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Search of human proteins with 7669481
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7669481 BCL2/adenovirus E1B 19kD-interacting protein 3 [Homo
sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7669481 BCL2/adenovirus E1B 19kD-interacting protein 3 [Homo ... 393 e-110
gi|4757860 BCL2/adenovirus E1B 19kD-interacting protein 3-like [... 214 5e-56
gi|60097902 filaggrin [Homo sapiens] 33 0.15
gi|34577114 cytomatrix protein p110 [Homo sapiens] 32 0.26
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 32 0.44
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 32 0.44
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 31 0.76
gi|13994268 ubiquitin-specific protease 26 [Homo sapiens] 31 0.76
gi|118197272 ATG2 autophagy related 2 homolog B [Homo sapiens] 31 0.76
gi|133778961 testis expressed 15 [Homo sapiens] 31 0.76
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 30 0.99
gi|214010175 CLIP-associating protein 1 isoform 3 [Homo sapiens] 30 0.99
gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens] 30 0.99
gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens] 30 0.99
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 30 0.99
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 30 0.99
gi|38327039 heat shock 70kDa protein 4 [Homo sapiens] 30 1.3
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 30 1.3
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 30 1.3
gi|110349797 homer 2 isoform 4 [Homo sapiens] 30 1.3
gi|62988361 absent in melanoma 1 [Homo sapiens] 30 1.3
gi|170932473 zinc finger protein 786 [Homo sapiens] 30 1.3
gi|25777643 potassium intermediate/small conductance calcium-act... 30 1.3
gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] 30 1.3
gi|15559211 RE1-silencing transcription factor [Homo sapiens] 30 1.7
gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens] 30 1.7
gi|122891862 DENN/MADD domain containing 5B [Homo sapiens] 29 2.2
gi|50962882 G patch domain containing 8 [Homo sapiens] 29 2.2
gi|163965441 hypothetical protein LOC149499 [Homo sapiens] 29 2.2
gi|117676384 splicing factor, arginine/serine-rich 2, interactin... 29 2.9
>gi|7669481 BCL2/adenovirus E1B 19kD-interacting protein 3 [Homo
sapiens]
Length = 194
Score = 393 bits (1009), Expect = e-110
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MSQNGAPGMQEESLQGSWVELHFSNNGNGGSVPASVSIYNGDMEKILLDAQHESGRSSSK 60
MSQNGAPGMQEESLQGSWVELHFSNNGNGGSVPASVSIYNGDMEKILLDAQHESGRSSSK
Sbjct: 1 MSQNGAPGMQEESLQGSWVELHFSNNGNGGSVPASVSIYNGDMEKILLDAQHESGRSSSK 60
Query: 61 SSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNSDWIWDW 120
SSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNSDWIWDW
Sbjct: 61 SSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNSDWIWDW 120
Query: 121 SSRPENIPPKEFLFKHPKRTATLSMRNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLG 180
SSRPENIPPKEFLFKHPKRTATLSMRNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLG
