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Search of human proteins with 7662018
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|7662018 PHD finger protein 3 [Homo sapiens]
(2039 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|7662018 PHD finger protein 3 [Homo sapiens] 4109 0.0
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 235 4e-61
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens] 199 2e-50
gi|47271475 SPOC domain containing 1 [Homo sapiens] 193 2e-48
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 84 1e-15
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 81 9e-15
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 74 1e-12
gi|239749424 PREDICTED: hypothetical protein XP_002347041 [Homo ... 74 2e-12
gi|5803191 transcription elongation factor A 1 isoform 1 [Homo s... 74 2e-12
gi|45439355 transcription elongation factor A 1 isoform 2 [Homo ... 74 2e-12
gi|169167715 PREDICTED: hypothetical protein [Homo sapiens] 73 3e-12
gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens] 72 7e-12
gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens] 72 7e-12
gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens] 70 2e-11
gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens] 70 2e-11
gi|41350335 transcription elongation factor A (SII), 3 [Homo sap... 69 4e-11
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 69 5e-11
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 69 6e-11
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 69 6e-11
gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens] 67 1e-10
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 67 2e-10
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 66 4e-10
gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens] 65 5e-10
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 64 2e-09
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 63 3e-09
gi|52426743 cisplatin resistance-associated overexpressed protei... 63 3e-09
gi|19923485 cisplatin resistance-associated overexpressed protei... 63 3e-09
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 62 4e-09
gi|38505156 transcription elongation factor A protein 2 isoform ... 62 6e-09
gi|4507385 transcription elongation factor A protein 2 isoform a... 62 6e-09
>gi|7662018 PHD finger protein 3 [Homo sapiens]
Length = 2039
Score = 4109 bits (10656), Expect = 0.0
Identities = 2039/2039 (100%), Positives = 2039/2039 (100%)
Query: 1 MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSASQNVLEDSLKNMLSDKDPMLGSAS 60
MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSASQNVLEDSLKNMLSDKDPMLGSAS
Sbjct: 1 MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSASQNVLEDSLKNMLSDKDPMLGSAS 60
Query: 61 NQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTIDEEELILPNRNLRDKVEE 120
NQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTIDEEELILPNRNLRDKVEE
Sbjct: 61 NQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTIDEEELILPNRNLRDKVEE 120
Query: 121 NSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAAPLSNTKKASGKTVSTAKAGVKQPERSQ 180
NSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAAPLSNTKKASGKTVSTAKAGVKQPERSQ
Sbjct: 121 NSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAAPLSNTKKASGKTVSTAKAGVKQPERSQ 180
Query: 181 VKEEVCMSLKPEYHKENRRCSRNSGQIEVVPEVSVSSSHSSVSSCLEMKDEDGLDSKHKC 240
VKEEVCMSLKPEYHKENRRCSRNSGQIEVVPEVSVSSSHSSVSSCLEMKDEDGLDSKHKC
Sbjct: 181 VKEEVCMSLKPEYHKENRRCSRNSGQIEVVPEVSVSSSHSSVSSCLEMKDEDGLDSKHKC 240
Query: 241 NNPGEIDVPSHELNCSLLSETCVTIGEKKNEALMECKAKPVGSPLFKFSDKEEHEQNDSI 300
NNPGEIDVPSHELNCSLLSETCVTIGEKKNEALMECKAKPVGSPLFKFSDKEEHEQNDSI
Sbjct: 241 NNPGEIDVPSHELNCSLLSETCVTIGEKKNEALMECKAKPVGSPLFKFSDKEEHEQNDSI 300
Query: 301 SGKTGETVVEEMIATRKVEQDSKETVKLSHEDDHILEDAGSSDISSDAACTNPNKTENSL 360
SGKTGETVVEEMIATRKVEQDSKETVKLSHEDDHILEDAGSSDISSDAACTNPNKTENSL
Sbjct: 301 SGKTGETVVEEMIATRKVEQDSKETVKLSHEDDHILEDAGSSDISSDAACTNPNKTENSL 360
Query: 361 VGLPSCVDEVTECNLELKDTMGIADKTENTLERNKIEPLGYCEDAESNRQLESTEFNKSN 420
VGLPSCVDEVTECNLELKDTMGIADKTENTLERNKIEPLGYCEDAESNRQLESTEFNKSN
Sbjct: 361 VGLPSCVDEVTECNLELKDTMGIADKTENTLERNKIEPLGYCEDAESNRQLESTEFNKSN 420
Query: 421 LEVVDTSTFGPESNILENAICDVPDQNSKQLNAIESTKIESHETANLQDDRNSQSSSVSY 480
LEVVDTSTFGPESNILENAICDVPDQNSKQLNAIESTKIESHETANLQDDRNSQSSSVSY
Sbjct: 421 LEVVDTSTFGPESNILENAICDVPDQNSKQLNAIESTKIESHETANLQDDRNSQSSSVSY 480
Query: 481 LESKSVKSKHTKPVIHSKQNMTTDAPKKIVAAKYEVIHSKTKVNVKSVKRNTDVPESQQN 540
LESKSVKSKHTKPVIHSKQNMTTDAPKKIVAAKYEVIHSKTKVNVKSVKRNTDVPESQQN
Sbjct: 481 LESKSVKSKHTKPVIHSKQNMTTDAPKKIVAAKYEVIHSKTKVNVKSVKRNTDVPESQQN 540
Query: 541 FHRPVKVRKKQIDKEPKIQSCNSGVKSVKNQAHSVLKKTLQDQTLVQIFKPLTHSLSDKS 600
FHRPVKVRKKQIDKEPKIQSCNSGVKSVKNQAHSVLKKTLQDQTLVQIFKPLTHSLSDKS
Sbjct: 541 FHRPVKVRKKQIDKEPKIQSCNSGVKSVKNQAHSVLKKTLQDQTLVQIFKPLTHSLSDKS 600
Query: 601 HAHPGCLKEPHHPAQTGHVSHSSQKQCHKPQQQAPAMKTNSHVKEELEHPGVEHFKEEDK 660
HAHPGCLKEPHHPAQTGHVSHSSQKQCHKPQQQAPAMKTNSHVKEELEHPGVEHFKEEDK
Sbjct: 601 HAHPGCLKEPHHPAQTGHVSHSSQKQCHKPQQQAPAMKTNSHVKEELEHPGVEHFKEEDK 660
Query: 661 LKLKKPEKNLQPRQRRSSKSFSLDEPPLFIPDNIATIRREGSDHSSSFESKYMWTPSKQC 720
LKLKKPEKNLQPRQRRSSKSFSLDEPPLFIPDNIATIRREGSDHSSSFESKYMWTPSKQC
Sbjct: 661 LKLKKPEKNLQPRQRRSSKSFSLDEPPLFIPDNIATIRREGSDHSSSFESKYMWTPSKQC 720
Query: 721 GFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKKTEIL 780
GFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKKTEIL
Sbjct: 721 GFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKKTEIL 780
Query: 781 DPDTLENQATVEFHSGDKTMECEKLGLSKHTTNDRTKYIDDTVKHKVKILKRESGEGRNS 840
DPDTLENQATVEFHSGDKTMECEKLGLSKHTTNDRTKYIDDTVKHKVKILKRESGEGRNS
Sbjct: 781 DPDTLENQATVEFHSGDKTMECEKLGLSKHTTNDRTKYIDDTVKHKVKILKRESGEGRNS 840
Query: 841 SDCRDNEIKKWQLAPLRKMGQPVLPRRSSEEKSEKIPKESTTVTCTGEKASKPGTHEKQE 900
SDCRDNEIKKWQLAPLRKMGQPVLPRRSSEEKSEKIPKESTTVTCTGEKASKPGTHEKQE
Sbjct: 841 SDCRDNEIKKWQLAPLRKMGQPVLPRRSSEEKSEKIPKESTTVTCTGEKASKPGTHEKQE 900
Query: 901 MKKKKVEKGVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAKVAT 960
MKKKKVEKGVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAKVAT
Sbjct: 901 MKKKKVEKGVLNVHPAASASKPSADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAKVAT 960
Query: 961 KIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1020
KIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS
Sbjct: 961 KIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELAS 1020
Query: 1021 KELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAAMEIQEPA 1080
KELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAAMEIQEPA
Sbjct: 1021 KELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAAMEIQEPA 1080
Query: 1081 ANKSLEKPEGSEKQKEEVDSMSKDTTSQHRQHLFDLNCKICIGRMAPPVDDLSPKKVKVV 1140
ANKSLEKPEGSEKQKEEVDSMSKDTTSQHRQHLFDLNCKICIGRMAPPVDDLSPKKVKVV
Sbjct: 1081 ANKSLEKPEGSEKQKEEVDSMSKDTTSQHRQHLFDLNCKICIGRMAPPVDDLSPKKVKVV 1140
Query: 1141 VGVARKHSDNEAESIADALSSTSNILASEFFEEEKQESPKSTFSPAPRPEMPGTVEVEST 1200
VGVARKHSDNEAESIADALSSTSNILASEFFEEEKQESPKSTFSPAPRPEMPGTVEVEST
Sbjct: 1141 VGVARKHSDNEAESIADALSSTSNILASEFFEEEKQESPKSTFSPAPRPEMPGTVEVEST 1200
Query: 1201 FLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEK 1260
FLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEK
Sbjct: 1201 FLARLNFIWKGFINMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEK 1260
Query: 1261 IKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGATD 1320
IKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGATD
Sbjct: 1261 IKASGTKEICVVRFTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGATD 1320
Query: 1321 KIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRQHSACASTSHIAETPESAPPIALPPDK 1380
KIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRQHSACASTSHIAETPESAPPIALPPDK
Sbjct: 1321 KIPHPLVPFDGPGLELHRPNLLLGLIIRQKLKRQHSACASTSHIAETPESAPPIALPPDK 1380
Query: 1381 KSKIEVSTEEAPEEENDFFNSFTTVLHKQRNKPQQNLQEDLPTAVEPLMEVTKQEPPKPL 1440
KSKIEVSTEEAPEEENDFFNSFTTVLHKQRNKPQQNLQEDLPTAVEPLMEVTKQEPPKPL
Sbjct: 1381 KSKIEVSTEEAPEEENDFFNSFTTVLHKQRNKPQQNLQEDLPTAVEPLMEVTKQEPPKPL 1440
Query: 1441 RFLPGVLIGWENQPTTLELANKPLPVDDILQSLLGTTGQVYDQAQSVMEQNTVKEIPFLN 1500
RFLPGVLIGWENQPTTLELANKPLPVDDILQSLLGTTGQVYDQAQSVMEQNTVKEIPFLN
Sbjct: 1441 RFLPGVLIGWENQPTTLELANKPLPVDDILQSLLGTTGQVYDQAQSVMEQNTVKEIPFLN 1500
Query: 1501 EQTNSKIEKTDNVEVTDGENKEIKVKVDNISESTDKSAEIETSVVGSSSISAGSLTSLSL 1560
EQTNSKIEKTDNVEVTDGENKEIKVKVDNISESTDKSAEIETSVVGSSSISAGSLTSLSL
Sbjct: 1501 EQTNSKIEKTDNVEVTDGENKEIKVKVDNISESTDKSAEIETSVVGSSSISAGSLTSLSL 1560
Query: 1561 RGKPPDVSTEAFLTNLSIQSKQEETVESKEKTLKRQLQEDQENNLQDNQTSNSSPCRSNV 1620
RGKPPDVSTEAFLTNLSIQSKQEETVESKEKTLKRQLQEDQENNLQDNQTSNSSPCRSNV
Sbjct: 1561 RGKPPDVSTEAFLTNLSIQSKQEETVESKEKTLKRQLQEDQENNLQDNQTSNSSPCRSNV 1620
Query: 1621 GKGNIDGNVSCSENLVANTARSPQFINLKRDPRQAAGRSQPVTTSESKDGDSCRNGEKHM 1680
GKGNIDGNVSCSENLVANTARSPQFINLKRDPRQAAGRSQPVTTSESKDGDSCRNGEKHM
Sbjct: 1621 GKGNIDGNVSCSENLVANTARSPQFINLKRDPRQAAGRSQPVTTSESKDGDSCRNGEKHM 1680
Query: 1681 LPGLSHNKEHLTEQINVEEKLCSAEKNSCVQQSDNLKVAQNSPSVENIQTSQAEQAKPLQ 1740
LPGLSHNKEHLTEQINVEEKLCSAEKNSCVQQSDNLKVAQNSPSVENIQTSQAEQAKPLQ
Sbjct: 1681 LPGLSHNKEHLTEQINVEEKLCSAEKNSCVQQSDNLKVAQNSPSVENIQTSQAEQAKPLQ 1740
Query: 1741 EDILMQNIETVHPFRRGSAVATSHFEVGNTCPSEFPSKSITFTSRSTSPRTSTNFSPMRP 1800
EDILMQNIETVHPFRRGSAVATSHFEVGNTCPSEFPSKSITFTSRSTSPRTSTNFSPMRP
Sbjct: 1741 EDILMQNIETVHPFRRGSAVATSHFEVGNTCPSEFPSKSITFTSRSTSPRTSTNFSPMRP 1800
Query: 1801 QQPNLQHLKSSPPGFPFPGPPNFPPQSMFGFPPHLPPPLLPPPGFGFAQNPMVPWPPVVH 1860
QQPNLQHLKSSPPGFPFPGPPNFPPQSMFGFPPHLPPPLLPPPGFGFAQNPMVPWPPVVH
Sbjct: 1801 QQPNLQHLKSSPPGFPFPGPPNFPPQSMFGFPPHLPPPLLPPPGFGFAQNPMVPWPPVVH 1860
Query: 1861 LPGQPQRMMGPLSQASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDR 1920
LPGQPQRMMGPLSQASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDR
Sbjct: 1861 LPGQPQRMMGPLSQASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDR 1920
Query: 1921 QRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRG 1980
QRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRG
Sbjct: 1921 QRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRG 1980
Query: 1981 TDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
TDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR
Sbjct: 1981 TDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 235 bits (599), Expect = 4e-61
Identities = 255/952 (26%), Positives = 388/952 (40%), Gaps = 179/952 (18%)
Query: 1128 PVDDLSP------KKVKVVVGVARKHSDNEAESIADALSSTSNILASEFFEEEKQESPKS 1181
P++DLSP V V V+ + S A++S ++ S E +Q+ PK
Sbjct: 942 PLEDLSPCPASCGSGVVTTVTVSGRDPRTAPSSSCTAVASAASRPDSTHMVEARQDVPKP 1001
Query: 1182 TF---------------SPAPR----PEMPGTVEVEST---------FLARLNFIWKGFI 1213
SP PR P P ES FL+RL+ IWKGFI
Sbjct: 1002 VLTSVMVPKSILAKPSSSPDPRYLSVPPSPNISTSESRSPPEGDTTLFLSRLSTIWKGFI 1061
Query: 1214 NMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEKIKASGTKEICVVR 1273
NM SVAKFVTKAYPVSG +YL+EDLPD+I +GGRI+P+TVWDYV K+K+S +KE+C++R
Sbjct: 1062 NMQSVAKFVTKAYPVSGCFDYLSEDLPDTIHIGGRIAPKTVWDYVGKLKSSVSKELCLIR 1121
Query: 1274 FTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGATDKIPHPLVPFDGPG 1333
F P TEE++++Y L++YFSSR R+GV ANN + VKD+YLIPL A D +P L+PF+GPG
Sbjct: 1122 FHPATEEEEVAYISLYSYFSSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPG 1181
Query: 1334 LELHRPNLLLGLIIRQKLKR---------------------------------------- 1353
LE RPN++LGL+I QK+KR
Sbjct: 1182 LESPRPNIILGLVICQKIKRPANSGELDKMDEKRTRLQPEEADVPAYPKVATVPQSEKKP 1241
Query: 1354 -QHSACASTSHIAETPESAPPIALPPDKKSKIEVSTEEAPEEENDFFNSFTTVLHKQRNK 1412
++ C++ + ++ TP +PP P + ++V + P + + T
Sbjct: 1242 SKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLKVLSSLKPAAPSPATAATTAAAASTAAS 1301
Query: 1413 PQQNLQEDLPTAVEPLMEV---TKQEPPKPLRFLPGVLIGWENQPTTLELANKPLPVDDI 1469
+ + +E +++ K+ R PG G +P T A +P +
Sbjct: 1302 STASSASKTASPLEHILQTLFGKKKSFDPSAREPPGSTAGLPQEPKT--TAEDGVPAPPL 1359
Query: 1470 LQSLLGTTGQVYDQAQSVMEQNTVKEIPFLNEQTNSKIEKTDNVEVTDGENKEIKVKVDN 1529
L ++ GQ + + +++ E+ + P+ E+ D V G E++ +
Sbjct: 1360 LDPIVQQFGQ-FSKDKALEEEE--DDRPYDPEEEYDPERAFDTQLVERGRRHEVERAPEA 1416
Query: 1530 ISESTDKSA---EIETSVVGSSSISAGSLTSLSLRG-------KPPDVSTEAFLTNLSIQ 1579
+ ++ A E ET ++ + ++ L + +P + A +L Q
Sbjct: 1417 AAAEREEVAYDPEDET-ILEEAKVTVDDLPNRMCADVRRNSVERPAEPVAGAATPSLVEQ 1475
Query: 1580 SKQEETVESKEKTLKRQLQEDQENNLQD-------------NQTSNSSPCRSNVGKGNID 1626
K E + + + KRQL+E +E Q + S P +S++ K +
Sbjct: 1476 QKMLEELNKQIEEQKRQLEEQEEALRQQRAAVGVSMAHFSVSDALMSPPPKSSLPKAELF 1535
Query: 1627 GNVSCSENLVANTARSPQFINLKRDPRQAAGRSQPVTTSESKDGDSCR---NGEKHMLPG 1683
S + A+ + Q N RDPRQA R T E + R G + LP
Sbjct: 1536 QQEQQSADKPASLPPASQASN-HRDPRQA--RRLAAETGEGEGEPLSRLSARGAQGALPE 1592
Query: 1684 LSHNKEHLTEQINV---EEK------LCSAEKNSCVQQSDNLKVAQNSPS-VENIQTSQA 1733
++ L Q + EEK S EK + D K + + S A
Sbjct: 1593 RDASRGGLVGQAPMPVPEEKEPASSPWASGEKPPAGSEQDGWKAEPGEGTRPATVGDSSA 1652
Query: 1734 EQAK----------PLQEDILMQNIETVHPF------RRGSAVATSHFEVGNTCPSEFPS 1777
