RNASEN 5760

Name: RNASEN	Sequence: fasta or formatted (1337aa)		NCBI GI: 155030236
Description: ribonuclease III, nuclear isoform 2		Referenced in: MicroRNAs RNases and RNA Stability
Other entries for this name: alt prot [1374aa] ribonuclease III, nuclear isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 60 2 C cysteine 2.0 27 2 D aspartate 5.1 68 2 E glutamate 7.9 105 6 F phenylalanine 4.6 62 2 G glycine 4.7 63 2 H histidine 4.6 61 2 I isoleucine 3.7 50 2 K lysine 5.2 69 2 L leucine 8.9 119 2 M methionine 3.1 42 2 N asparagine 4.1 55 2 P proline 9.8 131 5 Q glutamine 4.5 60 2 R arginine 8.3 111 3 S serine 6.7 89 4 T threonine 4.3 57 2 V valine 3.7 49 2 W tryptophan 1.0 13 1 Y tyrosine 3.4 46 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ribonuclease III, nuclear isoform 2 RNASEN 0.992 ribonuclease III, nuclear isoform 1 FIP1L1 0.024 FIP1 like 1 isoform 2 CPSF6 0.023 cleavage and polyadenylation specific factor 6, 68 ... FIP1L1 0.022 FIP1 like 1 isoform 3 FIP1L1 0.022 FIP1 like 1 isoform 1 CHERP 0.022 calcium homeostasis endoplasmic reticulum protein [... WIPF3 0.021 WAS/WASL interacting protein family, member 3 [Homo... ESX1 0.019 extraembryonic, spermatogenesis, homeobox 1-like [Ho... CROP 0.019 cisplatin resistance-associated overexpressed protei... CROP 0.019 cisplatin resistance-associated overexpressed protei... FMN2 0.019 formin 2 SFRS15 0.019 splicing factor, arginine/serine-rich 15 isoform 3 ... SFRS15 0.019 splicing factor, arginine/serine-rich 15 isoform 2 ... SFRS15 0.019 splicing factor, arginine/serine-rich 15 isoform 1 [... WASF2 0.019 WAS protein family, member 2 RAPH1 0.019 Ras association and pleckstrin homology domains 1 is... DDX46 0.018 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 FLJ22184 0.018 PREDICTED: hypothetical protein FLJ22184 LOC100286959 0.018 PREDICTED: hypothetical protein XP_002343921 RBM25 0.018 RNA binding motif protein 25 RBBP6 0.018 retinoblastoma-binding protein 6 isoform 2 WASF1 0.018 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.018 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.018 Wiskott-Aldrich syndrome protein family member 1 [Ho... WASF1 0.018 Wiskott-Aldrich syndrome protein family member 1 [Hom... SF1 0.018 splicing factor 1 isoform 1 SF3B4 0.017 splicing factor 3b, subunit 4 LOC100131202 0.017 PREDICTED: hypothetical protein WIPF1 0.017 WAS/WASL interacting protein family, member 1 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.