Sbjct: 121 SSRPENIPPKEFLFKHPKRTATLSMRNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLG 180
Query: 181 IYIGRRLTTSTSTF 194
IYIGRRLTTSTSTF
Sbjct: 181 IYIGRRLTTSTSTF 194
>gi|4757860 BCL2/adenovirus E1B 19kD-interacting protein 3-like
[Homo sapiens]
Length = 219
Score = 214 bits (544), Expect = 5e-56
Identities = 118/193 (61%), Positives = 145/193 (75%), Gaps = 17/193 (8%)
Query: 14 LQGSWVELHFSN-----NGNGGS-----VPASVSIYNGDMEKILLDAQHESGRSSSK-SS 62
L SWVEL ++ NGNG + VP+S SI+NGDMEKILLDAQHESG+SSS+ SS
Sbjct: 32 LNSSWVELPMNSSNGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSS 91
Query: 63 HCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNSDWIWDWSS 122
HCDSP +PQ+ + +SSQSEE+ +E KEVE+ LKK++DW+ DWSS
Sbjct: 92 HCDSP----SPQEDGQIMFDVEMHTSRDHSSQSEEEVVEGEKEVEA-LKKSADWVSDWSS 146
Query: 123 RPENIPPKEFLFKHPKRTATLSMRNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLGIY 182
RPENIPPKEF F+HPKR+ +LSMR + MKKGGIFSAEFLKVF+PSL LSH+LA+GLGIY
Sbjct: 147 RPENIPPKEFHFRHPKRSVSLSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIY 206
Query: 183 IGRRLTT-STSTF 194
IG+RL+T S ST+
Sbjct: 207 IGKRLSTPSASTY 219
>gi|60097902 filaggrin [Homo sapiens]
Length = 4061
Score = 33.1 bits (74), Expect = 0.15
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 21/125 (16%)
Query: 5 GAPGMQEESLQGSWVELHFSNNGNGGSVPA------------------SVSIYNGDMEKI 46
G PG + QGS+ E +G+ GS + S S + E+
Sbjct: 3760 GHPGSRRGGRQGSYHEQSVDRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRETRNEEQS 3819
Query: 47 LLDAQHESGRSSSKSSHCDSPPRSQTPQDT---NRASETDTHSIGEKNSSQSEEDDIERR 103
++H R S+ DS SQ+ Q +R S S+ + + S++ +D ERR
Sbjct: 3820 GDGSRHSGSRHHEASTQADSSRHSQSGQGESAGSRRSRRQGSSVSQDSDSEAYPEDSERR 3879
Query: 104 KEVES 108
E S
Sbjct: 3880 SESAS 3884
Score = 32.3 bits (72), Expect = 0.26
Identities = 29/119 (24%), Positives = 42/119 (35%), Gaps = 21/119 (17%)
Query: 5 GAPGMQEESLQGSWVELHFSNNGNGGSVPA------------------SVSIYNGDMEKI 46
G PG QGS E +G+ GS + S S + E+
Sbjct: 843 GHPGSSRRGRQGSHHEQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQS 902
Query: 47 LLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTH---SIGEKNSSQSEEDDIER 102
++H R SSH D SQ Q + S T S+ + + S+ +D ER
Sbjct: 903 RDGSRHSGSRHHEASSHADISRHSQAGQGQSEGSRTSRRQGSSVSQDSDSEGHSEDSER 961
Score = 32.0 bits (71), Expect = 0.34
Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 21/119 (17%)
Query: 5 GAPGMQEESLQGSWVELHFSNNGNGGSVPA------------------SVSIYNGDMEKI 46
G PG QGS E ++G+ GS + SVS + ++
Sbjct: 1815 GHPGSSRGGRQGSHYEQSVDSSGHSGSHHSHTTSQERSDVSRGQSGSRSVSRQTRNEKQS 1874
Query: 47 LLDAQHESGRSSSKSSHCDSPPRSQTPQDTN---RASETDTHSIGEKNSSQSEEDDIER 102
++H R SS DS SQ Q + R S S+ + + SQ +D ER
Sbjct: 1875 GDGSRHSGSRHHEASSRADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGHSEDSER 1933
Score = 30.8 bits (68), Expect = 0.76
Identities = 30/119 (25%), Positives = 42/119 (35%), Gaps = 21/119 (17%)
Query: 5 GAPGMQEESLQGSWVELHFSNNGNGGSVPA------------------SVSIYNGDMEKI 46
G PG QGS E + +G+ GS + S S + E+