A+ LQ +Q+ PF + A+ ++ +E S S
Sbjct: 1653 RPARRVLLPTPPCGALQPGFPLQHDGERDPFTCPGFASQDKALGSAQYEDPRNLHSAGRS 1712
Query: 1778 KS---ITFTSRSTSPRTSTNFSPMRP-------QQPNLQHLKSSPP---------GFPFP 1818
S T R R +P+ P QP Q + P G FP
Sbjct: 1713 SSPAGETEGDREPQARPGEGTAPLPPPGQKVGGSQPPFQGQREPGPHALGMSGLHGPNFP 1772
Query: 1819 GP----PNFPPQSMFGFPPHLPPPLLPPPGFGFAQNPMVPWPPVVHLPGQPQRMMGPLSQ 1874
GP P FP +++ P PP FG + P+ H P GP
Sbjct: 1773 GPRGPAPPFPEENIASNDGPRGP---PPARFGAQKGPIPSLFSGQHGPPPYGDSRGPSPS 1829
Query: 1875 ---ASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRF 1923
R + P F + K DP G + + Q D P+N G +F
Sbjct: 1830 YLGGPRGVAPSQFEERK----------DPHGEKREFQ-DAPYNEVTGAPAQF 1870
Score = 177 bits (449), Expect = 9e-44
Identities = 109/283 (38%), Positives = 156/283 (55%), Gaps = 21/283 (7%)
Query: 916 AASASKPSADQIRQSVRHSLKDILMKRLTDSN-LKVPEEKAAKVATKIEKELFSFFRDTD 974
+A+ S+P++ QIRQ++R SLK+IL KR+ DS+ L + E + K+A IEKE+F+ F+ TD
Sbjct: 660 SAAPSQPNS-QIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVTD 718
Query: 975 AKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHT 1034
+YK+KYRS+MFNLKDPKN LF +VL+ E++ L+R+ PEEL SKEL+ W+ R R
Sbjct: 719 NRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSV 778
Query: 1035 IEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAAMEIQEPAANKSLEKPEGSEKQ 1094
+E K E ++ T + ++E P+ + E E KS +
Sbjct: 779 MESRTKLHNESKK---TAPRQEAIPDLEDSPPVSDSEEQQESARAVPEKS------TAPL 829
Query: 1095 KEEVDSMSKDTTSQHRQHLFDLNCKICIGRMAPPVDDLSPKKVKVVVGVAR-----KHSD 1149
+ SM KDTTSQHR HLFDLNCKIC G++ D+ +PKK K+ V + KH
Sbjct: 830 LDVFSSMLKDTTSQHRAHLFDLNCKICTGQVPSAEDEPAPKKQKLSASVKKEDLKSKHDS 889
Query: 1150 NEAESIADALSSTSNILASEFFEEEKQESPK-----STFSPAP 1187
+ + D+ E E ES T+ P P
Sbjct: 890 SAPDPAPDSADEVMPEAVPEVASEPGLESASHPNVDRTYFPGP 932
Score = 77.8 bits (190), Expect = 1e-13
Identities = 75/278 (26%), Positives = 116/278 (41%), Gaps = 34/278 (12%)
Query: 1772 PSEFPSKSITFTSRSTSPRTST--NFSPMRPQQPNLQHLKSSPPGFPFPGPPNFPPQSMF 1829
P +F + + R T+ R F +R P + + +P F F G PQ M
Sbjct: 1964 PQQFEDQRVHSPPRFTNQRAPAPLQFGGLRGSAPFSEKNEQTPSRFHFQGQA---PQVMK 2020
Query: 1830 GFP-PHLPPPLLPPPGFGFAQNPMVPW----PPVV---HLPGQPQRMMGPLSQASRYIGP 1881
P P L P PP Q+ W PP PGQ G + A G
Sbjct: 2021 PGPRPLLELPSHPP------QHRKDRWEEAGPPSALSSSAPGQGPEADGQWASADFREGK 2074
Query: 1882 QNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQ 1941
+ Y+ + +R D ++ + R DR+R + RER +W++
Sbjct: 2075 GHEYRNQTFEGRQRERFDVGPKEKPLEEPDAQGRASEDRRRERERGRNWSRER---DWDR 2131
Query: 1942 ESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD-SRNVDKKPDKPK 2000
E R RD+ +D DR ++D+ER DRG + SR+ SRN +++ D+ +
Sbjct: 2132 PREWDRHRDKDSSRDWDRNRERSANRDRER----EADRGKEWDRSRERSRNRERERDRRR 2187
Query: 2001 SEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
D + +ER++ K R+ E+ RDR DR+KSK
Sbjct: 2188 DRDRSRSRERDRDKARDRERGRDR-------KDRSKSK 2218
Score = 72.4 bits (176), Expect = 4e-12
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 49/291 (16%)
Query: 714 WTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCC--- 770
+ P+ C++PH NRFM+ C RC++WFHGDCVG+S ++ + + ++Y+C C
Sbjct: 264 YDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQ 323
Query: 771 AEEDKKTEILDPDTLENQATVEFHSGDKT-MECEKLG-LSKHTTNDR------TKYIDDT 822
+++ +E D Q ++ GD +C +G + + ++ D+ K + +
Sbjct: 324 VQDETHSETAD------QQEAKWRPGDADGTDCTSIGTIEQKSSEDQGIKGRIEKAANPS 377
Query: 823 VKHKVKILK---------RESGEG------RNSSDCRDNEIKKWQLAPLRKMGQPVLPRR 867
K K+KI + + G G +S C ++ I K A ++ + +
Sbjct: 378 GKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAAATMKFLSSGKEQKP 437
Query: 868 SSEEKSEKIPKESTTVTC---TGEKASKPGTHEKQEMKKKKVEKGV--------LNVHPA 916
+EK + P++ + C G K S E K+ V+K V L A
Sbjct: 438 KPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAVVVPARSEALGKEAA 497
Query: 917 ASASKPS------ADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAKVATK 961
+S PS + ++ + L+ + T + + E+ AA A+K
Sbjct: 498 CESSTPSWASDHNYNAVKPEKTAAPSPSLLYKSTKEDRRSEEKAAAMAASK 548
Score = 61.6 bits (148), Expect = 7e-09
Identities = 65/243 (26%), Positives = 92/243 (37%), Gaps = 31/243 (12%)
Query: 1790 RTSTNFSPMRPQQPNLQHLKSSPPGFPFPGP------PNFPPQSMFG-FPPHLPPPLLPP 1842
R S FS Q P+ H + P PGP P+ PPQ + PP L
Sbjct: 1993 RGSAPFSEKNEQTPSRFHFQGQAPQVMKPGPRPLLELPSHPPQHRKDRWEEAGPPSALSS 2052
Query: 1843 PGFGFAQNPMVPWPPVVHLPGQPQRMMGPL---SQASRY-IGPQNFY--------QVKDI 1890
G W G+ Q R+ +GP+ + +
Sbjct: 2053 SAPGQGPEADGQWASADFREGKGHEYRNQTFEGRQRERFDVGPKEKPLEEPDAQGRASED 2112
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKG-------DRQRFYSDSHHLKRERHE-KEWEQE 1942
RR ER W R+ R ++R + DR R S + +RE KEW++
Sbjct: 2113 RRRERERGRNWSRERDWDRPREWDRHRDKDSSRDWDRNRERSANRDREREADRGKEWDRS 2172
Query: 1943 SERHRRRDRSQD--KDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPK 2000
ER R R+R +D +DRDR E +DK R R DR K+ +R D KP+ +
Sbjct: 2173 RERSRNRERERDRRRDRDRSRSRERDRDKARDRERGRDRKDRSKSKESAR--DPKPEASR 2230
Query: 2001 SED 2003
+ D
Sbjct: 2231 ASD 2233
Score = 60.1 bits (144), Expect = 2e-08
Identities = 72/318 (22%), Positives = 116/318 (36%), Gaps = 66/318 (20%)
Query: 1768 GNTCPSEFPSKSITFTSRSTSPRTS--TNFSPMRPQQPN-LQHLKSSPPGFPFPGPPNFP 1824
G PS+F + PR + F R PN + + P F PGP
Sbjct: 1905 GGPPPSQFGGQRGPPPGHFVGPRGPHPSQFETARGPHPNQFEGPRGQAPNF-MPGPRGIQ 1963
Query: 1825 PQSMFGFPPHLPPPLL-----PPPGFGFAQNPMVPW-------PPVVHLPGQPQRMMGPL 1872
PQ H PP P FG + P+ P H GQ ++M P
Sbjct: 1964 PQQFEDQRVHSPPRFTNQRAPAPLQFGGLRGS-APFSEKNEQTPSRFHFQGQAPQVMKP- 2021
Query: 1873 SQASRYIGPQNFYQVKDIRRPERRHSDPWGRQ-----------------DQQQLDRPFNR 1915
GP+ ++ P + D W D Q F
Sbjct: 2022 -------GPRPLLELPS--HPPQHRKDRWEEAGPPSALSSSAPGQGPEADGQWASADFRE 2072
Query: 1916 GKG-----------DRQRFYSDSHHLKRERHEKEWEQESERHRRRDR----SQDKDRDRK 1960
GKG R+RF E + + +R R R+R S+++D DR
Sbjct: 2073 GKGHEYRNQTFEGRQRERFDVGPKEKPLEEPDAQGRASEDRRRERERGRNWSRERDWDRP 2132
Query: 1961 SREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEK 2020
+ H+DK+ +R DR + A+RD ++ + + +++++ +ER +++ RE ++
Sbjct: 2133 REWDRHRDKDSSR--DWDRNRERSANRD-----REREADRGKEWDRSRERSRNRERERDR 2185
Query: 2021 DRDRYHKDRDHTDRTKSK 2038
RDR DR K++
Sbjct: 2186 RRDRDRSRSRERDRDKAR 2203
>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
Length = 1189
Score = 199 bits (507), Expect = 2e-50
Identities = 111/240 (46%), Positives = 147/240 (61%), Gaps = 34/240 (14%)
Query: 1128 PVDDLSP------KKVKVVVGVARKHSDNEAESIADALSSTSNILASEFFEEEKQESPKS 1181
P++DLSP V V V+ + S A++S ++ S E +Q+ PK
Sbjct: 942 PLEDLSPCPASCGSGVVTTVTVSGRDPRTAPSSSCTAVASAASRPDSTHMVEARQDVPKP 1001
Query: 1182 TF---------------SPAPR----PEMPGTVEVEST---------FLARLNFIWKGFI 1213
SP PR P P ES FL+RL+ IWKGFI
Sbjct: 1002 VLTSVMVPKSILAKPSSSPDPRYLSVPPSPNISTSESRSPPEGDTTLFLSRLSTIWKGFI 1061
Query: 1214 NMPSVAKFVTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEKIKASGTKEICVVR 1273
NM SVAKFVTKAYPVSG +YL+EDLPD+I +GGRI+P+TVWDYV K+K+S +KE+C++R
Sbjct: 1062 NMQSVAKFVTKAYPVSGCFDYLSEDLPDTIHIGGRIAPKTVWDYVGKLKSSVSKELCLIR 1121
Query: 1274 FTPVTEEDQISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGATDKIPHPLVPFDGPG 1333
F P TEE++++Y L++YFSSR R+GV ANN + VKD+YLIPL A D +P L+PF+GPG
Sbjct: 1122 FHPATEEEEVAYISLYSYFSSRGRFGVVANNNRHVKDLYLIPLSAQDPVPSKLLPFEGPG 1181
Score = 177 bits (449), Expect = 9e-44
Identities = 109/283 (38%), Positives = 156/283 (55%), Gaps = 21/283 (7%)
Query: 916 AASASKPSADQIRQSVRHSLKDILMKRLTDSN-LKVPEEKAAKVATKIEKELFSFFRDTD 974
+A+ S+P++ QIRQ++R SLK+IL KR+ DS+ L + E + K+A IEKE+F+ F+ TD
Sbjct: 660 SAAPSQPNS-QIRQNIRRSLKEILWKRVNDSDDLIMTENEVGKIALHIEKEMFNLFQVTD 718
Query: 975 AKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHT 1034
+YK+KYRS+MFNLKDPKN LF +VL+ E++ L+R+ PEEL SKEL+ W+ R R
Sbjct: 719 NRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSV 778
Query: 1035 IEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAAMEIQEPAANKSLEKPEGSEKQ 1094
+E K E ++ T + ++E P+ + E E KS +
Sbjct: 779 MESRTKLHNESKK---TAPRQEAIPDLEDSPPVSDSEEQQESARAVPEKS------TAPL 829
Query: 1095 KEEVDSMSKDTTSQHRQHLFDLNCKICIGRMAPPVDDLSPKKVKVVVGVAR-----KHSD 1149
+ SM KDTTSQHR HLFDLNCKIC G++ D+ +PKK K+ V + KH
Sbjct: 830 LDVFSSMLKDTTSQHRAHLFDLNCKICTGQVPSAEDEPAPKKQKLSASVKKEDLKSKHDS 889
Query: 1150 NEAESIADALSSTSNILASEFFEEEKQESPK-----STFSPAP 1187
+ + D+ E E ES T+ P P
Sbjct: 890 SAPDPAPDSADEVMPEAVPEVASEPGLESASHPNVDRTYFPGP 932
Score = 72.4 bits (176), Expect = 4e-12
Identities = 67/291 (23%), Positives = 125/291 (42%), Gaps = 49/291 (16%)
Query: 714 WTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCC--- 770
+ P+ C++PH NRFM+ C RC++WFHGDCVG+S ++ + + ++Y+C C
Sbjct: 264 YDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQ 323
Query: 771 AEEDKKTEILDPDTLENQATVEFHSGDKT-MECEKLG-LSKHTTNDR------TKYIDDT 822
+++ +E D Q ++ GD +C +G + + ++ D+ K + +
Sbjct: 324 VQDETHSETAD------QQEAKWRPGDADGTDCTSIGTIEQKSSEDQGIKGRIEKAANPS 377
Query: 823 VKHKVKILK---------RESGEG------RNSSDCRDNEIKKWQLAPLRKMGQPVLPRR 867
K K+KI + + G G +S C ++ I K A ++ + +
Sbjct: 378 GKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAAATMKFLSSGKEQKP 437
Query: 868 SSEEKSEKIPKESTTVTC---TGEKASKPGTHEKQEMKKKKVEKGV--------LNVHPA 916
+EK + P++ + C G K S E K+ V+K V L A
Sbjct: 438 KPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAVVVPARSEALGKEAA 497
Query: 917 ASASKPS------ADQIRQSVRHSLKDILMKRLTDSNLKVPEEKAAKVATK 961
+S PS + ++ + L+ + T + + E+ AA A+K
Sbjct: 498 CESSTPSWASDHNYNAVKPEKTAAPSPSLLYKSTKEDRRSEEKAAAMAASK 548
>gi|47271475 SPOC domain containing 1 [Homo sapiens]
Length = 1216
Score = 193 bits (490), Expect = 2e-48
Identities = 152/473 (32%), Positives = 225/473 (47%), Gaps = 74/473 (15%)
Query: 887 GEKASKPGTHEKQEMKKKKVEKGVLNVHPAASAS----KPSAD-QIRQSVRHSLKDILMK 941
G+ +S P + M+ E+ L P SA KPS +R +V S++++L
Sbjct: 566 GDPSSDPACSQSGPME---AEEDSLPEQPEDSAQLQQEKPSLYIGVRGTVVRSMQEVLWT 622
Query: 942 RLTD-SNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKV 1000
RL + + + EE +A IE L+ + T+ +YK KYRSL+FNL+DP+N LF KV
Sbjct: 623 RLRELPDPVLSEEVVEGIAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKV 682
Query: 1001 LKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIE 1060
+ G+VTP L+RMS +LA +ELA WR +E + + +IE++Q+E R P +K+THKGE+E
Sbjct: 683 VHGDVTPYDLVRMSSMQLAPQELARWRDQEEKRGLNIIEQQQKEPCRLPASKMTHKGEVE 742
Query: 1061 IESDAPMKEQEAAMEIQEPAANKSLEKPE-GSEKQKEEVDSMSKDTTSQHRQHLFDLNCK 1119
I+ D +Q +E L P+ + + + S+DTT QH H D NC
Sbjct: 743 IQRD---MDQTLTLE--------DLVGPQMFMDCSPQALPIASEDTTGQHDHHFLDPNCH 791
Query: 1120 ICIGRMAPPVDDLSPKKVKVVVGVARKHSDNEAESIADALSSTSNILASEFFEEEKQESP 1179
IC D P S+ S A S NI +
Sbjct: 792 IC--------KDWEP-------------SNELLGSFEAAKSCGDNIFQKALSQ------- 823
Query: 1180 KSTFSPAPRPEMPGTVEVESTF-------------LARLNFI-----WKGFINMPSVAKF 1221
+P P PEMP T E+ T A + W+G ++M S+ +F
Sbjct: 824 ----TPMPAPEMPKTRELSPTEPQDRVPPSGLHVPAAPTKALPCLPPWEGVLDMFSIKRF 879
Query: 1222 VTKAYPVSGSPEYLTEDLPDSIQVGGRISPQTVWDYVEKIKASGTKEICVVRFTPVTEED 1281
+A VSG L + LP I+ G I VWD + I + K++CVVR P D
Sbjct: 880 RARAQLVSGHSCRLVQALPTVIRSAGCIPSNIVWDLLASICPAKAKDVCVVRLCPHGARD 939
Query: 1282 QISYTLLFAYFSSRKRYGVAANNMKQVKDMYLIPLGATDKIPHPLVPFDGPGL 1334
+ LL++Y + R+R+G+A+ + M L+PL A +P L P GPGL
Sbjct: 940 TQNCRLLYSYLNDRQRHGLAS---VEHMGMVLLPLPAFQPLPTRLRPLGGPGL 989
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 84.3 bits (207), Expect = 1e-15
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 2/151 (1%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHR 1947
+D RR ERR R+D++ +R R + DR+R RER EKE E E ER R
Sbjct: 656 RDERREERRVDRVDDRRDERARERDRERER-DRERERERERERDRER-EKERELERERAR 713
Query: 1948 RRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKD 2007
R+R ++K+RDR+ + D+ER R DR + + R+ R +++ ++ + + E++
Sbjct: 714 EREREREKERDRERDRDRDHDRERERERERDREKEREREREERERERERERERERERERE 773
Query: 2008 KEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
+ER + + +E E+ RD KD+ DR + +
Sbjct: 774 RERARERDKERERQRDWEDKDKGRDDRREKR 804
Score = 68.6 bits (166), Expect = 6e-11
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 21/169 (12%)
Query: 1888 KDIRRPERRHSDP---WGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESE 1944
+D R ++R S P GR D+ + D + DR D +R+R E E++ E
Sbjct: 632 RDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDR---ERERDRE 688
Query: 1945 RHRRRDRSQDKDRDR-------KSRE-EGHKDKERARLSHGDRGTDGKASRDSRNVDKKP 1996
R R R+R +D++R++ ++RE E ++KER R DR D + R+ +K
Sbjct: 689 RERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREKE 748
Query: 1997 DKPKSEDYEKDKEREKSKHREGEKDRDR-------YHKDRDHTDRTKSK 2038
+ + E+ E+++ERE+ + RE E++R+R + RD D+ K +
Sbjct: 749 REREREERERERERERERERERERERERARERDKERERQRDWEDKDKGR 797
Score = 58.2 bits (139), Expect = 8e-08
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 5/153 (3%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRER-HEKEWEQESERHRRR 1949
R ER R+ +++L+R R + +R+R R+R H++E E+E ER R +
Sbjct: 689 RERERERERDREREKERELERERARER-EREREKERDRERDRDRDHDRERERERERDREK 747
Query: 1950 DRS---QDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEK 2006
