EDEM1 35872

Name: EDEM1	Sequence: fasta or formatted (657aa)		NCBI GI: 7662002
Description: ER degradation enhancer, mannosidase alpha-like 1		Referenced in: Protein Glycosylation
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 36 2 C cysteine 1.2 8 1 D aspartate 5.5 36 1 E glutamate 5.2 34 2 F phenylalanine 4.7 31 2 G glycine 9.6 63 2 H histidine 2.3 15 2 I isoleucine 3.7 24 2 K lysine 4.0 26 1 L leucine 11.6 76 2 M methionine 2.6 17 1 N asparagine 4.6 30 2 P proline 6.4 42 2 Q glutamine 4.0 26 1 R arginine 6.1 40 2 S serine 6.4 42 3 T threonine 4.3 28 2 V valine 6.2 41 2 W tryptophan 1.7 11 1 Y tyrosine 4.7 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ER degradation enhancer, mannosidase alpha-like 1 [Ho... EDEM3 0.269 ER degradation enhancer, mannosidase alpha-like 3 [... EDEM2 0.248 ER degradation enhancer, mannosidase alpha-like 2 i... EDEM2 0.227 ER degradation enhancer, mannosidase alpha-like 2 i... MAN1B1 0.122 alpha 1,2-mannosidase MAN1A2 0.113 mannosidase, alpha, class 1A, member 2 MAN1A1 0.104 mannosidase, alpha, class 1A, member 1 MAN1C1 0.099 mannosidase, alpha, class 1C, member 1 PPP1R10 0.015 protein phosphatase 1, regulatory subunit 10 COL2A1 0.011 collagen, type II, alpha 1 isoform 1 precursor [Hom... COL2A1 0.011 collagen, type II, alpha 1 isoform 2 precursor [Hom... COL9A3 0.010 alpha 3 type IX collagen COL15A1 0.009 alpha 1 type XV collagen precursor LOC100290372 0.009 PREDICTED: hypothetical protein XP_002346788 LOC100288606 0.009 PREDICTED: hypothetical protein XP_002342652 COL5A1 0.009 alpha 1 type V collagen preproprotein COL7A1 0.009 alpha 1 type VII collagen precursor COL1A1 0.008 alpha 1 type I collagen preproprotein COL3A1 0.008 collagen type III alpha 1 preproprotein COL1A2 0.008 alpha 2 type I collagen COL11A2 0.008 collagen, type XI, alpha 2 isoform 2 preproprotein ... COL11A2 0.008 collagen, type XI, alpha 2 isoform 3 preproprotein ... COL11A2 0.008 collagen, type XI, alpha 2 isoform 1 preproprotein ... COL8A2 0.008 collagen, type VIII, alpha 2 OGFR 0.008 opioid growth factor receptor EMID2 0.008 EMI domain containing 2 LOC100127891 0.007 PREDICTED: hypothetical protein COL10A1 0.007 type X collagen alpha 1 precursor SEC24C 0.007 SEC24-related protein C SEC24C 0.007 SEC24-related protein C Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.