Guide to the Human Genome
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Name: CROP Sequence: fasta or formatted (432aa) NCBI GI: 19923485
Description:

cisplatin resistance-associated overexpressed protein

Referenced in:

Xenobiotic Pathways

Other entries for this name:
alt mRNA [432aa] cisplatin resistance-associated overexpressed protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9         17           2
 C cysteine            1.6          7           1
 D aspartate           6.7         29           2
 E glutamate          14.1         61           4
 F phenylalanine       1.4          6           1
 G glycine             4.4         19           1
 H histidine           2.3         10           1
 I isoleucine          2.3         10           1
 K lysine             10.0         43           2
 L leucine             6.2         27           2
 M methionine          1.9          8           2
 N asparagine          2.3         10           1
 P proline             1.2          5           1
 Q glutamine           4.4         19           2
 R arginine           17.1         74           3
 S serine             11.3         49           2
 T threonine           3.5         15           2
 V valine              3.5         15           1
 W tryptophan          0.2          1           1
 Y tyrosine            1.6          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cisplatin resistance-associated overexpressed protei... 
CROP                  1.000   cisplatin resistance-associated overexpressed protei...
LUC7L2                0.262   LUC7-like 2 
LUC7L                 0.227   LUC7-like isoform b 
LUC7L                 0.217   LUC7-like isoform a 
RBM25                 0.133   RNA binding motif protein 25 
LOC100286959          0.121   PREDICTED: hypothetical protein XP_002343921 
LOC100131202          0.117   PREDICTED: hypothetical protein 
LOC100133599          0.113   PREDICTED: hypothetical protein 
ZC3H13                0.113   zinc finger CCCH-type containing 13 
LOC100131202          0.112   PREDICTED: hypothetical protein 
SFRS12                0.106   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.106   splicing factor, arginine/serine-rich 12 isoform b [...
PRPF38B               0.103   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
LOC100133599          0.102   PREDICTED: hypothetical protein 
DDX46                 0.101   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
LOC100288837          0.100   PREDICTED: hypothetical protein XP_002343931, parti...
RSRC2                 0.100   arginine/serine-rich coiled-coil 2 isoform a 
PPIG                  0.096   peptidylprolyl isomerase G 
RSRC2                 0.095   arginine/serine-rich coiled-coil 2 isoform b 
LOC100134067          0.093   PREDICTED: hypothetical protein 
SFRS11                0.093   splicing factor, arginine/serine-rich 11 
SFRS4                 0.092   splicing factor, arginine/serine-rich 4 
ZRANB2                0.087   zinc finger protein 265 isoform 1 
SNRNP70               0.086   U1 small nuclear ribonucleoprotein 70 kDa 
ZRANB2                0.085   zinc finger protein 265 isoform 2 
LOC100170229          0.084   hypothetical protein LOC100170229 
TCHH                  0.081   trichohyalin 
SON                   0.080   SON DNA-binding protein isoform F 
SON                   0.080   SON DNA-binding protein isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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