+R ++++R+R+ E +++ER R +R + + RD + DK D + + E
Sbjct: 748 EREREREERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEI 807
Query: 2007 DKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
++R + K + RY + + R KR
Sbjct: 808 REDRNPRDGHDERKSKKRYRNEGSPSPRQSPKR 840
Score = 55.5 bits (132), Expect = 5e-07
Identities = 31/142 (21%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
R ER + R+ +++ DR +R + D R RE+ + +E ER R R+
Sbjct: 705 RELERERAREREREREKERDRERDRDR-DHDRERERERERDREKEREREREERERERERE 763
Query: 1951 RSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKER 2010
R ++++R+R+ +DKER R + G+ R + + + D+ + +++ K +
Sbjct: 764 RERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSK 823
Query: 2011 EKSKHREGEKDRDRYHKDRDHT 2032
++ ++ R + R+H+
Sbjct: 824 KRYRNEGSPSPRQSPKRRREHS 845
Score = 55.1 bits (131), Expect = 7e-07
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 14/154 (9%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
R ER R ++ DR +R + +R+R +RER E+E E+E ER R R+
Sbjct: 711 RAREREREREKERDRERDRDRDHDRER-ERERERDREKEREREREERERERERERERERE 769
Query: 1951 RSQDKDRDR-----KSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYE 2005
R ++++R R + R+ +DK++ R DR + R+ RN D+ KS+
Sbjct: 770 RERERERARERDKERERQRDWEDKDKGR---DDRREKREEIREDRNPRDGHDERKSKKRY 826
Query: 2006 KDK-----EREKSKHREGEKDRDRYHKDRDHTDR 2034
+++ + + RE D D Y+ D ++
Sbjct: 827 RNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEK 860
Score = 52.8 bits (125), Expect = 3e-06
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 26/131 (19%)
Query: 1933 ERHEKEWEQESE---RHRRRDRSQDKDRDRKS----REEGHKD-------KERARLSHGD 1978
ER ++ ++S RH RDR +++RD++ R +G D +E R+ D
Sbjct: 610 ERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVD 669
Query: 1979 RGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREK----------SKHREGEKDRDRYH-K 2027
D +A R ++ ++ + + E+D+EREK + RE EK+RDR +
Sbjct: 670 DRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDR 729
Query: 2028 DRDHTDRTKSK 2038
DRDH DR + +
Sbjct: 730 DRDH-DRERER 739
Score = 50.4 bits (119), Expect = 2e-05
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 12/137 (8%)
Query: 1903 RQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSR 1962
R DQ + P DRQ S S +++ S RDR Q++DR R
Sbjct: 1250 RIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDR 1309
Query: 1963 EEGHKDKERARLSHGDRGTDGKASRD-SRNVDKKPDKPKSEDYEKDKEREKSKHREGEKD 2021
E +ER R R D A +D RN D+ D+ + E+++ERE+ K R+ +++
Sbjct: 1310 E-----RERERRDTRQREWDRDADKDWPRNRDR--DRLR----ERERERERDKRRDLDRE 1358
Query: 2022 RDRYHKDRDHTDRTKSK 2038
R+R D DR + +
Sbjct: 1359 RERLISDSVERDRDRDR 1375
Score = 50.1 bits (118), Expect = 2e-05
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 1886 QVKDIRRPERR---HSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQE 1942
++++ R E R +D GR + + P +G R DSH H+ WE
Sbjct: 542 EIRNESRNESRSEIRNDRMGRSRGRVPELPEKGSRGSRGS-QIDSHSSNSNYHDS-WETR 599
Query: 1943 S---ERHR-----RRDRSQDKDRDRKSREEGHKD-KERAR-----LSHGDRGTDGKAS-- 1986
S ER R RD+++D +R+ E +D +ER + + H R + +
Sbjct: 600 SSYPERDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDER 659
Query: 1987 RDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
R+ R VD+ D+ E+D+ERE+ + RE E++R+R DR+ + +R
Sbjct: 660 REERRVDRVDDRRDERARERDRERERDRERERERERER---DREREKERELER 709
Score = 47.8 bits (112), Expect = 1e-04
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 1886 QVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESER 1945
++ ++R E S RQD + + + DRQ R+R ++ E +R
Sbjct: 1250 RIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHDR 1309
Query: 1946 HRRRDRSQDKDR--DRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSED 2003
R R+R + R DR + ++ ++++R RL +R + RD +D++ ++ S+
Sbjct: 1310 ERERERRDTRQREWDRDADKDWPRNRDRDRLRERERERERDKRRD---LDRERERLISDS 1366
Query: 2004 YEKDKEREKSK---------------HREGEKDRDRYHKDRD 2030
E+D++R++ + EGE +RD RD
Sbjct: 1367 VERDRDRDRDRTFESSQIESVKRCEAKLEGEHERDLESTSRD 1408
Score = 43.9 bits (102), Expect = 0.002
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 28/186 (15%)
Query: 1860 HLPGQPQRMMGPLSQASRYIGPQ-----NFYQVKDIRRPERRHSDPWGRQDQQQLDRPFN 1914
H P P+R P R + P + Y + P+R+ S P R ++
Sbjct: 345 HSPS-PRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRKQSPPRHRSPMRE------ 397
Query: 1915 RGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDR-----KSREEGHKDK 1969
+G+ D +R S SH + ER E + +RDR +D +R +S H+D
Sbjct: 398 KGRHDHERT-SQSHDRRHERRE-------DTRGKRDREKDSREEREYEQDQSSSRDHRDD 449
Query: 1970 ERARLSHGDR-GTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRY-HK 2027
R R D + R+ R+ D + DY +D +E R+ RD + ++
Sbjct: 450 REPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRD-TKESRDPRDSRSTRDAHDYR 508
Query: 2028 DRDHTD 2033
DR+ D
Sbjct: 509 DREGRD 514
Score = 42.0 bits (97), Expect = 0.006
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 22/160 (13%)
Query: 1881 PQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWE 1940
P YQ + + P RR + P+ L P + R R S R HE+ +
Sbjct: 355 PSPSYQ-RTLTPPLRRSASPY---PSHSLSSPQRKQSPPRHR--SPMREKGRHDHERTSQ 408
Query: 1941 QESERHRRRDRSQDK-DRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKP 1999
RH RR+ ++ K DR++ SREE +++++ +SRD R+ D++P
Sbjct: 409 SHDRRHERREDTRGKRDREKDSREEREYEQDQS------------SSRDHRD-DREPRDG 455
Query: 2000 KSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+ +D R++ + R+ RD + RD++ TK R
Sbjct: 456 RDRRDARD-TRDRRELRDSRDMRDS-REMRDYSRDTKESR 493
Score = 40.8 bits (94), Expect = 0.014
Identities = 38/161 (23%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 1873 SQASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKR 1932
S +SR P++ QV R D +D+ + DR +R+R D+ +
Sbjct: 1272 SHSSRRSSPESDRQVHS-RSGSFDSRDRLQERDRYEHDR-------ERERERRDTRQREW 1323
Query: 1933 ERH-EKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARL----SHGDRGTDGKASR 1987
+R +K+W + +R R R+R ++++RD++ D+ER RL DR D +
Sbjct: 1324 DRDADKDWPRNRDRDRLRERERERERDKRR----DLDRERERLISDSVERDRDRDRDRTF 1379
Query: 1988 DSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKD 2028
+S ++ + E +++ E + D++R KD
Sbjct: 1380 ESSQIESVKRCEAKLEGEHERDLESTSRDSLALDKERMDKD 1420
Score = 35.0 bits (79), Expect = 0.75
Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 21/177 (11%)
Query: 1882 QNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQ 1941
Q ++ KD R +RR R+D+ D R R R + + +E
Sbjct: 787 QRDWEDKDKGRDDRREKREEIREDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSP 846
Query: 1942 ESERHRRRDRSQDKDR---------DRKSREEGHKDKER-ARLSHGDRGTDGKASRDSRN 1991
+S+ + D +K R + +S H ++R R DR + K S SR
Sbjct: 847 DSDAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHLTEDRQGRWKEEDRKPERKES--SRR 904
Query: 1992 VDKKPDKPKSEDYEKDKER----EKSKHREGE-----KDRDRYHKDRDHTDRTKSKR 2039
+++ K K +K +E+ E S+ R + + DR DR H + K +
Sbjct: 905 YEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQSEDRETSDRAHDENKKKAK 961
Score = 35.0 bits (79), Expect = 0.75
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 20/115 (17%)
Query: 1945 RHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRG-------------TDGKASRDSRN 1991
R R + +S + +RKSR + K E +R + DR +D + S +
Sbjct: 1233 RDREKTKSLEITGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGS 1292
Query: 1992 VDKKPDKPKSEDYEKDKEREK----SKHREGEKDRDR---YHKDRDHTDRTKSKR 2039
D + + + YE D+ERE+ ++ RE ++D D+ ++DRD + +R
Sbjct: 1293 FDSRDRLQERDRYEHDRERERERRDTRQREWDRDADKDWPRNRDRDRLRERERER 1347
Score = 32.0 bits (71), Expect = 6.3
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 22/142 (15%)
Query: 1919 DRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHG- 1977
DRQ + + K ER E E + + + S DK R++ E + + + + H
Sbjct: 884 DRQGRWKEEDR-KPERKESSRRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQ 942
Query: 1978 --DRGTDGKASRDSRN---VDKKPDKPK---------------SEDYEKDKEREKSKHRE 2017
DR T +A +++ + KKP K K SED + ++ K +
Sbjct: 943 SEDRETSDRAHDENKKKAKIQKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKGQKKKS 1002
Query: 2018 GEKDRDRYHKDRDHTDRTKSKR 2039
EK R + D D +D +++
Sbjct: 1003 IEKKRKKSKGDSDISDEEAAQQ 1024
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 81.3 bits (199), Expect = 9e-15
Identities = 42/153 (27%), Positives = 82/153 (53%), Gaps = 7/153 (4%)
Query: 1886 QVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESER 1945
++ R ++ + G++++++ + R + +R+R + E+E E+E E+
Sbjct: 280 EISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEK 339
Query: 1946 HRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYE 2005
R R+R +D+DRDR + +D+ER DR D + S D RN D+ + KS D E
Sbjct: 340 ERERERERDRDRDRTKERDRDRDRER------DRDRDRERSSD-RNKDRSRSREKSRDRE 392
Query: 2006 KDKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
+++ERE+ + RE E++R+R + +R + +
Sbjct: 393 RERERERERERERERERERERERERERERERER 425
Score = 64.3 bits (155), Expect = 1e-09
Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHR 1947
++ R R + R+ +++ +R + K + D + + +++ ++E +R R
Sbjct: 310 RERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRDR 369
Query: 1948 RRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKD 2007
R+RS D+++DR E +D+ER R +R +++ ++ + + E++
Sbjct: 370 DRERSSDRNKDRSRSREKSRDRERERERERER-------------ERERERERERERERE 416
Query: 2008 KEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+ERE+ + RE +K RDR + D +R K +R
Sbjct: 417 REREREREREKDKKRDREEDEEDAYERRKLER 448
Score = 61.2 bits (147), Expect = 1e-08
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 30/169 (17%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRER-HEKEWEQESERHRRR 1949
R ER R ++ DR R + DR R S + R R EK ++E ER R R
Sbjct: 341 RERERERDRDRDRTKERDRDRDRERDR-DRDRERSSDRNKDRSRSREKSRDRERERERER 399
Query: 1950 DRSQDKDRDRKSREEGHKDKERARL----SHGDRGTDGKASRDSRNVDKK---------- 1995
+R ++++R+R+ E +++ER R DR D + + + R +++K
Sbjct: 400 EREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQE 459
Query: 1996 -------PDKPKSEDYEKDKEREKSKHREGEKDRDR-------YHKDRD 2030
++ K+ +YEK+ ERE+ + RE K+ R Y DRD
Sbjct: 460 RLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRD 508
Score = 39.3 bits (90), Expect = 0.040
Identities = 23/106 (21%), Positives = 56/106 (52%), Gaps = 4/106 (3%)
Query: 1919 DRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGD 1978
D ++Y S KR R ++ + ER R+R++ + ++ ++ EGH D + A L +
Sbjct: 508 DDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLAEGHPDPD-AELQRME 566
Query: 1979 RGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDR 2024
+ + R + ++P+ + E+ +++KE ++ + E E++ ++
Sbjct: 567 QEAE---RRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEEEPEQ 609
Score = 38.9 bits (89), Expect = 0.052
Identities = 23/54 (42%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 1807 HLKSSPPGFPFPGPPNFPPQSMFGFPPHLPP--PLLPPPGFGFAQNPMVPWPPV 1858
HL P G P PP PP GFPP +PP P++P P A P V P V
Sbjct: 6 HLNRPPMGIPAL-PPGIPPPQFPGFPPPVPPGTPMIPVPMSIMAPAPTVLVPTV 58
Score = 37.0 bits (84), Expect = 0.20
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 12/70 (17%)
Query: 1817 FPGPPNFPPQSMFGFPPHLPPPLLP------PPGFGFAQNPMVPWPPVVHLPGQPQRMMG 1870
FP N PP + PP +PPP P PPG PM+P P + P P ++
Sbjct: 3 FPPHLNRPPMGIPALPPGIPPPQFPGFPPPVPPG-----TPMIPVPMSIMAPA-PTVLVP 56
Query: 1871 PLSQASRYIG 1880
+S +++G
Sbjct: 57 TVSMVGKHLG 66
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 74.3 bits (181), Expect = 1e-12
Identities = 46/155 (29%), Positives = 85/155 (54%), Gaps = 14/155 (9%)
Query: 1892 RPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDR 1951
R R + R++++Q +R +R R+R H KR+RH E++ +R + R+R
Sbjct: 54 RERNRQKERERRREKRQTERETDR---KRERRREKDRHRKRDRHR---ERQRDREKERER 107
Query: 1952 SQDKDRDRKSREEGHKDKERARLS--HGDRG----TDGKASRD-SRNVDKKPDKPKSEDY 2004
D++RDR+ +E ++ KER R + G+RG TDG+ R+ R+ +K+ ++ +
Sbjct: 108 QTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRER 167
Query: 2005 EKDKEREKSKHREGEKDR-DRYHKDRDHTDRTKSK 2038
++ ER + K RE EK+R +R ++R K++
Sbjct: 168 QRQTERNRQKEREREKNRQERRERERQREKENKTE 202
Score = 73.9 bits (180), Expect = 1e-12
Identities = 45/154 (29%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKG-DRQRFYSDSHHLKRERHEKEWEQESERH 1946
+D R+ ER RQ + + DR R + R+R + KRER E+E E+E ER
Sbjct: 272 RDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRER-ERERERERERQ 330
Query: 1947 RRRDRSQDKDRDRKSREEGHKDKERARLS--HGDRGTDGKASRDSRNVDKKPDKPKSEDY 2004
R +R ++K+R+RK + + D+ER R + G R + + R+ + + + +
Sbjct: 331 RETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERER 390
Query: 2005 EKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
++D++R+K + R+ EKDRD + +R K +
Sbjct: 391 DRDRDRQKERERQTEKDRDGQRETEKQREREKDR 424
Score = 73.6 bits (179), Expect = 2e-12
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHR 1947
++ R ERR + ++ + DR RG+ +R+R +R+R + + E++ +R
Sbjct: 181 REKNRQERRERERQREKENKTEDRHSERGR-ERERERETETETERKR-QTDRERDRQRKT 238
Query: 1948 RRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKD 2007
R+R + +R+R S E +DKER R DR D + R D+K + D E +