Sbjct: 518 GHPGSSRGGRQGSHHEQSVNRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRNEEQS 577
Query: 47 LLDAQHESGRSSSKSSHCDSPPRSQTPQDTN---RASETDTHSIGEKNSSQSEEDDIER 102
+H R SS DS SQ Q + R S S+ + + SQ +D ER
Sbjct: 578 GDGTRHSGSRHHEASSQADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGHSEDSER 636
Score = 28.9 bits (63), Expect = 2.9
Identities = 29/120 (24%), Positives = 42/120 (35%), Gaps = 21/120 (17%)
Query: 4 NGAPGMQEESLQGSWVELHFSNNGNGGSVPA------------------SVSIYNGDMEK 45
+G PG QGS E +G+ GS + S S + E+
Sbjct: 2463 HGHPGSSSGGRQGSHYEQLVDRSGHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQ 2522
Query: 46 ILLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTH---SIGEKNSSQSEEDDIER 102
++H R SS DS SQ Q + T + S + + SQ +D ER
Sbjct: 2523 SGDGSRHSGSRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSSFSQDSDSQGHSEDSER 2582
Score = 28.1 bits (61), Expect = 4.9
Identities = 28/119 (23%), Positives = 42/119 (35%), Gaps = 21/119 (17%)
Query: 5 GAPGMQEESLQGSWVELHFSNNGNGGSVPA------------------SVSIYNGDMEKI 46
G PG QGS E +G+ GS + S S + E+
Sbjct: 3436 GHPGSSRRGRQGSHYEQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQTRNDEQS 3495
Query: 47 LLDAQHESGRSSSKSSHCDSPPRSQTPQDTN---RASETDTHSIGEKNSSQSEEDDIER 102
++H S+ DS SQ+ Q + R S S+ + + SQ +D ER
Sbjct: 3496 GDGSRHSWSHHHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSER 3554
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 32.3 bits (72), Expect = 0.26
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 49 DAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVES 108
D Q + + KS DS + T T + ++ I E+ Q E DD ER +E+ES
Sbjct: 559 DKQLTNLKDRVKSLQTDSS-NTDTALATLEEALSEKERIIERLKEQRERDDRERLEEIES 617
Query: 109 ILKKNSDWIWDWSSRPENIPPKEF----LFKHPKRTATLSMRNTSVMK 152
K+N D ++ + KE L +H A+ ++ S +K
Sbjct: 618 FRKENKDLKEKVNALQAELTEKESSLIDLKEHASSLASAGLKRDSKLK 665
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 31.6 bits (70), Expect = 0.44
Identities = 16/72 (22%), Positives = 33/72 (45%)
Query: 44 EKILLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERR 103
E+I L+ + RSS S + + +T + +D +N + E+D+E
Sbjct: 153 ERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEED 212
Query: 104 KEVESILKKNSD 115
+EVE +++ +
Sbjct: 213 EEVEEDAEEDEE 224
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 31.6 bits (70), Expect = 0.44
Identities = 16/72 (22%), Positives = 33/72 (45%)
Query: 44 EKILLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERR 103
E+I L+ + RSS S + + +T + +D +N + E+D+E
Sbjct: 153 ERIGLEVDRRASRSSQSSKEEVNSEEYGSDHETGSSGSSDEQGNNTENEEEGVEEDVEED 212
Query: 104 KEVESILKKNSD 115
+EVE +++ +
Sbjct: 213 EEVEEDAEEDEE 224
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 30.8 bits (68), Expect = 0.76
Identities = 28/115 (24%), Positives = 42/115 (36%), Gaps = 32/115 (27%)
Query: 53 ESGRSSSKSSHCDSPPRSQTPQDTNRASETDTH------------------SIGEKNSSQ 94
+S S S SS D PP++Q P+ T + T S +SS
Sbjct: 165 KSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSS 224
Query: 95 SEEDDIERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFKHPKRTATLSMRNTS 149
