Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: BNIP3L Sequence: fasta or formatted (219aa) NCBI GI: 4757860
Description:

BCL2/adenovirus E1B 19kD-interacting protein 3-like

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.7          8           1
 C cysteine            0.9          2           1
 D aspartate           4.1          9           1
 E glutamate           9.1         20           3
 F phenylalanine       3.2          7           1
 G glycine             7.8         17           2
 H histidine           5.0         11           1
 I isoleucine          3.7          8           1
 K lysine              5.5         12           2
 L leucine             7.8         17           2
 M methionine          3.2          7           1
 N asparagine          6.8         15           5
 P proline             7.8         17           4
 Q glutamine           2.7          6           1
 R arginine            3.2          7           1
 S serine             16.9         37           4
 T threonine           1.4          3           1
 V valine              5.0         11           2
 W tryptophan          1.4          3           1
 Y tyrosine            0.9          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2/adenovirus E1B 19kD-interacting protein 3-like [... 
BNIP3                 0.444   BCL2/adenovirus E1B 19kD-interacting protein 3 
UNC13A                0.026   unc-13 homolog A 
DSPP                  0.023   dentin sialophosphoprotein preproprotein 
RBBP6                 0.021   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.021   retinoblastoma-binding protein 6 isoform 1 
NR1D2                 0.019   nuclear receptor subfamily 1, group D, member 2 iso...
FLG                   0.016   filaggrin 
SRRT                  0.016   arsenate resistance protein 2 isoform e 
SRRT                  0.016   arsenate resistance protein 2 isoform d 
SRRT                  0.016   arsenate resistance protein 2 isoform c 
SRRT                  0.016   arsenate resistance protein 2 isoform a 
NASP                  0.016   nuclear autoantigenic sperm protein isoform 2 
NASP                  0.016   nuclear autoantigenic sperm protein isoform 1 
USP34                 0.016   ubiquitin specific protease 34 
PPIG                  0.016   peptidylprolyl isomerase G 
CASC3                 0.016   metastatic lymph node 51 
KCNMA1                0.014   large conductance calcium-activated potassium chann...
KCNMA1                0.014   large conductance calcium-activated potassium chann...
KCNMA1                0.014   large conductance calcium-activated potassium channe...
KCNMA1                0.014   large conductance calcium-activated potassium channe...
HRNR                  0.014   hornerin 
TDRD1                 0.014   tudor domain containing 1 
ZCCHC2                0.014   zinc finger, CCHC domain containing 2 
FRMPD3                0.014   PREDICTED: FERM and PDZ domain containing 3 
ZNF655                0.014   zinc finger protein 655 isoform f 
ZNF655                0.014   zinc finger protein 655 isoform f 
ZNF655                0.014   zinc finger protein 655 isoform a 
ZNF655                0.014   zinc finger protein 655 isoform a 
DMP1                  0.012   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press