Sbjct: 239 EREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETE 298
Query: 2008 KEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
++RE+ + RE E++R+R + +R + ++
Sbjct: 299 RKRERQRERERERERNRKRERERERERERERQ 330
Score = 71.2 bits (173), Expect = 9e-12
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRG-KGDRQRFYSDSHHLKRERHEKEWEQESERHRRR 1949
RR ER R+ Q++ +R R K +R+R +RE E++ E+E ER R+R
Sbjct: 289 RRTERDRETERKRERQRERERERERNRKRERERERERERERQRET-ERDREKERERKRKR 347
Query: 1950 DRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSE----DYE 2005
D++R+R++ EG + ER R +R R+ R D+ D+ K + +
Sbjct: 348 QTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKD 407
Query: 2006 KDKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
+D +RE K RE EKDR+ +R K K
Sbjct: 408 RDGQRETEKQREREKDRESERGRERGREREKQK 440
Score = 68.2 bits (165), Expect = 8e-11
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
R ER + ++Q DR +R + + + + E E ++E ER R RD
Sbjct: 210 RERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRD 269
Query: 1951 RSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD---SRNVDKKPDKPKSEDYEKD 2007
R D+DR +K RE D++R R + DR T+ K R R ++ + + + E++
Sbjct: 270 R--DRDRRQKERER-QTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERE 326
Query: 2008 KEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+ER++ R+ EK+R+R K + DR ++++
Sbjct: 327 RERQRETERDREKERERKRKRQTEMDRERNRQ 358
Score = 67.4 bits (163), Expect = 1e-10
Identities = 43/153 (28%), Positives = 87/153 (56%), Gaps = 16/153 (10%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHR 1947
+D + R +D R+ Q+Q +R NR K +R+R + ++ER E+E ++E E ++
Sbjct: 153 RDAEKERERQTD---RERQRQTER--NRQK-EREREKN-----RQERRERERQREKE-NK 200
Query: 1948 RRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKD 2007
DR ++ R+R+ E + ER R + +R K R+ +K+ ++ ++ + E +
Sbjct: 201 TEDRHSERGRERERERETETETERKRQTDRERDRQRKTERER---EKQAERERASERETE 257
Query: 2008 KEREKSKHREGEKDRDRYHKDRD-HTDRTKSKR 2039
+++E+ + R+ ++DRDR K+R+ TDR + +R
Sbjct: 258 RDKERERERDRDRDRDRRQKERERQTDRKRQRR 290
Score = 66.6 bits (161), Expect = 2e-10
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 1929 HLKRERHEKEWEQESERHRRRDRSQ-DKDRDRKSREEGHKDKERARLSHGDRGTDGKASR 1987
H + ++E ++ ER RRR++ Q +++ DRK KD+ R R H +R D + R
Sbjct: 46 HKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKER 105
Query: 1988 DSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTK 2036
+ R D++ D+ + ++ + KERE+ REGE+ RDR + +R +
Sbjct: 106 E-RQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQR 153
Score = 66.6 bits (161), Expect = 2e-10
Identities = 40/159 (25%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Query: 1892 RPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDR 1951
+ R D +D++Q +R + ++R D ++ ++E E+E ER+R+R+R
Sbjct: 260 KERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRER 319
Query: 1952 SQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD---SRNVDKKPDKPKSEDYEKDK 2008
++++R+R+ + E +D+E+ R R T+ R+ R ++ ++ + + E+D+
Sbjct: 320 ERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDR 379
Query: 2009 -------EREKSKHREGEKDRDRY-HKDRDHTDRTKSKR 2039
ERE+ + R+ +K+R+R KDRD T+ +R
Sbjct: 380 QSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQR 418
Score = 63.2 bits (152), Expect = 3e-09
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 4/124 (3%)
Query: 1919 DRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGD 1978
DR+R +RE+ + E E + +R RRR++ + + RDR + ++KER R + +
Sbjct: 53 DRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRE 112
Query: 1979 RGTDGKASRD---SRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRT 2035
R + R+ R + + + + D + D +RE+ + R+ EK+R+R DR+ +T
Sbjct: 113 RDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERER-QTDRERQRQT 171
Query: 2036 KSKR 2039
+ R
Sbjct: 172 ERNR 175
Score = 60.5 bits (145), Expect = 2e-08
Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRG-KGDRQRFYSDSHHLKRERHEKEWEQESERHRRR 1949
R +R+ R+ Q + +R R + D++R R+R +KE E++++R R+R
Sbjct: 230 RERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQR 289
Query: 1950 ----DRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDS-RNVDKKPDKPKSEDY 2004
DR ++ R+R+ E +++ R R +R + + R++ R+ +K+ ++ +
Sbjct: 290 RTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQT 349
Query: 2005 EKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
E D+ER + REG + +R + DR ++
Sbjct: 350 EMDRERNRQTGREGRRQAERERERERERDRQSAR 383
Score = 60.1 bits (144), Expect = 2e-08
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 54/204 (26%)
Query: 1889 DIRRPERRHSDPWGRQD---QQQLDRPFNRGKG-----DRQRFYSDSHHLKRERH-EKEW 1939
D +R RR D ++D ++Q DR R + DRQR + +RER E+E
Sbjct: 76 DRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREG 135
Query: 1940 EQ--------ESERHRRRD----RSQDKDRDRKSREEGHKDKERARLS------------ 1975
E+ + ER R+RD R + DR+R+ + E ++ KER R
Sbjct: 136 ERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQR 195
Query: 1976 ---------HGDRGTDGKASRDS-------RNVDKKPDKPKSEDYEKDK--EREKSKHRE 2017
H +RG + + R++ R D++ D+ + + E++K ERE++ RE
Sbjct: 196 EKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERE 255
Query: 2018 GEKDRDRYH---KDRDHTDRTKSK 2038
E+D++R +DRD R K +
Sbjct: 256 TERDKERERERDRDRDRDRRQKER 279
Score = 60.1 bits (144), Expect = 2e-08
Identities = 38/151 (25%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
R+ ER R+ Q++ +R + +R+R + RER+ ++ +E R R+
Sbjct: 315 RKRERERERERERERQRETERDREK---ERERKRKRQTEMDRERN-RQTGREGRRQAERE 370
Query: 1951 RSQDKDRDRKS---REEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKD 2007
R ++++RDR+S REE +D++R R +R T+ K R +K+ ++ K + E+
Sbjct: 371 RERERERDRQSAREREERERDRDRDRQKERERQTE-KDRDGQRETEKQREREKDRESERG 429
Query: 2008 KEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
+ER + + ++ ++RDR + R + +
Sbjct: 430 RERGREREKQKGRERDRERQTDRQAGRQRKR 460
Score = 59.3 bits (142), Expect = 4e-08
Identities = 43/173 (24%), Positives = 87/173 (50%), Gaps = 17/173 (9%)
Query: 1882 QNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERH------ 1935
+N + ++ RR +R+ R+ +++ ++ +R K DR R +RER
Sbjct: 56 RNRQKERERRREKRQTERETDRKRERRREKDRHR-KRDRHRERQRDREKERERQTDRERD 114
Query: 1936 ---EKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDS-RN 1991
EKE ++ ER R +R ++ RDR++ + ++++R +R TD + R + RN
Sbjct: 115 RQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERN 174
Query: 1992 VDKKPDKPKSEDYEKDKEREKSKH-----REGEKDRDRYHKDRDHTDRTKSKR 2039
K+ ++ K+ +++ER++ K R E+ R+R ++R+ T+ KR
Sbjct: 175 RQKEREREKNRQERRERERQREKENKTEDRHSERGRER-ERERETETETERKR 226
Score = 46.6 bits (109), Expect = 2e-04
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 1903 RQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEK-----EWEQESERHRRRDRSQDKDR 1957
R+ +++ DR R + +R+R +RER + + E E +R R +DR ++ R
Sbjct: 371 RERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGR 430
Query: 1958 DRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKER 2010
+R E K +ER R DR + R + V+ P +S + D R
Sbjct: 431 ERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPPRTARSGVVQSDPNR 483
Score = 39.3 bits (90), Expect = 0.040
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 1874 QASRYIGPQNFYQVKDIRRPERRHSDPWGRQ-DQQQLDRPFNRGKGDRQRFYSDSHHLKR 1932
+ +R G + Q + R ER R+ ++++ DR +R K +R+R +R
Sbjct: 354 ERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQK-ERERQTEKDRDGQR 412
Query: 1933 E---RHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERAR 1973
E + E+E ++ESER R R R ++K + R+ E D++ R
Sbjct: 413 ETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGR 456
Score = 35.4 bits (80), Expect = 0.57
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 1947 RRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEK 2006
RRR SQ+ R R+ + HKD + DR + + R+ R +K + D ++
Sbjct: 28 RRRPGSQESPR-RRGLGQAHKDADG-----DDRERNRQKERERRR--EKRQTERETDRKR 79
Query: 2007 DKEREKSKHREGEKDRDR-YHKDRD-----HTDRTKSKR 2039
++ REK +HR+ +DR R +DR+ TDR + ++
Sbjct: 80 ERRREKDRHRK--RDRHRERQRDREKERERQTDRERDRQ 116
>gi|239749424 PREDICTED: hypothetical protein XP_002347041 [Homo
sapiens]
Length = 287
Score = 73.6 bits (179), Expect = 2e-12
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Query: 869 SEEKSEKIPKESTTVTCTGEKASKPGTHEKQEMKKKKVEKGVLNVHPAASASKPS-ADQI 927
S EK K+ +T ++ + + +K E + + ++ PS +D +
Sbjct: 67 STEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSV 126
Query: 928 RQSVRHSLKDILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFN 987
R R L L R D + + ++ ++ ++IE+ ++ R+TD KYKN+ RS + N
Sbjct: 127 RLKCREMLAAAL--RTGDDYIAIGADEE-ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 183
Query: 988 LKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTI 1035
LKD KN L K VL G + PD RM+ EE+AS EL R+ + I
Sbjct: 184 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 231
>gi|5803191 transcription elongation factor A 1 isoform 1 [Homo
sapiens]
Length = 301
Score = 73.6 bits (179), Expect = 2e-12
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Query: 869 SEEKSEKIPKESTTVTCTGEKASKPGTHEKQEMKKKKVEKGVLNVHPAASASKPS-ADQI 927
S EK K+ +T ++ + + +K E + + ++ PS +D +
Sbjct: 81 STEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSV 140
Query: 928 RQSVRHSLKDILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFN 987
R R L L R D + + ++ ++ ++IE+ ++ R+TD KYKN+ RS + N
Sbjct: 141 RLKCREMLAAAL--RTGDDYIAIGADEE-ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 197
Query: 988 LKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTI 1035
LKD KN L K VL G + PD RM+ EE+AS EL R+ + I
Sbjct: 198 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 245
>gi|45439355 transcription elongation factor A 1 isoform 2 [Homo
sapiens]
Length = 280
Score = 73.6 bits (179), Expect = 2e-12
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 4/168 (2%)
Query: 869 SEEKSEKIPKESTTVTCTGEKASKPGTHEKQEMKKKKVEKGVLNVHPAASASKPS-ADQI 927
S EK K+ +T ++ + + +K E + + ++ PS +D +
Sbjct: 60 STEKDLDEKKKEPAITSQNSPEAREESTSSGNVSNRKDETNARDTYVSSFPRAPSTSDSV 119
Query: 928 RQSVRHSLKDILMKRLTDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFN 987
R R L L R D + + ++ ++ ++IE+ ++ R+TD KYKN+ RS + N
Sbjct: 120 RLKCREMLAAAL--RTGDDYIAIGADEE-ELGSQIEEAIYQEIRNTDMKYKNRVRSRISN 176
Query: 988 LKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTI 1035
LKD KN L K VL G + PD RM+ EE+AS EL R+ + I
Sbjct: 177 LKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAI 224
>gi|169167715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 72.8 bits (177), Expect = 3e-12
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 15/163 (9%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRG-KGDRQRFYSDSHHLKRER-----HEKEWEQESE 1944
R +R+ + R+ +++++ +R K DR+R KRER E E E++ E
Sbjct: 66 RERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDRDRKRERWGDRDRETETERQEE 125
Query: 1945 RHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDY 2004
R R+RDR ++KDR+R+ + E DK+R + DR + + R D++ ++ K +
Sbjct: 126 RERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDRERERQKQRET 185
Query: 2005 EKDKEREKSKHREG---------EKDRDRYHKDRDHTDRTKSK 2038
+D++RE+ + +E E+++DRY + DR K +
Sbjct: 186 RRDRDRERQREKEDRERDRDRQKEREKDRYRERETGRDRDKER 228
Score = 59.7 bits (143), Expect = 3e-08
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
Query: 1903 RQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDK--DRDRK 1960
R+ Q++ +R R K +R R R+R K ++E +R R RDR +++ DRDR+
Sbjct: 60 RERQRERERQRKRAK-ERHREKDREIEKDRDRQRKR-DRERQRWRDRDRKRERWGDRDRE 117
Query: 1961 SREEGHKDKERARLSHGDRGTDGKASRD-----SRNVDKKPDKPKSEDY-----EKDKER 2010
+ E +++ER R ++ + + R+ R ++ + D+ + + +D+ER
Sbjct: 118 TETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDRDREREMGETERYRDRER 177
Query: 2011 EKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
E+ K RE +DRDR + R+ DR + +
Sbjct: 178 ERQKQRETRRDRDR-ERQREKEDRERDR 204
Score = 53.9 bits (128), Expect = 2e-06
Identities = 36/120 (30%), Positives = 67/120 (55%), Gaps = 15/120 (12%)
Query: 1931 KRERHEKEWEQESERHRRRDRSQD----KDRDRKSREEGH----KDKERARLSHGDRGTD 1982
+RER ++E E++ +R + R R +D KDRDR+ + + +D++R R GDR +
Sbjct: 59 ERER-QRERERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDRDRKRERWGDRDRE 117
Query: 1983 GKASRDSRNVDKKPDKPKSEDYEKDKERE----KSKHREGEKDRDRYHKDRDHTDRTKSK 2038
+ R +++ D+ + +D E+ ++RE K + E EKDRDR ++ T+R + +
Sbjct: 118 TETERQEER-ERQRDRKREKDRERQRQREIGIDKDREIETEKDRDR-EREMGETERYRDR 175
Score = 50.8 bits (120), Expect = 1e-05
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 1941 QESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPK 2000
+E ER R R+R + + ++R ++ +K+R R DR RD R ++ D+ +
Sbjct: 58 RERERQRERERQRKRAKERHREKDREIEKDRDRQRKRDRERQRWRDRD-RKRERWGDRDR 116
Query: 2001 SEDYEKDKEREKSKHREGEKDRDRYHK-----DRDHTDRTKSKR 2039
+ E+ +ERE+ + R+ EKDR+R + D+D T+ R
Sbjct: 117 ETETERQEERERQRDRKREKDRERQRQREIGIDKDREIETEKDR 160
Score = 38.1 bits (87), Expect = 0.089