S DD E K ++ + +P K+ + K P + AT R +S
Sbjct: 225 SSSDDSEEEKAA--------------ATPKKTVPKKQVVAKAPVKAATTPTRKSS 265
Score = 28.9 bits (63), Expect = 2.9
Identities = 29/127 (22%), Positives = 45/127 (35%), Gaps = 9/127 (7%)
Query: 29 GGSVPAS-VSIYNGDMEKILLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSI 87
GG+ P+ S G E + +S + PR Q P+ ++ T +
Sbjct: 499 GGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGK 558
Query: 88 GEKNSSQSEEDDIERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFKHPKRTATLSMRN 147
KNS + EE E++K + K S R +N KE K+ +
Sbjct: 559 AAKNSEEEEE---EKKKAAVVVSKSGS-----LKKRKQNEAAKEAETPQAKKIKLQTPNT 610
Query: 148 TSVMKKG 154
KKG
Sbjct: 611 FPKRKKG 617
>gi|13994268 ubiquitin-specific protease 26 [Homo sapiens]
Length = 913
Score = 30.8 bits (68), Expect = 0.76
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 12 ESLQGSWVELHFSNNGNGGSVPASVSIYNGDMEKILLDAQHESG-RSSSKSSHCDSPPRS 70
+S +G+ LH + N G +S + + KI LD H++ + + S S
Sbjct: 62 KSYRGNQNHLHLTLQNNNGLFIEGLSSTDAEQLKIFLDRVHQNEVQPPVRPGKGGSVFSS 121
Query: 71 QTPQDTNRASETDTHSIGEKNSSQSEE 97
T ++ N+ T H + EK+SS+S E
Sbjct: 122 TTQKEINK---TSFHKVDEKSSSKSFE 145
>gi|118197272 ATG2 autophagy related 2 homolog B [Homo sapiens]
Length = 2078
Score = 30.8 bits (68), Expect = 0.76
Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 9 MQEESLQGSWVELHFSNNGNGGSVPASVSIYNGDMEKILLDAQHESGRSSSKSSHCDSPP 68
+Q+E L ++ +L F GGS P + + +++ Q E G S K H S
Sbjct: 775 LQKEILYLAFTDLEFKTEFIGGSTPEQIKL-ELTFRELIGSFQEEKGDPSIKFFHVSSGV 833
Query: 69 RSQT--------PQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVE 107
T P+ + + HSI E+ +++ EE++ +E E
Sbjct: 834 DGDTTSSDDFDWPRIVLKINPPAMHSILERIAAEEEEENDGHYQEEE 880
>gi|133778961 testis expressed 15 [Homo sapiens]
Length = 2789
Score = 30.8 bits (68), Expect = 0.76
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 49 DAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVES 108
D H S +S+S + P T D +R T S+++ +D + +KEVES
Sbjct: 865 DVNHTSENQNSESLFTE-PSNVTTIDDGSRCFFT---------KSKTDYNDTKNKKEVES 914
Query: 109 ILKKNSDWIWDWSSRPENIPPKE 131
+ K I SSR +NIP K+
Sbjct: 915 RISKRKLHI---SSRDQNIPHKD 934
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 30.4 bits (67), Expect = 0.99
Identities = 24/110 (21%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 53 ESGRSSSKSSHCDSPPRS-QTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILK 111
E + + + ++P R+ + D N +E + E+ + EEDD E + E
Sbjct: 241 EGSQPAEEEEDQETPSRNLRVRADRNLKTEEE-----EEEEEEEEEDDEEEEGDDEGQKS 295
Query: 112 KNSDWIWDWSSRPENIP---PKEFLFKHPKRTATLSMRNTSVMKKGGIFS 158
+ + + ++ E IP P+E + + PK + + V+++GG F+
Sbjct: 296 REAPILKEFKEEGEEIPRVKPEEMMDERPKTRS----QEQEVLERGGRFT 341
>gi|214010175 CLIP-associating protein 1 isoform 3 [Homo sapiens]
Length = 1471
Score = 30.4 bits (67), Expect = 0.99
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 53 ESGRSSSKSSHCDSPP----RSQTPQDTNRASETDTHSIGEKNSSQSEEDDIE 101
+S RSSS S + P RS T T+RAS T S+ S Q DI+
Sbjct: 551 QSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDID 603
