Guide to the Human Genome
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Name: USP26 Sequence: fasta or formatted (913aa) NCBI GI: 13994268
Description:

ubiquitin-specific protease 26

Referenced in:

Ubiquitin and Related Protein Modifications

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.6         42           3
 C cysteine            2.4         22           1
 D aspartate           4.7         43           2
 E glutamate           7.7         70           2
 F phenylalanine       4.9         45           2
 G glycine             5.1         47           2
 H histidine           2.5         23           1
 I isoleucine          5.1         47           2
 K lysine             10.6         97           3
 L leucine            10.8         99           3
 M methionine          1.9         17           1
 N asparagine          5.9         54           3
 P proline             4.1         37           2
 Q glutamine           5.1         47           3
 R arginine            3.9         36           2
 S serine              8.3         76           4
 T threonine           4.8         44           2
 V valine              4.1         37           2
 W tryptophan          0.5          5           1
 Y tyrosine            2.7         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ubiquitin-specific protease 26 
USP29                 0.380   ubiquitin specific peptidase 29 
USP37                 0.330   ubiquitin specific peptidase 37 
USP12                 0.025   ubiquitin thiolesterase 12 
USP19                 0.024   ubiquitin thioesterase 19 
USP8                  0.024   ubiquitin specific peptidase 8 
USP8                  0.024   ubiquitin specific peptidase 8 
USP8                  0.024   ubiquitin specific peptidase 8 
USP21                 0.023   ubiquitin-specific protease 21 
USP21                 0.023   ubiquitin-specific protease 21 
USP50                 0.022   ubiquitin specific protease 50 
USP2                  0.022   ubiquitin specific peptidase 2 isoform b 
USP2                  0.022   ubiquitin specific peptidase 2 isoform a 
USP46                 0.021   ubiquitin specific peptidase 46 isoform 2 
USP46                 0.021   ubiquitin specific peptidase 46 isoform 1 
USP6                  0.020   ubiquitin specific protease 6 
USP32                 0.019   ubiquitin specific protease 32 
USP3                  0.018   ubiquitin thiolesterase 3 
USP42                 0.018   ubiquitin specific peptidase 42 
USP36                 0.017   ubiquitin specific peptidase 36 
USP22                 0.017   ubiquitin thiolesterase 22 
USP51                 0.017   ubiquitin specific protease 51 
USP30                 0.017   ubiquitin specific peptidase 30 
USP11                 0.016   ubiquitin specific peptidase 11 
USP43                 0.015   ubiquitin specific protease 43 
USP15                 0.014   ubiquitin specific peptidase 15 
USP27X                0.014   X-linked ubiquitin thioesterase 27 
USP31                 0.013   ubiquitin specific peptidase 31 
LOC728379             0.013   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
LOC728373             0.013   PREDICTED: similar to deubiquitinating enzyme DUB1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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