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 1903 RQDQQQLDRPFNRGKG------DRQRFYSDSHHLKRERHEKEWEQESERHRRRDRS--QD 1954
R+ + + DR R G DR+R +R+R + ++ +R R RDR ++
Sbjct: 152 REIETEKDRDREREMGETERYRDRERERQKQRETRRDRDRERQREKEDRERDRDRQKERE 211
Query: 1955 KDRDRKSREEGHKDKERARLSHGDRGTDGKASRD 1988
KDR R+ +DKER R ++ D + + D
Sbjct: 212 KDRYRERETGRDRDKERDRERQREKDRDRQKAID 245
>gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 71.6 bits (174), Expect = 7e-12
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 37/234 (15%)
Query: 714 WTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCC--- 770
+ P+ C++PH NRFM+ C RC++WFHGDCVG+S ++ + + ++Y+C C
Sbjct: 264 YDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQ 323
Query: 771 AEEDKKTEILDPDTLENQATVEFHSGDKT-MECEKLG-LSKHTTNDR------TKYIDDT 822
+++ +E D Q ++ GD +C +G + + ++ D+ K + +
Sbjct: 324 VQDETHSETAD------QQEAKWRPGDADGTDCTSIGTIEQKSSEDQGIKGRIEKAANPS 377
Query: 823 VKHKVKILK---------RESGEG------RNSSDCRDNEIKKWQLAPLRKMGQPVLPRR 867
K K+KI + + G G +S C ++ I K A ++ + +
Sbjct: 378 GKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAAATMKFLSSGKEQKP 437
Query: 868 SSEEKSEKIPKESTTVTC---TGEKASKPGTHEKQEMKKKKVEKGVLNVHPAAS 918
+EK + P++ + C G K S E K+ V+K V V PA S
Sbjct: 438 KPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAV--VVPARS 489
>gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 71.6 bits (174), Expect = 7e-12
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 37/234 (15%)
Query: 714 WTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCC--- 770
+ P+ C++PH NRFM+ C RC++WFHGDCVG+S ++ + + ++Y+C C
Sbjct: 264 YDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQ 323
Query: 771 AEEDKKTEILDPDTLENQATVEFHSGDKT-MECEKLG-LSKHTTNDR------TKYIDDT 822
+++ +E D Q ++ GD +C +G + + ++ D+ K + +
Sbjct: 324 VQDETHSETAD------QQEAKWRPGDADGTDCTSIGTIEQKSSEDQGIKGRIEKAANPS 377
Query: 823 VKHKVKILK---------RESGEG------RNSSDCRDNEIKKWQLAPLRKMGQPVLPRR 867
K K+KI + + G G +S C ++ I K A ++ + +
Sbjct: 378 GKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAAATMKFLSSGKEQKP 437
Query: 868 SSEEKSEKIPKESTTVTC---TGEKASKPGTHEKQEMKKKKVEKGVLNVHPAAS 918
+EK + P++ + C G K S E K+ V+K V V PA S
Sbjct: 438 KPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAV--VVPARS 489
>gi|201023341 FIP1 like 1 isoform 3 [Homo sapiens]
Length = 520
Score = 70.5 bits (171), Expect = 2e-11
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 1820 PPNFPPQSMFGFPP-HLPPP-LLPPPGFGFAQNPMVPWPPVVHLPGQPQRMMGPLSQASR 1877
PP FPP G PP HLPPP LPPP P++P P PG P + P ++
Sbjct: 283 PPFFPP----GAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIES-- 336
Query: 1878 YIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEK 1937
G + Y + R + P+G + P G D+ K
Sbjct: 337 --GHSSGYDSRSAR------AFPYG-----NVAFPHLPGSAPSWPSLVDT--------SK 375
Query: 1938 EWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPD 1997
+W+ + R + RDR +D+DR+R + +D+ER R +R D + N D++
Sbjct: 376 QWDYYARREKDRDRERDRDRER----DRDRDRERERTRERERERDHSPTPSVFNSDEERY 431
Query: 1998 KPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+ + E E+ ER ++ + E+ R+R H++++ T R KS R
Sbjct: 432 RYR-EYAERGYERHRASREKEERHRERRHREKEET-RHKSSR 471
>gi|40254978 FIP1 like 1 isoform 1 [Homo sapiens]
Length = 594
Score = 70.5 bits (171), Expect = 2e-11
Identities = 63/222 (28%), Positives = 100/222 (45%), Gaps = 35/222 (15%)
Query: 1820 PPNFPPQSMFGFPP-HLPPP-LLPPPGFGFAQNPMVPWPPVVHLPGQPQRMMGPLSQASR 1877
PP FPP G PP HLPPP LPPP P++P P PG P + P ++
Sbjct: 357 PPFFPP----GAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIES-- 410
Query: 1878 YIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEK 1937
G + Y + R + P+G + P G D+ K
Sbjct: 411 --GHSSGYDSRSAR------AFPYG-----NVAFPHLPGSAPSWPSLVDT--------SK 449
Query: 1938 EWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPD 1997
+W+ + R + RDR +D+DR+R + +D+ER R +R D + N D++
Sbjct: 450 QWDYYARREKDRDRERDRDRER----DRDRDRERERTRERERERDHSPTPSVFNSDEERY 505
Query: 1998 KPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+ + E E+ ER ++ + E+ R+R H++++ T R KS R
Sbjct: 506 RYR-EYAERGYERHRASREKEERHRERRHREKEET-RHKSSR 545
>gi|41350335 transcription elongation factor A (SII), 3 [Homo sapiens]
Length = 348
Score = 69.3 bits (168), Expect = 4e-11
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 5/214 (2%)
Query: 831 KRESGEGRNSSDCRDNEIKKWQLAPLRKMGQPVLPRRSSEEKSEKIPKESTTVTCTGEKA 890
K E GE R + ++ ++ P + P R + + + + +S+ + +
Sbjct: 86 KGEKGEEREKAKKKEKGLECSDWKPEAGLSPPRKKREDPKTRRDSVDSKSSASSSPKRPS 145
Query: 891 SKPGTHEKQEMKKKKVEKGVLNVHPAASASKPSADQIR-QSVRHSLKDILMKRL-TDSNL 948
+ K + + K L A+S + + SVR ++L L D +
Sbjct: 146 VERSNSSKSKAESPKTPSSPLTPTFASSMCLLAPCYLTGDSVRDKCVEMLSAALKADDDY 205
Query: 949 KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPD 1008
K K+A++IE ++ + TD KY+N+ RS + NLKDP+N L + VL G ++
Sbjct: 206 KDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAG 265
Query: 1009 HLIRMSPEELASKELAAWRRRENRHTIEMIEKEQ 1042
+ +M+ EE+AS EL R N T E I + Q
Sbjct: 266 LIAKMTAEEMASDEL---RELRNAMTQEAIREHQ 296
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 68.9 bits (167), Expect = 5e-11
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 11/146 (7%)
Query: 1902 GRQDQQQLDRPFNRGKG-----DRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKD 1956
GR+ ++ DR R + D QR RER EK+ E+E+ER R R R +K+
Sbjct: 140 GRERERDRDREKERERQTEKDRDGQRETETERERDRER-EKQKERETERDRDRQRDTEKE 198
Query: 1957 RDRKSREEGHKDKERARLSHGDRGTDGKASRDS---RNVDKKPDKPKSEDYEKDKEREKS 2013
R+R++ E +D++R + R TD + R++ R + D+ K D E+D++ E+
Sbjct: 199 RERQTDRE--RDRQRKTQTERQRETDREGERETDRRRERQRDRDRGKERDRERDRKEERK 256
Query: 2014 KHREGEKDRDRYHKDRDHTDRTKSKR 2039
K R+ E+ ++R K ++ R KR
Sbjct: 257 KERKKERKKERKEKKKEEKRREDKKR 282
Score = 68.2 bits (165), Expect = 8e-11
Identities = 50/160 (31%), Positives = 82/160 (51%), Gaps = 23/160 (14%)
Query: 1902 GRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQ-------D 1954
GR Q+ R + G+ + D +R+R ++ E+E +R R+RDR + +
Sbjct: 52 GRLGSQESPRSWGLGQAHKDAD-GDDRQRERDRVREKTEKERDRDRKRDRERRRKEKETN 110
Query: 1955 KDRDRKSREEGHKDKER----ARLSHGDRGTDGKASRD-----SRNVDKKPD--KPKSED 2003
++RDR+ + E +D+ER R DRG + + RD R +K D + +
Sbjct: 111 RNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETE 170
Query: 2004 YEKDKEREKSKHREGEKDRDRY---HKDRD-HTDRTKSKR 2039
E+D+EREK K RE E+DRDR K+R+ TDR + ++
Sbjct: 171 RERDREREKQKERETERDRDRQRDTEKERERQTDRERDRQ 210
Score = 65.9 bits (159), Expect = 4e-10
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 16/154 (10%)
Query: 1897 HSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRR----RDRS 1952
H D G Q++ DR R K +++R +R R EKE + +R ++ RDR
Sbjct: 69 HKDADGDDRQRERDRV--REKTEKERDRDRKRDRERRRKEKETNRNRDREKQTEIERDRE 126
Query: 1953 QDK------DRDRKSREEGHKDKERARLSHGDRGTDGKASRDS-RNVDKKPDKPKSEDYE 2005
++K +RDR E +D+E+ R ++ DG+ ++ R D++ +K K + E
Sbjct: 127 REKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQKERETE 186
Query: 2006 KDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+D++R++ +E E+ DR +RD +T+++R
Sbjct: 187 RDRDRQRDTEKERERQTDR---ERDRQRKTQTER 217
Score = 61.2 bits (147), Expect = 1e-08
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHR 1947
++ RR E+ + R+ Q +++R R K + D + ++E E+E + +
Sbjct: 100 RERRRKEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEK 159
Query: 1948 RRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKD 2007
RD ++ + +R+ E K KER DR D + R+ R D++ D+ + E+
Sbjct: 160 DRDGQRETETERERDREREKQKERETERDRDRQRDTEKERE-RQTDRERDRQRKTQTERQ 218
Query: 2008 K------EREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+ ERE + RE ++DRDR K+RD K +R
Sbjct: 219 RETDREGERETDRRRERQRDRDR-GKERDRERDRKEER 255
Score = 59.3 bits (142), Expect = 4e-08
Identities = 34/148 (22%), Positives = 80/148 (54%), Gaps = 3/148 (2%)
Query: 1894 ERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHE-KEWEQESERHRRRDRS 1952
+ R D +++++ ++ NR + DR++ +RE+ + +E E++ R R RDR
Sbjct: 90 KERDRDRKRDRERRRKEKETNRNR-DREKQTEIERDREREKQKGRERERDRGRERERDRD 148
Query: 1953 QDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDS-RNVDKKPDKPKSEDYEKDKERE 2011
++K+R+R++ ++ +E DR + + R++ R+ D++ D K + + D+ER+
Sbjct: 149 REKERERQTEKDRDGQRETETERERDREREKQKERETERDRDRQRDTEKERERQTDRERD 208
Query: 2012 KSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+ + + E+ R+ + TDR + ++
Sbjct: 209 RQRKTQTERQRETDREGERETDRRRERQ 236
Score = 49.3 bits (116), Expect = 4e-05
Identities = 28/110 (25%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 1903 RQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERH-EKEWEQESERHRRRDRSQDKDRDRKS 1961
R+ ++Q +R R + DRQR + +R +++ + ++ER R DR +++ DR+
Sbjct: 175 REREKQKERETERDR-DRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRRR 233
Query: 1962 REEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKERE 2011
+ +D+ + R DR + K R ++ +K K E +DK+R+
Sbjct: 234 ERQRDRDRGKERDRERDRKEERKKERKKERKKERKEKKKEEKRREDKKRK 283
Score = 42.7 bits (99), Expect = 0.004
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 22/134 (16%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERH---EKEWEQESE 1944
+D R +++ + +D+Q+ + DR+R +R+R E E E +
Sbjct: 173 RDREREKQKERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGERETDRR 232
Query: 1945 RHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDY 2004
R R+RDR + K+RDR+ + + KER + ++K ++ + +
Sbjct: 233 RERQRDRDRGKERDRERDRKEERKKERKK-------------------ERKKERKEKKKE 273
Query: 2005 EKDKEREKSKHREG 2018
EK +E +K K EG
Sbjct: 274 EKRREDKKRKWGEG 287
Score = 33.1 bits (74), Expect = 2.8
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 1874 QASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGK-GDRQRFYSDSHHLKR 1932
Q R Q Q + R +R R+ ++Q DR +RGK DR+R ++
Sbjct: 202 QTDRERDRQRKTQTERQRETDREGERETDRRRERQRDR--DRGKERDRERD-------RK 252
Query: 1933 ERHEKEWEQESERHRRRDRSQDKDRDRKSREEG 1965
E +KE ++E ++ R+ + ++K R+ K R+ G
Sbjct: 253 EERKKERKKERKKERKEKKKEEKRREDKKRKWG 285
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a [Homo
sapiens]
Length = 624
Score = 68.6 bits (166), Expect = 6e-11
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 1888 KDIRR---PERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESE 1944
KD RR P ++ S R+ + ++ K R++ + +K + EKE E+E E
Sbjct: 346 KDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKI-KEKERVKEKDREKEREREKE 404
Query: 1945 RHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDY 2004
R + ++R ++KDRD++ ++ KDKE+ D + R+ + +K DK K ++
Sbjct: 405 REKEKERGKNKDRDKEREKDREKDKEK----------DREREREKEH-EKDRDKEKEKEQ 453
Query: 2005 EKDKEREKSKHREGEKDRDRYHKDR 2029
+K+KEREK + +E ++ R + K R
Sbjct: 454 DKEKEREKDRSKEIDEKRKKDKKSR 478
Score = 62.8 bits (151), Expect = 3e-09
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 1914 NRGKGDRQRFY--SDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHK--DK 1969
N KG R R + S S + ++ Q R R +RS+ + +DR+ + HK K
Sbjct: 301 NERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSK 360
Query: 1970 ERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDR 2029
R R R +D+R K+ ++ K +D EK++EREK + +E E+ +++
Sbjct: 361 SRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKE 420
Query: 2030 DHTDRTKSK 2038
DR K K
Sbjct: 421 REKDREKDK 429
Score = 59.7 bits (143), Expect = 3e-08
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 1895 RRHSDPWGRQ-DQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQ 1953
R H+ RQ D+++ P + R+R S S R++ + E+ E+ R +++ +
Sbjct: 336 RSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDR 395
Query: 1954 DKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKS 2013
+K+R+R+ E K+KER GK + +K +K K +D E+++E+E
Sbjct: 396 EKEREREKERE--KEKER-----------GKNKDRDKEREKDREKDKEKDREREREKEHE 442
Query: 2014 KHREGEKDRDRYHKDRDHTDRTK 2036
K R+ EK++++ + DR+K
Sbjct: 443 KDRDKEKEKEQDKEKEREKDRSK 465
Score = 58.5 bits (140), Expect = 6e-08
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 1903 RQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHE---------KEWEQESERHRRRDRSQ 1953
R + + +R K + + S SH+ R R + K+ + ER + R RS
Sbjct: 313 RSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSH 372
Query: 1954 DKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKS 2013
+D+ + +RE K KE+ R+ DR + R +K+ +K K KD+++E+
Sbjct: 373 SRDKRKDTRE---KIKEKERVKEKDREKE-------REREKEREKEKERGKNKDRDKERE 422
Query: 2014 KHREGEKDRDR-YHKDRDH-TDRTKSK 2038
K RE +K++DR ++++H DR K K
Sbjct: 423 KDREKDKEKDREREREKEHEKDRDKEK 449
Score = 55.8 bits (133), Expect = 4e-07
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
R E+ R +++ DR ++ K DR+R H R++ EKE EQ+ E+ R +D
Sbjct: 405 REKEKERGKNKDRDKEREKDREKDKEK-DREREREKEHEKDRDK-EKEKEQDKEKEREKD 462
Query: 1951 RSQDKD----RDRKSR--EEGHKDKERARLSHGDR-----GTDGKASRDSRNVDKKPDK- 1998
RS++ D +D+KSR + R+R S +R + ++ R S+ + +K +
Sbjct: 463 RSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS 522
Query: 1999 --PKSEDYEKDKEREK-----SKHREGEKDRDRYHKDRDHTDRTKSKR 2039