>gi|214010173 CLIP-associating protein 1 isoform 2 [Homo sapiens]
Length = 1479
Score = 30.4 bits (67), Expect = 0.99
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 53 ESGRSSSKSSHCDSPP----RSQTPQDTNRASETDTHSIGEKNSSQSEEDDIE 101
+S RSSS S + P RS T T+RAS T S+ S Q DI+
Sbjct: 551 QSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDID 603
>gi|31563537 CLIP-associating protein 1 isoform 1 [Homo sapiens]
Length = 1538
Score = 30.4 bits (67), Expect = 0.99
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Query: 53 ESGRSSSKSSHCDSPP----RSQTPQDTNRASETDTHSIGEKNSSQSEEDDIE 101
+S RSSS S + P RS T T+RAS T S+ S Q DI+
Sbjct: 551 QSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSVSTTGSLQRSRSDID 603
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo
sapiens]
Length = 2365
Score = 30.4 bits (67), Expect = 0.99
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 51 QHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVE 107
Q E+ R+SS D+P S T +DT RAS T ++ + S+S + D R +
Sbjct: 306 QQETSRASSTQE--DTPRASSTQEDTPRASSTQWNTPRASSPSRSTQLDNPRTSSTQ 360
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 30.4 bits (67), Expect = 0.99
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Query: 35 SVSIYNGDMEKILLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRA---SETDTHSIGEKN 91
S S + D E+ ++ S SSS SH S S + + A S + T S +
Sbjct: 2130 SSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSS 2189
Query: 92 SSQSEEDDIERRK 104
SS SEE D + +
Sbjct: 2190 SSSSEESDSDEEE 2202
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 24 SNNGNGGSVPASVSIYNGDMEKILLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETD 83
S++ + S +S S + + SG SSS SS C S S + ++ +S +
Sbjct: 2131 SSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSS 2190
Query: 84 THSIGEKNSSQSEEDDIERRK 104
+ S S S+E++ ++R+
Sbjct: 2191 SSS----EESDSDEEEAQKRE 2207
Score = 27.7 bits (60), Expect = 6.4
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 55 GRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNS 114
G +SS+ S +P S T +E+ I K+ ++ DD +RK++E LK++
Sbjct: 2442 GLTSSQISTGINPALSYTQPQGIPDTESPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHP 2501
Query: 115 DWIWD 119
++ D
Sbjct: 2502 GYVED 2506
>gi|38327039 heat shock 70kDa protein 4 [Homo sapiens]
Length = 840
Score = 30.0 bits (66), Expect = 1.3
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 63 HCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNSDWIWDWSS 122
H D+ ++ + TN A E + + +N D + + KE+E+ +K+ + S
Sbjct: 725 HLDAADMTKVEKSTNEAMEWMNNKLNLQNKQSLTMDPVVKSKEIEAKIKELTSTCSPIIS 784
Query: 123 RPEN--IPPKE 131
+P+ PPKE
Sbjct: 785 KPKPKVEPPKE 795
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 61 SSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNSDWIWDW 120
SS PP ++ S +D+ S + ++ SEE+ +R E++ LK + +
Sbjct: 469 SSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAAL 528
Query: 121 SSRPENIPPKEFLFKHPKR 139
S +N P K+ K K+
Sbjct: 529 SQPQQNKPKKKEKDKKEKK 547
