Guide to the Human Genome
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Name: LOC100131202 Sequence: fasta or formatted (202aa) NCBI GI: 239747891
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {290aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.5          1           1
 C cysteine            0.0          0           0
 D aspartate           7.4         15           1
 E glutamate          23.3         47           2
 F phenylalanine       0.0          0           0
 G glycine             2.5          5           2
 H histidine           1.0          2           1
 I isoleucine          0.5          1           1
 K lysine             11.9         24           3
 L leucine             0.0          0           0
 M methionine          0.5          1           1
 N asparagine          2.0          4           1
 P proline             0.5          1           1
 Q glutamine           8.9         18           1
 R arginine           34.7         70           2
 S serine              0.5          1           1
 T threonine           5.0         10           1
 V valine              0.0          0           0
 W tryptophan          1.0          2           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100131202          0.542   PREDICTED: hypothetical protein 
LOC100286959          0.471   PREDICTED: hypothetical protein XP_002343921 
LOC100288837          0.430   PREDICTED: hypothetical protein XP_002343931, parti...
RBM25                 0.406   RNA binding motif protein 25 
ZC3H13                0.404   zinc finger CCCH-type containing 13 
LOC100134067          0.378   PREDICTED: hypothetical protein 
LOC100133599          0.320   PREDICTED: hypothetical protein 
LOC100133599          0.312   PREDICTED: hypothetical protein 
SFRS12                0.299   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.299   splicing factor, arginine/serine-rich 12 isoform b [...
PRPF38B               0.271   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
TCHH                  0.263   trichohyalin 
CROP                  0.250   cisplatin resistance-associated overexpressed protei...
CROP                  0.250   cisplatin resistance-associated overexpressed protei...
RSRC2                 0.224   arginine/serine-rich coiled-coil 2 isoform a 
DIDO1                 0.221   death inducer-obliterator 1 isoform c 
BAT2D1                0.216   HBxAg transactivated protein 2 
RSRC2                 0.214   arginine/serine-rich coiled-coil 2 isoform b 
ACIN1                 0.206   apoptotic chromatin condensation inducer 1 
SNRNP70               0.206   U1 small nuclear ribonucleoprotein 70 kDa 
TRAF3IP1              0.203   TNF receptor-associated factor 3 interacting protei...
TRAF3IP1              0.203   TNF receptor-associated factor 3 interacting protein...
DDX46                 0.201   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
LOC727832             0.195   golgi autoantigen, golgin subfamily a-like 
LOC100170229          0.195   hypothetical protein LOC100170229 
LOC283685             0.195   PREDICTED: golgi autoantigen, golgin subfamily a-li...
PPIG                  0.195   peptidylprolyl isomerase G 
LOC283685             0.190   PREDICTED: golgi autoantigen, golgin subfamily a-li...
ZC3H18                0.188   zinc finger CCCH-type containing 18 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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