P+S + +KDK+REK S+ RE E+ D + K ++
Sbjct: 523 PSPRSRN-KKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEK 569
Score = 47.8 bits (112), Expect = 1e-04
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 1903 RQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSR 1962
R+ +++ ++ RGK + D K +KE ++E ER + ++ +DK+++++
Sbjct: 399 REREKEREKEKERGKNKDR----DKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQD 454
Query: 1963 EEGHKDKERARLSHGDRGTDGK---------ASRDSRNVDKKPDKPK----------SED 2003
+E ++K+R++ R D K ASR SR+ ++ + + S+
Sbjct: 455 KEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKT 514
Query: 2004 YEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
++ R S +KD+ R K+RDH + +
Sbjct: 515 IKRKSSRSPSPRSRNKKDKKR-EKERDHISERRER 548
Score = 45.8 bits (107), Expect = 4e-04
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 1936 EKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD-SRNVDK 1994
E E + +ER R RS + + R S + H ++R++ H R + SR R K
Sbjct: 294 EPESGKSNERKGGRSRSHTRSKSRSS-SKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSK 352
Query: 1995 KPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHT---DRTKSK 2038
P K +S+ E+ K R +S R+ KD K+++ DR K +
Sbjct: 353 SPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKER 399
Score = 33.5 bits (75), Expect = 2.2
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 1886 QVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQ-RFYSDSHHLKRERHEKEWEQESE 1944
++ + R+ +++ P + + R +R + R+ R S S + K S
Sbjct: 466 EIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSP 525
Query: 1945 RHR-RRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSED 2003
R R ++D+ ++K+RD S + R S DR DGK ++K K ++
Sbjct: 526 RSRNKKDKKREKERDHISERRERERSTSMRKSSNDR--DGK-----EKLEKNSTSLKEKE 578
Query: 2004 YEKDKEREKSKHREGEKDRDRYHKDR 2029
+ K+ + SK + +KD R +++
Sbjct: 579 HNKEPDSSVSKEVD-DKDAPRTEENK 603
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [Homo
sapiens]
Length = 508
Score = 68.6 bits (166), Expect = 6e-11
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 1888 KDIRR---PERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESE 1944
KD RR P ++ S R+ + ++ K R++ + +K + EKE E+E E
Sbjct: 230 KDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKI-KEKERVKEKDREKEREREKE 288
Query: 1945 RHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDY 2004
R + ++R ++KDRD++ ++ KDKE+ D + R+ + +K DK K ++
Sbjct: 289 REKEKERGKNKDRDKEREKDREKDKEK----------DREREREKEH-EKDRDKEKEKEQ 337
Query: 2005 EKDKEREKSKHREGEKDRDRYHKDR 2029
+K+KEREK + +E ++ R + K R
Sbjct: 338 DKEKEREKDRSKEIDEKRKKDKKSR 362
Score = 62.8 bits (151), Expect = 3e-09
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 1914 NRGKGDRQRFY--SDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHK--DK 1969
N KG R R + S S + ++ Q R R +RS+ + +DR+ + HK K
Sbjct: 185 NERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSK 244
Query: 1970 ERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDR 2029
R R R +D+R K+ ++ K +D EK++EREK + +E E+ +++
Sbjct: 245 SRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKE 304
Query: 2030 DHTDRTKSK 2038
DR K K
Sbjct: 305 REKDREKDK 313
Score = 59.7 bits (143), Expect = 3e-08
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 1895 RRHSDPWGRQ-DQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQ 1953
R H+ RQ D+++ P + R+R S S R++ + E+ E+ R +++ +
Sbjct: 220 RSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDR 279
Query: 1954 DKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKS 2013
+K+R+R+ E K+KER GK + +K +K K +D E+++E+E
Sbjct: 280 EKEREREKERE--KEKER-----------GKNKDRDKEREKDREKDKEKDREREREKEHE 326
Query: 2014 KHREGEKDRDRYHKDRDHTDRTK 2036
K R+ EK++++ + DR+K
Sbjct: 327 KDRDKEKEKEQDKEKEREKDRSK 349
Score = 58.5 bits (140), Expect = 6e-08
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 1903 RQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHE---------KEWEQESERHRRRDRSQ 1953
R + + +R K + + S SH+ R R + K+ + ER + R RS
Sbjct: 197 RSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSH 256
Query: 1954 DKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKS 2013
+D+ + +RE K KE+ R+ DR + R +K+ +K K KD+++E+
Sbjct: 257 SRDKRKDTRE---KIKEKERVKEKDREKE-------REREKEREKEKERGKNKDRDKERE 306
Query: 2014 KHREGEKDRDR-YHKDRDH-TDRTKSK 2038
K RE +K++DR ++++H DR K K
Sbjct: 307 KDREKDKEKDREREREKEHEKDRDKEK 333
Score = 55.8 bits (133), Expect = 4e-07
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 22/168 (13%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
R E+ R +++ DR ++ K DR+R H R++ EKE EQ+ E+ R +D
Sbjct: 289 REKEKERGKNKDRDKEREKDREKDKEK-DREREREKEHEKDRDK-EKEKEQDKEKEREKD 346
Query: 1951 RSQDKD----RDRKSR--EEGHKDKERARLSHGDR-----GTDGKASRDSRNVDKKPDK- 1998
RS++ D +D+KSR + R+R S +R + ++ R S+ + +K +
Sbjct: 347 RSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS 406
Query: 1999 --PKSEDYEKDKEREK-----SKHREGEKDRDRYHKDRDHTDRTKSKR 2039
P+S + +KDK+REK S+ RE E+ D + K ++
Sbjct: 407 PSPRSRN-KKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEK 453
Score = 47.8 bits (112), Expect = 1e-04
Identities = 34/155 (21%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 1903 RQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSR 1962
R+ +++ ++ RGK + D K +KE ++E ER + ++ +DK+++++
Sbjct: 283 REREKEREKEKERGKNKDR----DKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQD 338
Query: 1963 EEGHKDKERARLSHGDRGTDGK---------ASRDSRNVDKKPDKPK----------SED 2003
+E ++K+R++ R D K ASR SR+ ++ + + S+
Sbjct: 339 KEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKT 398
Query: 2004 YEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
++ R S +KD+ R K+RDH + +
Sbjct: 399 IKRKSSRSPSPRSRNKKDKKR-EKERDHISERRER 432
Score = 45.8 bits (107), Expect = 4e-04
Identities = 31/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 1936 EKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD-SRNVDK 1994
E E + +ER R RS + + R S + H ++R++ H R + SR R K
Sbjct: 178 EPESGKSNERKGGRSRSHTRSKSRSS-SKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSK 236
Query: 1995 KPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHT---DRTKSK 2038
P K +S+ E+ K R +S R+ KD K+++ DR K +
Sbjct: 237 SPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKER 283
Score = 33.5 bits (75), Expect = 2.2
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 10/146 (6%)
Query: 1886 QVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQ-RFYSDSHHLKRERHEKEWEQESE 1944
++ + R+ +++ P + + R +R + R+ R S S + K S
Sbjct: 350 EIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSP 409
Query: 1945 RHR-RRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSED 2003
R R ++D+ ++K+RD S + R S DR DGK ++K K ++
Sbjct: 410 RSRNKKDKKREKERDHISERRERERSTSMRKSSNDR--DGK-----EKLEKNSTSLKEKE 462
Query: 2004 YEKDKEREKSKHREGEKDRDRYHKDR 2029
+ K+ + SK + +KD R +++
Sbjct: 463 HNKEPDSSVSKEVD-DKDAPRTEENK 487
>gi|201023339 FIP1 like 1 isoform 2 [Homo sapiens]
Length = 588
Score = 67.4 bits (163), Expect = 1e-10
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 36/231 (15%)
Query: 1812 PPGFPFPGPPNFPPQSMFGFPP---HLPPPLLPPPGFGFAQNPMVPWPPVVHLPGQPQRM 1868
PP FP PP P F PP PPL+PPPG VP P PG P
Sbjct: 342 PPFFPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPIT----VPPPGFPPPPGAPPPS 397
Query: 1869 MGPLSQASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSH 1928
+ P ++ G + Y + R + P+G + P G D+
Sbjct: 398 LIPTIES----GHSSGYDSRSAR------AFPYG-----NVAFPHLPGSAPSWPSLVDT- 441
Query: 1929 HLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD 1988
K+W+ + R + RDR +D+DR+R + +D+ER R +R D +
Sbjct: 442 -------SKQWDYYARREKDRDRERDRDRER----DRDRDRERERTRERERERDHSPTPS 490
Query: 1989 SRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
N D++ + + E E+ ER ++ + E+ R+R H++++ T R KS R
Sbjct: 491 VFNSDEERYRYR-EYAERGYERHRASREKEERHRERRHREKEET-RHKSSR 539
Score = 58.2 bits (139), Expect = 8e-08
Identities = 62/272 (22%), Positives = 115/272 (42%), Gaps = 53/272 (19%)
Query: 1788 SPRTSTNFSPMRPQQPNLQHLKSSPPGFPFPG------PPNFPPQSMFGFPPHLPPPLLP 1841
+P T P P P + ++PP P PG PP FPP PP PPP L
Sbjct: 349 APPTHLPPPPFLPPPPTVS---TAPPLIPPPGIPITVPPPGFPP------PPGAPPPSLI 399
Query: 1842 P-------PGFGFAQNPMVPWPPVV--HLPGQPQRMMGPLSQASRYIGPQNFYQVKDIRR 1892
P G+ P+ V HLPG + + ++ ++Y ++ R
Sbjct: 400 PTIESGHSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQW----DYYARREKDR 455
Query: 1893 PERRHSDPWGRQDQQQLDRPFNRGK-GDRQRFYSDSHHL-----KRERHEKEWEQESERH 1946
R D R+ + DR R + +R+R +S + + +R R+ + E+ ERH
Sbjct: 456 DRERDRD---RERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERH 512
Query: 1947 RRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEK 2006
R ++++ + RE H++KE R K+SR N ++ + + + + +
Sbjct: 513 R-----ASREKEERHRERRHREKEETR---------HKSSRS--NSRRRHESEEGDSHRR 556
Query: 2007 DKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
K ++ + +EG++ +++ T+ T ++
Sbjct: 557 HKHKKSKRSKEGKEAGSEPAPEQESTEATPAE 588
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 66.6 bits (161), Expect = 2e-10
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 7/151 (4%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRE-RHEKEWEQESERHRRR 1949
R ER R+ ++Q DR +G+RQR +RE E++ E+E++RH
Sbjct: 50 RDRERNRERDRDREREKQTDR-----EGERQRERERDRDRQRETERERDKERETDRHTET 104
Query: 1950 DRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKE 2009
DR + K ++R+ +++E+ + +R TD + R+ ++ + E +D+
Sbjct: 105 DRERQKQKEREMERVRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRH 164
Query: 2010 REKSKHREGEKDRDRYHKDRD-HTDRTKSKR 2039
RE+ + R+ E++R R K+R+ HTD + ++
Sbjct: 165 RERERERKRERERKRETKERERHTDMERERQ 195
Score = 62.0 bits (149), Expect = 6e-09
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 20/148 (13%)
Query: 1892 RPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDR 1951
+ E RH+ +Q +R R + DR+R R + K ++ SER R+RDR
Sbjct: 4 KTEGRHTHTETETMDRQRER---RRETDRER--------DRAKESKTEDRHSERDRQRDR 52
Query: 1952 SQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD-SRNVDKKPDKPKSED--YEKDK 2008
++++RDR E D+E G+R + + RD R +++ DK + D E D+
Sbjct: 53 ERNRERDRDREREKQTDRE------GERQRERERDRDRQRETERERDKERETDRHTETDR 106
Query: 2009 EREKSKHREGEKDRDRYHKDRDHTDRTK 2036
ER+K K RE E+ RDR + + R +
Sbjct: 107 ERQKQKEREMERVRDREREKQKEMGRER 134
Score = 60.1 bits (144), Expect = 2e-08
Identities = 38/139 (27%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Query: 1903 RQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSR 1962
R+ +++ DR +R K + ++ H +R+R +++ E+ ER R R+R + DR+ + +
Sbjct: 21 RERRRETDRERDRAKESK----TEDRHSERDR-QRDRERNRERDRDREREKQTDREGERQ 75
Query: 1963 EEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYE--KDKEREKSKHREGEK 2020
E +D++R R + +R + + R + D++ K K + E +D+EREK K E+
Sbjct: 76 RERERDRDRQRETERERDKERETDRHT-ETDRERQKQKEREMERVRDREREKQKEMGRER 134
Query: 2021 DRDRYHKDRDHTDRTKSKR 2039
DR DR+ + + +R
Sbjct: 135 QTDR-ETDRERERQAERER 152
Score = 58.5 bits (140), Expect = 6e-08
Identities = 42/156 (26%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 1888 KDIRRPERRHSDPWG-RQDQQQLDRPFNRG---KGDRQRFYSDSHHLKRERHEKEWEQES 1943
+D R + +D G RQ +++ DR R + D++R +D H +K+ E+E
Sbjct: 58 RDRDREREKQTDREGERQRERERDRDRQRETERERDKER-ETDRHTETDRERQKQKEREM 116
Query: 1944 ERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSED 2003
ER R R+R + K+ R+ + + D+ER R + +R T + + R+ +++ ++ K E
Sbjct: 117 ERVRDREREKQKEMGRERQTDRETDRERERQAERERETGRERKTEDRHRERERER-KRER 175
Query: 2004 YEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
K + +E+ +H + E++R R DR + +S+R
Sbjct: 176 ERKRETKERERHTDMERERQR-ETDRKRDRQRESER 210
Score = 55.8 bits (133), Expect = 4e-07
Identities = 34/136 (25%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRER-HEKEWEQESERHRRR 1949
R +R+ R +++ DR + DR+R ++R R E+E ++E R R+
Sbjct: 80 RDRDRQRETERERDKERETDR---HTETDRERQKQKEREMERVRDREREKQKEMGRERQT 136
Query: 1950 DRSQDKDRDRKSREEGHKDKERARLS-HGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDK 2008
DR D++R+R++ E +ER H +R + K R+ + K+ ++ + E+ +
Sbjct: 137 DRETDRERERQAERERETGRERKTEDRHRERERERKRERERKRETKERERHTDMERERQR 196
Query: 2009 EREKSKHREGEKDRDR 2024
E ++ + R+ E +R+R
Sbjct: 197 ETDRKRDRQRESERER 212
Score = 47.0 bits (110), Expect = 2e-04
Identities = 30/111 (27%), Positives = 58/111 (52%), Gaps = 12/111 (10%)
Query: 1940 EQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHG-DRGTDGKASRDSRNVDKKPDK 1998
E ++E ++ DR R+ R E ++++RA+ S DR ++ RD R +++ D+
Sbjct: 2 ESKTEGRHTHTETETMDRQRERRRETDRERDRAKESKTEDRHSERDRQRD-RERNRERDR 60
Query: 1999 PKSEDYEKDKEREKSKHREGEKDRDR-YHKDRD---------HTDRTKSKR 2039
+ + + D+E E+ + RE ++DR R ++RD TDR + K+
Sbjct: 61 DREREKQTDREGERQRERERDRDRQRETERERDKERETDRHTETDRERQKQ 111
Score = 45.1 bits (105), Expect = 7e-04
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 1886 QVKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESER 1945
+++ +R ER GR ++Q DR +R +R+R RER ++ +E ER