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 30.0 bits (66), Expect = 1.3
Identities = 20/79 (25%), Positives = 36/79 (45%)
Query: 61 SSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNSDWIWDW 120
SS PP ++ S +D+ S + ++ SEE+ +R E++ LK + +
Sbjct: 469 SSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEEERAQRLAELQEQLKAVHEQLAAL 528
Query: 121 SSRPENIPPKEFLFKHPKR 139
S +N P K+ K K+
Sbjct: 529 SQPQQNKPKKKEKDKKEKK 547
>gi|110349797 homer 2 isoform 4 [Homo sapiens]
Length = 299
Score = 30.0 bits (66), Expect = 1.3
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 44 EKILLDAQH--ESGRSSSKSSHC-------DSPPRSQTPQDTNRASETDTHSIGEKNSSQ 94
EKI + H ESGR + S+ D P +T+ SE D I S+
Sbjct: 119 EKIETSSNHSQESGRETPSSTQASSVNGTDDEKASHAGPANTHLKSENDKLKIALTQSAA 178
Query: 95 SEEDDIERRKEVESILKK 112
+ +++I R KE + LK+
Sbjct: 179 NVKNEINREKEKNTQLKR 196
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 30.0 bits (66), Expect = 1.3
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 54 SGRSSSKS-SHCDS-PPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILK 111
+ SS KS SH + P + +T +D + S S+ + DD+E+ +ES++K
Sbjct: 911 TSHSSLKSPSHMEKYPQKEKTKEDLDSRSNLHLPETKFSELSKLKNDDMEKANHIESVIK 970
Query: 112 KN 113
N
Sbjct: 971 SN 972
>gi|170932473 zinc finger protein 786 [Homo sapiens]
Length = 782
Score = 30.0 bits (66), Expect = 1.3
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 50 AQHESGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSI 87
A GR +S S H P S+ PQ+ N E DT ++
Sbjct: 324 ASWREGRGASSSVHSGQKPGSRLPQEGNSHQEGDTEAL 361
>gi|25777643 potassium intermediate/small conductance
calcium-activated channel, subfamily N, member 1 [Homo
sapiens]
Length = 543
Score = 30.0 bits (66), Expect = 1.3
Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 22/160 (13%)
Query: 39 YNGDMEKILLDAQHESGRS--SSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSE 96
YNG + + L GR ++ H PP S Q SE S G +
Sbjct: 6 YNGSVGRPLGSGPGALGRDPPDPEAGHPPQPPHSPGLQVVVAKSEPARPSPGSPRGQPQD 65
Query: 97 EDDIERRKEVESILKKNSDWIWDWSSRPENI----PPKEFLFKHPKRTATLSM------- 145
+DD E +E E+ ++ S +P N+ + LF+ KR + ++
Sbjct: 66 QDDDEDDEEDEAGRQRA-------SGKPSNVGHRLGHRRALFEKRKRLSDYALIFGMFGI 118
Query: 146 --RNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLGIYI 183
T G+++ E L F L+S AI LG+ +
Sbjct: 119 VVMVTETELSWGVYTKESLYSFALKCLISLSTAILLGLVV 158
>gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]
Length = 170
Score = 30.0 bits (66), Expect = 1.3
Identities = 19/78 (24%), Positives = 33/78 (42%)
Query: 54 SGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKN 113
S SSS SS DS S+ ++ + ++DT +SS + + +S +
Sbjct: 89 SSSSSSDSSASDSSSESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSSS 148
Query: 114 SDWIWDWSSRPENIPPKE 131
S S ++ PPK+
Sbjct: 149 SSSSTSTDSSSDDEPPKK 166
>gi|15559211 RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 29.6 bits (65), Expect = 1.7
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 76 TNRASETDTHSIGEKNSSQSEEDDIERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFK 135
