIP2B                 0.009   DIP2 disco-interacting protein 2 homolog B 
POLK                  0.008   DNA-directed DNA polymerase kappa 
UIMC1                 0.008   ubiquitin interaction motif containing 1 
AFF4                  0.008   ALL1 fused gene from 5q31 
SRRM2                 0.007   splicing coactivator subunit SRm300 
THRAP3                0.007   thyroid hormone receptor associated protein 3 [Homo...
SP4                   0.006   Sp4 transcription factor 
CCNB3                 0.006   cyclin B3 isoform 3 
LIMCH1                0.006   LIM and calponin homology domains 1 isoform e [Homo...
LIMCH1                0.006   LIM and calponin homology domains 1 isoform d [Homo...
LIMCH1                0.006   LIM and calponin homology domains 1 isoform c [Homo...
LIMCH1                0.006   LIM and calponin homology domains 1 isoform b [Homo...
LIMCH1                0.006   LIM and calponin homology domains 1 isoform a [Homo...
SPTBN5                0.006   spectrin, beta, non-erythrocytic 5 
ATF7IP2               0.006   activating transcription factor 7 interacting protei...
KIAA0240              0.006   hypothetical protein LOC23506 
FAM83B                0.006   hypothetical protein LOC222584 
DTL                   0.005   denticleless homolog 
ARHGAP24              0.005   Rho GTPase activating protein 24 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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