Sbjct: 115 EMERVRDREREKQKEMGR--ERQTDRETDR---ERERQAERERETGRERKTEDRHRERER 169
Query: 1946 HRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYE 2005
R+R+R ++ R+ K RE H D ER R R D+K D+ + + E
Sbjct: 170 ERKRER--ERKRETKERER-HTDMERER---------------QRETDRKRDRQRESERE 211
Query: 2006 KD 2007
+D
Sbjct: 212 RD 213
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 65.9 bits (159), Expect = 4e-10
Identities = 39/136 (28%), Positives = 74/136 (54%), Gaps = 11/136 (8%)
Query: 1906 QQQLDRPFNRGKG-DRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREE 1964
Q++ R +RGK +R+R R+R + + RHR+RDR +++DR +E
Sbjct: 4 QRERKRETDRGKETERER--------DRQRERENQTERENRHRQRDRHRERDRQTDREKE 55
Query: 1965 GHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDR 2024
+ KER R +R T+ + R R ++ ++ + D E+DK+R++ + RE +++R+R
Sbjct: 56 RERQKERDRQRQRERETERETER-QRERQRQRERKRQTDRERDKDRDRERKRETDRNRER 114
Query: 2025 YHK-DRDHTDRTKSKR 2039
K R+ +T+ +R
Sbjct: 115 NRKGGRERDKQTERER 130
Score = 63.5 bits (153), Expect = 2e-09
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 36/171 (21%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERH---------EKEWEQ 1941
R+ ER+ G++ +++ DR R + ++ H +R+RH EKE E+
Sbjct: 3 RQRERKRETDRGKETERERDRQRERENQTER----ENRHRQRDRHRERDRQTDREKERER 58
Query: 1942 ESER--------------HRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASR 1987
+ ER R+R+R + ++R R++ E KD++R R DR
Sbjct: 59 QKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDR-------- 110
Query: 1988 DSRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
+R ++K + + + E++++RE+ + R+ E++R R + + TDR + +
Sbjct: 111 -NRERNRKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQR 160
Score = 58.5 bits (140), Expect = 6e-08
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 19/169 (11%)
Query: 1882 QNFYQVKDIRRPERRHSD-PWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWE 1940
+N ++ +D R R +D R+ Q++ DR RQR +R+R E++ +
Sbjct: 34 ENRHRQRDRHRERDRQTDREKERERQKERDR-------QRQRERETERETERQR-ERQRQ 85
Query: 1941 QESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD---SRNVDKKPD 1997
+E +R R+R +D+DR+RK + ++++ R D+ T+ + R+ R +++
Sbjct: 86 RERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQ 145
Query: 1998 KPKSEDYEKDKER-------EKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+ + E D+ER E+ K R+ E+ ++R K ++ R KR
Sbjct: 146 RQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEEKRREDKKR 194
Score = 51.2 bits (121), Expect = 1e-05
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
R ER+ R+ ++Q DR ++ DR R RER+ K +E ++ R+
Sbjct: 74 RETERQRERQRQRERKRQTDRERDK---DRDRERKRETDRNRERNRKGG-RERDKQTERE 129
Query: 1951 RSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPD--KPKSEDYEKDK 2008
R ++++R R+ E + +ER R DR A R+ R ++K + K + E +++K
Sbjct: 130 RDRERERQRQRERERQRQRERKR--ETDRERQRWAEREERKKERKKERKKERKEKKKEEK 187
Query: 2009 EREKSKHREGE 2019
RE K + GE
Sbjct: 188 RREDKKRKWGE 198
Score = 50.4 bits (119), Expect = 2e-05
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 1940 EQESERHRRRDRSQD--KDRDRKSREEGHKDKE-----RARLSHGDRGTDGKASRD---- 1988
E++ ER R DR ++ ++RDR+ E ++E R R DR TD + R+
Sbjct: 2 ERQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKE 61
Query: 1989 ---SRNVDKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSK 2038
R +++ ++ E+ ++RE+ + + E+D+DR + + TDR + +
Sbjct: 62 RDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRER 114
Score = 43.9 bits (102), Expect = 0.002
Identities = 20/93 (21%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 1947 RRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEK 2006
R+R+R ++ DR +++ E + +ER + + R++R+ ++ D+ + D +
Sbjct: 3 RQRERKRETDRGKETERERDRQRER----------ENQTERENRH--RQRDRHRERDRQT 50
Query: 2007 DKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
D+E+E+ + +E ++ R R + T+R + ++
Sbjct: 51 DREKERERQKERDRQRQRERETERETERQRERQ 83
Score = 39.3 bits (90), Expect = 0.040
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
Query: 1888 KDIRRPERRHSD-------PWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRER------ 1934
KD R +R +D GR+ +Q +R +R + +RQR +RER
Sbjct: 98 KDRDRERKRETDRNRERNRKGGRERDKQTERERDRER-ERQRQRERERQRQRERKRETDR 156
Query: 1935 HEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHG 1977
+ W + ER + R + + K+R K +EE ++ ++ + G
Sbjct: 157 ERQRWAEREERKKERKKERKKERKEKKKEEKRREDKKRKWGEG 199
>gi|155030236 ribonuclease III, nuclear isoform 2 [Homo sapiens]
Length = 1337
Score = 65.5 bits (158), Expect = 5e-10
Identities = 71/256 (27%), Positives = 103/256 (40%), Gaps = 45/256 (17%)
Query: 1795 FSPMRPQQP--NLQHLKSSPPG---FPF----------PGPPNFPPQSMFGFPPHLPPPL 1839
F PM P P N + +PPG FPF P PP P Q + +PP
Sbjct: 117 FPPMPPPMPCPNNPPVPGAPPGQGTFPFMMPPPSMPHPPPPPVMPQQVNYQYPPGYSHHN 176
Query: 1840 LPPPGFGFAQNPMVPWPPVVHLPGQPQ-RMMGPL---SQASRYIGPQNFYQVKDIRRPER 1895
PPP F QN + P + P R + P S P+ D R +
Sbjct: 177 FPPPSFNSFQNNPSSFLPSANNSSSPHFRHLPPYPLPKAPSERRSPERLKHYDDHRHRDH 236
Query: 1896 RHSDPWGRQDQQQ-LDRPFNRGKGDRQRF-------YSDSHHLKRER-HEKEWEQESERH 1946
H GR ++ + LDR DR+R Y R R +E+ E+E ERH
Sbjct: 237 SH----GRGERHRSLDRRERGRSPDRRRQDSRYRSDYDRGRTPSRHRSYERSRERERERH 292
Query: 1947 RRRD--------RSQDKDRDRKSREEGHKDKERARL-SHGDRGTDGKASRDSRNV----D 1993
R RD RS K+ R ++K+RAR DR +D ++S +N +
Sbjct: 293 RHRDNRRSPSLERSYKKEYKRSGSRSPSREKKRARWEEEKDRWSDNQSSGKDKNYTSIKE 352
Query: 1994 KKPDKPKSEDYEKDKE 2009
K+P++ + E+++E
Sbjct: 353 KEPEETMPDKNEEEEE 368
Score = 59.3 bits (142), Expect = 4e-08
Identities = 66/244 (27%), Positives = 90/244 (36%), Gaps = 61/244 (25%)
Query: 1797 PMRPQQPNLQHLKSSPPGFPFPGPPNFPPQSMFGFPPHLPPPLLPP-----PGFGF---- 1847
P+RP PN Q PFP PP FPP PP +P P PP PG G
Sbjct: 97 PIRPPFPNHQMRH------PFPVPPCFPPM-----PPPMPCPNNPPVPGAPPGQGTFPFM 145
Query: 1848 ---AQNPMVPWPPVV-------HLPGQPQRMMGPLSQASRYIGPQNFY-QVKDIRRPERR 1896
P P PPV+ + PG P S S P +F + P R
Sbjct: 146 MPPPSMPHPPPPPVMPQQVNYQYPPGYSHHNFPPPSFNSFQNNPSSFLPSANNSSSPHFR 205
Query: 1897 HSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDKD 1956
H P+ P R +R + Y D RH ERHR DR
Sbjct: 206 HLPPYPLPKA-----PSERRSPERLKHYDD------HRHRDHSHGRGERHRSLDR----- 249
Query: 1957 RDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKEREKSKHR 2016
R+R + + R R + DRG + P + +S + +++ERE+ +HR
Sbjct: 250 RERGRSPDRRRQDSRYRSDY-DRG-------------RTPSRHRSYERSRERERERHRHR 295
Query: 2017 EGEK 2020
+ +
Sbjct: 296 DNRR 299
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 63.5 bits (153), Expect = 2e-09
Identities = 56/209 (26%), Positives = 87/209 (41%), Gaps = 29/209 (13%)
Query: 1854 PWPPVVHLPGQPQRMMGPLSQASRYIGPQNFYQVKDIRRPERRHSDPWGRQDQQQLDRPF 1913
PW P+V G ++ GP + + R +R QD+++ D+
Sbjct: 1168 PWRPLVKPGGWREKEKA----REESWGPPRESRPSEEREWDREKERDRDNQDREENDKDP 1223
Query: 1914 NRGKGDRQRFYSDSHHLKRERHEKEWE----QESERHRRRDRSQDKDRDRKSRE-EGHKD 1968
R + DR+R +R R E W +ES R R D+DRD + RE + +D
Sbjct: 1224 ERER-DRERDVDREDRFRRPRDEGGWRRGPAEESSSWRDSSRRDDRDRDDRRRERDDRRD 1282
Query: 1969 KERARLSHGDRGTDGKASRDSRNV--------DKKPDKPKSED---------YEKDKERE 2011
R DR G R R D+K D+ + D +D+ER+
Sbjct: 1283 LRERRDLRDDRDRRGPPLRSEREEVSSWRRADDRKDDRVEERDPPRRVPPPALSRDRERD 1342
Query: 2012 KSKHREGEKDRD--RYHKDRDHTDRTKSK 2038
+ + REGEK++ R KDR+ RTK++
Sbjct: 1343 RDREREGEKEKASWRAEKDRESLRRTKNE 1371
Score = 41.2 bits (95), Expect = 0.010
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 17/170 (10%)
Query: 1882 QNFYQVK----DIRRPERRHSDPWGRQDQQQLDR--PFNRGKGDRQRFYSDSHHLK---- 1931
Q+ Y+ K + R E RH+ R+ Q++ +R + R K + ++ ++ LK
Sbjct: 769 QSVYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYYREKEEEEQRRAEEQMLKEREE 828
Query: 1932 RERHEKEWEQES--ERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDS 1989
RER E+ +E E R + ++ +R ++ RE +++ER R G + +DS
Sbjct: 829 RERAERAKREEELREYQERVKKLEEVERKKRQRELEIEERERRREEERRLGDSSLSRKDS 888
Query: 1990 RNVDKKPDKPKSEDYEKDKE-----REKSKHREGEKDRDRYHKDRDHTDR 2034
R D+ + + E D E EK R +D DR H+ + R
Sbjct: 889 RWGDRDSEGTWRKGPEADSEWRRGPPEKEWRRGEGRDEDRSHRRDEERPR 938
Score = 35.4 bits (80), Expect = 0.57
Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 10/160 (6%)
Query: 1889 DIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHR- 1947
D R P R D G + DR RG D + + ++ + R E ++ R+
Sbjct: 1085 DDRGPRRGMDDDRGPRRGMDDDRGPRRGLDDDRGPWRNADDDRIPRRGAEDDRGPWRNMD 1144
Query: 1948 --RRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYE 2005
R R D DR + ++ R + G KA +S ++ + +++
Sbjct: 1145 DDRLSRRADDDRFPRRGDDSRPGPWRPLVKPGGWREKEKAREESWGPPRESRPSEEREWD 1204
Query: 2006 KDKEREKSKH------REGEKDRDRYHKDRDHTDRTKSKR 2039
++KER++ ++ E++RDR +D D DR + R
Sbjct: 1205 REKERDRDNQDREENDKDPERERDR-ERDVDREDRFRRPR 1243
Score = 33.5 bits (75), Expect = 2.2
Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 28/145 (19%)
Query: 1889 DIRRPERRHSD---PWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESER 1945
D R P R D PW D +L R R DR D R + E+
Sbjct: 1125 DDRIPRRGAEDDRGPWRNMDDDRLSR---RADDDRFPRRGDDSRPGPWRPLVKPGGWREK 1181
Query: 1946 HRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYE 2005
+ R+ S R+ + EE D+E+ R + ++D DK P++ E
Sbjct: 1182 EKAREESWGPPRESRPSEEREWDREKER---------DRDNQDREENDKDPER------E 1226
Query: 2006 KDKEREKSKHREGEKDRDRYHKDRD 2030
+D+ER+ + DR+ + RD
Sbjct: 1227 RDRERDVDR-------EDRFRRPRD 1244
Score = 33.1 bits (74), Expect = 2.8
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 16/154 (10%)
Query: 1891 RRPERRHSDP-WGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRR 1949
R ERR D R+D + DR +G ++ +R EKEW + R
Sbjct: 872 REEERRLGDSSLSRKDSRWGDRD---SEGTWRKGPEADSEWRRGPPEKEWRRGEGRD--E 926
Query: 1950 DRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDKE 2009
DRS +D +R R +D+E + DR + D R + P++ + D +
Sbjct: 927 DRSHRRDEERPRRLGDDEDREPSLRPDDDR-VPRRGMDDDRGPRRGPEEDRFSRRGADDD 985
Query: 2010 R--------EKSKHREGEKDRDRY-HKDRDHTDR 2034
R ++ R ++DR + H D D R
Sbjct: 986 RPSWRNTDDDRPPRRIADEDRGNWRHADDDRPPR 1019
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 63.2 bits (152), Expect = 3e-09
Identities = 45/156 (28%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQES----ERH 1946
R+ ERR + R+ +++ +R RGK ++++ +RER KE E++ E+
Sbjct: 36 RKKERREREK--RKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKE 93
Query: 1947 RRRDRSQDKDRDRK--SREEGHKDKER-ARLSHGDRGTDGKASRDSRNVDKKPDKPKSED 2003
RR+ + + K R+RK R E K KER R + + K + + +K K + E
Sbjct: 94 RRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKER 153
Query: 2004 YEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+++++R+K K E EK R+R K+R K +R
Sbjct: 154 GKRERKRKKRKKEEREKKRERNRKERKKERERKERR 189
Score = 59.3 bits (142), Expect = 4e-08
Identities = 34/140 (24%), Positives = 75/140 (53%), Gaps = 15/140 (10%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHR 1947
++ +R ERR + R+ +++ RG+ +R++ K+ER E+E E + R R
Sbjct: 82 REKQRKERREKERRKRKKEKKKRERKQRGRRERKK--------KKERKERERENKQRRER 133
Query: 1948 RRDRSQDKDR---DRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDY 2004
+R + + K R ++ +E G ++++R + +R + R+ ++K ++ + E
Sbjct: 134 KRKKRRKKKRRKERKREKERGKRERKRKKRKKEER----EKKRERNRKERKKERERKERR 189
Query: 2005 EKDKEREKSKHREGEKDRDR 2024
E+ KER+K + ++ E+ +DR
Sbjct: 190 ERKKERKKERRKKKERKKDR 209
Score = 57.4 bits (137), Expect = 1e-07
Identities = 31/115 (26%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 1929 HLKRERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD 1988
H+ + ++E E++ ER R R ++++++RK RE G K+K++ + +RG + + R
Sbjct: 24 HISKPCTQRESERKKERREREKRKREREKERK-RERGKKEKKKRK--KRERGKERERKRK 80
Query: 1989 SRNVDKK----PDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
R +K ++ K + +K +ER++ RE +K ++R ++R++ R + KR
Sbjct: 81 EREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKR 135
Score = 55.5 bits (132), Expect = 5e-07
Identities = 36/153 (23%), Positives = 74/153 (48%), Gaps = 2/153 (1%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESER-H 1946
K R+ R + ++ +++ R R K R+R +++R +E +++ ER
Sbjct: 63 KKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKE 122
Query: 1947 RRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEK 2006
R R+ Q ++R RK R + + KER R + + R +KK ++ + E +K
Sbjct: 123 RERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKE-RKK 181
Query: 2007 DKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
++ER++ + R+ E+ ++R K DR ++
Sbjct: 182 ERERKERRERKKERKKERRKKKERKKDRKTDRQ 214
Score = 53.1 bits (126), Expect = 3e-06
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 1898 SDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQD-KD 1956
S P +++ ++ R K R+R KRER +KE ++ +R R ++R + K+
Sbjct: 26 SKPCTQRESERKKERREREKRKRER----EKERKRERGKKEKKKRKKRERGKERERKRKE 81
Query: 1957 RDRKSREEGHKD--------KERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEKDK 2008
R+++ +E K+ K+R R G R K R R + K + + + K
Sbjct: 82 REKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKK 141
Query: 2009 EREKSKHREGEK-DRDRYHKDRDHTDRTKSK 2038
+R K + RE E+ R+R K R +R K +
Sbjct: 142 KRRKERKREKERGKRERKRKKRKKEEREKKR 172
