Guide to the Human Genome
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Name: REST Sequence: fasta or formatted (1097aa) NCBI GI: 15559211
Description:

RE1-silencing transcription factor

Referenced in:

LIM Domain Proteins
Neurons
Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         67           2
 C cysteine            2.2         24           2
 D aspartate           4.3         47           2
 E glutamate          10.8        119           2
 F phenylalanine       1.6         18           2
 G glycine             5.3         58           4
 H histidine           3.5         38           2
 I isoleucine          2.4         26           2
 K lysine             10.1        111           5
 L leucine             5.7         62           2
 M methionine          3.3         36           1
 N asparagine          4.7         52           2
 P proline             8.4         92           4
 Q glutamine           5.1         56           1
 R arginine            3.7         41           1
 S serine              8.6         94           3
 T threonine           4.6         51           2
 V valine              7.4         81           2
 W tryptophan          0.2          2           1
 Y tyrosine            2.0         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RE1-silencing transcription factor 
ZNF454                0.059   zinc finger protein 454 
ZNF407                0.059   zinc finger protein 407 isoform 2 
ZNF407                0.059   zinc finger protein 407 isoform 1 
ZNF568                0.058   zinc finger protein 568 
ZNF782                0.058   zinc finger protein 782 
ZNF560                0.056   zinc finger protein 560 
ZNF845                0.056   zinc finger protein 845 
ZNF83                 0.056   zinc finger protein 83 isoform b 
ZNF83                 0.056   zinc finger protein 83 isoform b 
ZNF510                0.055   zinc finger protein 510 
ZNF502                0.055   zinc finger protein 502 
ZNF502                0.055   zinc finger protein 502 
ZNF502                0.055   zinc finger protein 502 
ZNF502                0.055   zinc finger protein 502 
ZSCAN22               0.055   zinc finger and SCAN domain containing 22 
ZNF418                0.055   zinc finger protein 418 
ZNF425                0.055   zinc finger protein 425 
ZNF320                0.055   zinc finger protein 320 
ZNF33B                0.055   zinc finger protein 33B 
ZNF675                0.055   zinc finger protein 675 
ZNF808                0.055   zinc finger protein 808 
ZNF471                0.054   zinc finger protein 471 
ZNF184                0.054   zinc finger protein 184 
ZNF468                0.054   zinc finger protein ZNF468 isoform 1 
ZFP2                  0.054   zinc finger protein 2 homolog 
ZNF468                0.054   zinc finger protein ZNF468 isoform 2 
ZNF814                0.054   zinc finger protein 814 
ZNF643                0.054   zinc finger protein 643 
ZNF606                0.054   zinc finger protein 606 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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