+ R E D+HS+ EE +++K+VES K NS + S+ E + K
Sbjct: 519 SKRKLEVDSHSL--HGPVNDEESSTKKKKKVESKSKNNSQEVPKGDSKVEENKKQNTCMK 576
Query: 136 HPKRTATLSMRNTSVMKK 153
+ TL +++ K
Sbjct: 577 KSTKKKTLKNKSSKKSSK 594
>gi|87116683 proline/serine-rich coiled-coil 2 [Homo sapiens]
Length = 1989
Score = 29.6 bits (65), Expect = 1.7
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 54 SGRSSSKSSHCDSPPRSQTPQDTNRASETDTHSIGEKNS-SQSEEDDIERRKEVESILK- 111
SG SSS+S SPPR + S +S +N ++ ED + + K+++ L+
Sbjct: 182 SGFSSSQSWREPSPPRKSSKSFGRSPSRKQNYSSKNENCVEETFEDLLLKYKQIQLELEC 241
Query: 112 KNSDWIWDWSSRPENI--PPKEFLFKHPKRTATLSMRNTS 149
N D SS+ EN+ PK F+ T +S+ S
Sbjct: 242 INKDEKLALSSKEENVQEDPKTLNFEDQTSTDNVSITKDS 281
>gi|122891862 DENN/MADD domain containing 5B [Homo sapiens]
Length = 1274
Score = 29.3 bits (64), Expect = 2.2
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 38 IYNGDMEKILLDAQHESGRSSSKSSHCDSPPRSQTPQDTNRASETD-THSIGEKNSSQSE 96
I +G +E+IL+ S C +PP+ ++P R S T T + N+ Q +
Sbjct: 1034 IDDGSLERILIGELMTSASDEDLVKQCRTPPQQKSPTTARRLSITSLTGKNNKPNAGQIQ 1093
Query: 97 E 97
E
Sbjct: 1094 E 1094
>gi|50962882 G patch domain containing 8 [Homo sapiens]
Length = 1502
Score = 29.3 bits (64), Expect = 2.2
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 20/101 (19%)
Query: 2 SQNGAPGMQEESLQGSWVELHFSNNGNGGSVPASVSIYNGDMEKILLDAQHESG-RSSSK 60
++ G+ G ++E GS + H G P+S Q +G + SS+
Sbjct: 761 AEEGSSGKKDEGGGGSSSQDHGGRKHKGELPPSS--------------CQRRAGTKRSSR 806
Query: 61 SSHCDSPPRSQTPQDTNRASETDTHSIGEKNSSQSEEDDIE 101
SSH RSQ + + +H + +K+ SQ E++ E
Sbjct: 807 SSH-----RSQPSSGDEDSDDASSHRLHQKSPSQYSEEEEE 842
>gi|163965441 hypothetical protein LOC149499 [Homo sapiens]
Length = 559
Score = 29.3 bits (64), Expect = 2.2
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 42 DMEKILLD-AQHESGRSSSKSSHCDSPP---RSQTPQDTNRASETDTHSIGEKNSSQSEE 97
+ ++LL+ E RS S S H DS +SQ +N A T +K +
Sbjct: 316 ERRRLLLEKGTQERSRSPSSSRHGDSKTDREKSQMVGISNSALVDKT----DKTQTMKTP 371
Query: 98 DDIERRKEVESILKKNSDWIWDWSSRPENIPPKEFLFKHPKRTATLSMRNTSVMKKGGIF 157
+ ++KE L K + + S + P KE K K T+ + S K I
Sbjct: 372 KGLGKKKEKSWELAKKEEKLGSGQSPTQGTPKKEDATKAGKGKVTIPEQKPSRAKGIKIG 431
Query: 158 SAEFLKVFLPSLLL 171
S E + L S L+
Sbjct: 432 SREKRSILLESELV 445
>gi|117676384 splicing factor, arginine/serine-rich 2, interacting
protein [Homo sapiens]
Length = 1463
Score = 28.9 bits (63), Expect = 2.9
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 10/68 (14%)
Query: 49 DAQHESGRSSSKSSHCDSPPRSQTPQDTNRAS-ETDTHSIGEKNSSQSEEDDIER---RK 104
D ES RS S S PR +T ++ R+ S GEK+ SQS E + +R R+
Sbjct: 870 DTTRESRRSESLS------PRRETSRENKRSQPRVKDSSPGEKSRSQSRERESDRDGQRR 923
Query: 105 EVESILKK 112
E E +K
Sbjct: 924 ERERRTRK 931
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,886,025
Number of Sequences: 37866
Number of extensions: 338208
Number of successful extensions: 1673
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 1561
Number of HSP's gapped (non-prelim): 173
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.