Score = 51.6 bits (122), Expect = 8e-06
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFY--SDSHHLKRERHEKEWEQESERHRR 1948
+R ER+ ++ +++ R RGK +R+R + KRER+ KE ++E ER R
Sbjct: 129 QRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKER 188
Query: 1949 RDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSR 1990
R+R +++ ++R+ ++E KD++ DR TD + R R
Sbjct: 189 RERKKERKKERRKKKERKKDRKT------DRQTDSQVFRPLR 224
Score = 43.5 bits (101), Expect = 0.002
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 5/102 (4%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
++ ER+ + +Q +++ R R K R+ + KRER K+ ++E ER ++R+
Sbjct: 116 KKKERKERERENKQRRER-KRKKRRKKKRRKERKREKERGKRERKRKKRKKE-EREKKRE 173
Query: 1951 RS---QDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDS 1989
R+ + K+R+RK R E K++++ R +R D K R +
Sbjct: 174 RNRKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQT 215
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 62.8 bits (151), Expect = 3e-09
Identities = 28/107 (26%), Positives = 58/107 (54%)
Query: 1933 ERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNV 1992
ER +KE ++ ER + R+R +++ ++ REE ++KERAR + + ++ SR
Sbjct: 245 ERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTS 304
Query: 1993 DKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
D++ + + + +ER +S+ R+ + R +R H R++ +R
Sbjct: 305 DRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRR 351
Score = 55.1 bits (131), Expect = 7e-07
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 1887 VKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERH 1946
V++++ R+ ++ R ++ + ++ R + +++R + +RER + E+E E+
Sbjct: 227 VEELKEKLRKRTEEPDRDERLKKEKQ-EREEREKER---EREREERERKRRREEEEREKE 282
Query: 1947 RRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEK 2006
R RDR + K +SR R S + + + R SR+ D++ + +S D +
Sbjct: 283 RARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRR--RSRSHDRSE 340
Query: 2007 DKEREKSKHREGEKDRDR-----YHKDRDHTDRTKSK 2038
K R +S+ R K RDR K RD KSK
Sbjct: 341 RKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSK 377
Score = 55.1 bits (131), Expect = 7e-07
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESER-- 1945
K P+R +Q++++ ++ R + +R+R KR R E+E E+E R
Sbjct: 236 KRTEEPDRDERLKKEKQEREEREKEREREREERER--------KRRREEEEREKERARDR 287
Query: 1946 -HRRRDRSQDKDRDRK-----SREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKP 1999
R+R RS+ + R SR HK + R+R R D + SR S + ++ +
Sbjct: 288 ERRKRSRSRSRHSSRTSDRRCSRSRDHK-RSRSRERRRSRSRDRRRSR-SHDRSERKHRS 345
Query: 2000 KSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+S D + K R++ ++ K RDR ++D + K KR
Sbjct: 346 RSRDRRRSKSRDRKSYKHRSKSRDR---EQDRKSKEKEKR 382
Score = 51.2 bits (121), Expect = 1e-05
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRE-----RHEKEWEQESER 1945
R ER + R+++++ ++ R + R+R S S H R ++ ++ R
Sbjct: 261 REREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSR 320
Query: 1946 HRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD-SRNVDKKPDKPKSEDY 2004
RRR RS+D+ R R K + R+R + D K+ + S++ D++ D+ E
Sbjct: 321 ERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380
Query: 2005 EKDKEREKSKHREGEKDR 2022
++ + +KS + G +++
Sbjct: 381 KRGSDDKKSSVKSGSREK 398
Score = 44.3 bits (103), Expect = 0.001
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 16/143 (11%)
Query: 1892 RPERRHSDPWGRQDQQQLDRPFNRGKG-----DRQRFYSDSHHLKRERHEKEWEQESERH 1946
R R+ S R + DR +R + R+R S S +R R E++ R
Sbjct: 287 RERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERK-HRS 345
Query: 1947 RRRDRSQDKDRDRKS---------REEGHKDKERARLSHGDRGTDGKA-SRDSRNVDKKP 1996
R RDR + K RDRKS RE+ K KE+ + D+ + K+ SR+ ++ D
Sbjct: 346 RSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNT 405
Query: 1997 DKPKSEDYEKDKEREKSKHREGE 2019
+ +S+ + + EG+
Sbjct: 406 ESKESDTKNEVNGTSEDIKSEGD 428
Score = 33.5 bits (75), Expect = 2.2
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
R + + S R+ + DR +R +R + +R ++ + R + RD
Sbjct: 310 RSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRD 369
Query: 1951 RSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPK-----SEDYE 2005
R Q DR K +E+ D +++ + G R K S D+ K+ D SED +
Sbjct: 370 REQ--DRKSKEKEKRGSDDKKSSVKSGSR---EKQSEDTNTESKESDTKNEVNGTSEDIK 424
Query: 2006 KDKEREKS 2013
+ + + +
Sbjct: 425 SEGDTQSN 432
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 62.8 bits (151), Expect = 3e-09
Identities = 28/107 (26%), Positives = 58/107 (54%)
Query: 1933 ERHEKEWEQESERHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNV 1992
ER +KE ++ ER + R+R +++ ++ REE ++KERAR + + ++ SR
Sbjct: 245 ERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTS 304
Query: 1993 DKKPDKPKSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
D++ + + + +ER +S+ R+ + R +R H R++ +R
Sbjct: 305 DRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRR 351
Score = 55.1 bits (131), Expect = 7e-07
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
Query: 1887 VKDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERH 1946
V++++ R+ ++ R ++ + ++ R + +++R + +RER + E+E E+
Sbjct: 227 VEELKEKLRKRTEEPDRDERLKKEKQ-EREEREKER---EREREERERKRRREEEEREKE 282
Query: 1947 RRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYEK 2006
R RDR + K +SR R S + + + R SR+ D++ + +S D +
Sbjct: 283 RARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRR--RSRSHDRSE 340
Query: 2007 DKEREKSKHREGEKDRDR-----YHKDRDHTDRTKSK 2038
K R +S+ R K RDR K RD KSK
Sbjct: 341 RKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSK 377
Score = 55.1 bits (131), Expect = 7e-07
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 21/160 (13%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESER-- 1945
K P+R +Q++++ ++ R + +R+R KR R E+E E+E R
Sbjct: 236 KRTEEPDRDERLKKEKQEREEREKEREREREERER--------KRRREEEEREKERARDR 287
Query: 1946 -HRRRDRSQDKDRDRK-----SREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKP 1999
R+R RS+ + R SR HK + R+R R D + SR S + ++ +
Sbjct: 288 ERRKRSRSRSRHSSRTSDRRCSRSRDHK-RSRSRERRRSRSRDRRRSR-SHDRSERKHRS 345
Query: 2000 KSEDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
+S D + K R++ ++ K RDR ++D + K KR
Sbjct: 346 RSRDRRRSKSRDRKSYKHRSKSRDR---EQDRKSKEKEKR 382
Score = 51.2 bits (121), Expect = 1e-05
Identities = 32/138 (23%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRE-----RHEKEWEQESER 1945
R ER + R+++++ ++ R + R+R S S H R ++ ++ R
Sbjct: 261 REREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSR 320
Query: 1946 HRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRD-SRNVDKKPDKPKSEDY 2004
RRR RS+D+ R R K + R+R + D K+ + S++ D++ D+ E
Sbjct: 321 ERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKE 380
Query: 2005 EKDKEREKSKHREGEKDR 2022
++ + +KS + G +++
Sbjct: 381 KRGSDDKKSSVKSGSREK 398
Score = 44.3 bits (103), Expect = 0.001
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 16/143 (11%)
Query: 1892 RPERRHSDPWGRQDQQQLDRPFNRGKG-----DRQRFYSDSHHLKRERHEKEWEQESERH 1946
R R+ S R + DR +R + R+R S S +R R E++ R
Sbjct: 287 RERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERK-HRS 345
Query: 1947 RRRDRSQDKDRDRKS---------REEGHKDKERARLSHGDRGTDGKA-SRDSRNVDKKP 1996
R RDR + K RDRKS RE+ K KE+ + D+ + K+ SR+ ++ D
Sbjct: 346 RSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNT 405
Query: 1997 DKPKSEDYEKDKEREKSKHREGE 2019
+ +S+ + + EG+
Sbjct: 406 ESKESDTKNEVNGTSEDIKSEGD 428
Score = 33.5 bits (75), Expect = 2.2
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRD 1950
R + + S R+ + DR +R +R + +R ++ + R + RD
Sbjct: 310 RSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRD 369
Query: 1951 RSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPK-----SEDYE 2005
R Q DR K +E+ D +++ + G R K S D+ K+ D SED +
Sbjct: 370 REQ--DRKSKEKEKRGSDDKKSSVKSGSR---EKQSEDTNTESKESDTKNEVNGTSEDIK 424
Query: 2006 KDKEREKS 2013
+ + + +
Sbjct: 425 SEGDTQSN 432
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 62.4 bits (150), Expect = 4e-09
Identities = 43/159 (27%), Positives = 84/159 (52%), Gaps = 12/159 (7%)
Query: 1889 DIRRPERR-HSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWE---QESE 1944
+IR ER + G+++++ + R + R+R +R + EK+ E +E E
Sbjct: 37 EIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERE 96
Query: 1945 RHRRRDRSQDKDRDRKSREEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDY 2004
R +RR ++K+ + K + + + KER R S G + + + + ++K + K E+
Sbjct: 97 RKKRRREKENKEGEEKEKRKKKEKKERGRTS--KEGKERERKEERKREERKERERKKEER 154
Query: 2005 EKDKEREKSKHRE----GEKDRDRYHKDRDHTDRTKSKR 2039
EK++ER++ K RE GEK+ +R K+++ +R K +R
Sbjct: 155 EKERERKERKKRERKQVGEKEEER--KEKERKERKKRER 191
Score = 60.1 bits (144), Expect = 2e-08
Identities = 43/158 (27%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 1891 RRPERRHSDPWGRQDQQQLDRPFNRGK----GDRQRFYSDSHHLKRERHEKEWEQESERH 1946
R+ ERR + R+ +++ +R RGK G+R++ + K+ R EKE +E E
Sbjct: 59 RKKERREREK--RKREREKERKRERGKKEKKGERKK---EERERKKRRREKE-NKEGEEK 112
Query: 1947 RRRDRSQDKDRDRKSRE--EGHKDKERARLSHGDR---GTDGKASRDSRNVDKKPDKPKS 2001
+R + + K+R R S+E E + +ER R +R + + R+ + K+ K
Sbjct: 113 EKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVG 172
Query: 2002 EDYEKDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
E E+ KE+E+ + ++ E++R K+R+ +R + K+
Sbjct: 173 EKEEERKEKERKERKKRERNRKERKKERERKERRERKK 210
Score = 59.3 bits (142), Expect = 4e-08
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 1898 SDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHRRRDRSQDK-- 1955
+ P + + ++ +R K ++ S+ +RER +++ E+E ER R R + + K
Sbjct: 30 TQPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGE 89
Query: 1956 ----DRDRKSR------EEGHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKSEDYE 2005
+R+RK R +EG + ++R + +RG K ++ +++ + + E
Sbjct: 90 RKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERER 149
Query: 2006 KDKEREKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
K +EREK + R+ K R+R +R + +R
Sbjct: 150 KKEEREKERERKERKKRERKQVGEKEEERKEKER 183
Score = 54.3 bits (129), Expect = 1e-06
Identities = 36/162 (22%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 1888 KDIRRPERRHSDPWGRQDQQQLDRPFNRGKGDRQRFYSDSHHLKRERHEKEWEQESERHR 1947
K+ R ++R + ++ +++ R + K ++R + +RER E+ +E +
Sbjct: 92 KEERERKKRRREKENKEGEEKEKR---KKKEKKERGRTSKEGKERERKEERKREERKERE 148
Query: 1948 RRDRSQDKDRDRKSREE------GHKDKERARLSHGDRGTDGKASRDSRNVDKKPDKPKS 2001
R+ ++K+R+RK R++ G K++ER +R R+ ++K ++ +
Sbjct: 149 RKKEEREKERERKERKKRERKQVGEKEEERKEKERKER-----KKRERNRKERKKERERK 203
Query: 2002 EDYEKDKER----EKSKHREGEKDRDRYHKDRDHTDRTKSKR 2039
E E+ KER E+ K R+ ++ + K+R +R + K+
Sbjct: 204 ERRERKKERKKKEERKKERQKDRQTNWREKERGKRERKERKK 245
Score = 32.7 bits (73), Expect = 3.7
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 1027 RRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDAPMKEQEAAMEIQEPAANKSLE 1086
+ RE+ E E+E+R+ ER K +G+ E + + +E+E +E + E
Sbjct: 53 KERESERKKERREREKRKREREKERK-RERGKKEKKGERKKEERERKKRRREKENKEGEE 111
Query: 1087 KPEGSEKQKEEVDSMSKDTTSQHRQ 1111
K + +K+K+E SK+ + R+
Sbjct: 112 KEKRKKKEKKERGRTSKEGKERERK 136
>gi|38505156 transcription elongation factor A protein 2 isoform b
[Homo sapiens]
Length = 272
Score = 62.0 bits (149), Expect = 6e-09
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 930 SVRHSLKDILMKRL-TDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNL 988
+VR+ +++L L TD + +++ +IE+ +F +TD KYKN+ RS + NL
Sbjct: 110 AVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNL 169
Query: 989 KDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTI 1035
KD KN L + VL G +TP + M+ EE+AS EL R+ + I
Sbjct: 170 KDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAI 216
>gi|4507385 transcription elongation factor A protein 2 isoform a
[Homo sapiens]
Length = 299
Score = 62.0 bits (149), Expect = 6e-09
Identities = 38/107 (35%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 930 SVRHSLKDILMKRL-TDSNLKVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSLMFNL 988
+VR+ +++L L TD + +++ +IE+ +F +TD KYKN+ RS + NL
Sbjct: 137 AVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNL 196
Query: 989 KDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTI 1035
KD KN L + VL G +TP + M+ EE+AS EL R+ + I
Sbjct: 197 KDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAI 243
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.127 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,393,349
Number of Sequences: 37866
Number of extensions: 4533125
Number of successful extensions: 32919
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 878
Number of HSP's that attempted gapping in prelim test: 19704
Number of HSP's gapped (non-prelim): 8766
length of query: 2039
length of database: 18,247,518
effective HSP length: 118
effective length of query: 1921
effective length of database: 13,779,330
effective search space: 26470092930
effective search space used: 26470092930
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.