BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|7657025 dickkopf homolog 4 precursor [Homo sapiens] (224 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|7657025 dickkopf homolog 4 precursor [Homo sapiens] 481 e-136 gi|7657023 dickkopf homolog 2 precursor [Homo sapiens] 154 4e-38 gi|7110719 dickkopf homolog 1 precursor [Homo sapiens] 146 2e-35 gi|66346689 dickkopf homolog 3 precursor [Homo sapiens] 72 4e-13 gi|40548393 dickkopf homolog 3 precursor [Homo sapiens] 72 4e-13 gi|40548389 dickkopf homolog 3 precursor [Homo sapiens] 72 4e-13 gi|14165282 prokineticin 1 [Homo sapiens] 45 5e-05 gi|17530787 prokineticin 2 isoform b precursor [Homo sapiens] 41 0.001 gi|187167261 prokineticin 2 isoform a precursor [Homo sapiens] 36 0.030 gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens] 35 0.040 gi|18252045 ADAM metallopeptidase domain 33 isoform alpha prepro... 35 0.068 gi|11968150 GDNF-inducible zinc finger protein 1 [Homo sapiens] 33 0.26 gi|24041040 ADAM metallopeptidase domain 33 isoform beta preprop... 32 0.34 gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1... 32 0.44 gi|122937343 platelet endothelial aggregation receptor 1 [Homo s... 32 0.57 gi|21464119 methyl-CpG binding domain protein 1 isoform PCM1 [Ho... 31 0.98 gi|225690551 keratin associated protein 4-9 [Homo sapiens] 30 1.3 gi|154759249 keratin associated protein 10-11 [Homo sapiens] 30 1.7 gi|183396797 keratin associated protein KRTAP2.1A [Homo sapiens] 30 2.2 gi|15082232 keratin associated protein 2-4 [Homo sapiens] 30 2.2 gi|225690576 keratin associated protein 2-2 [Homo sapiens] 30 2.2 gi|113427417 PREDICTED: similar to keratin associated protein 2-... 30 2.2 gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 30 2.2 gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... 30 2.2 gi|118572608 keratin associated protein 4-5 [Homo sapiens] 30 2.2 gi|22547108 tumor necrosis factor receptor superfamily, member 1... 29 2.8 gi|21464115 methyl-CpG binding domain protein 1 isoform 2 [Homo ... 29 2.8 gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo ... 29 2.8 gi|30089980 chordin [Homo sapiens] 29 3.7 gi|56699495 WAP four-disulfide core domain 2 precursor [Homo sap... 29 3.7 >gi|7657025 dickkopf homolog 4 precursor [Homo sapiens] Length = 224 Score = 481 bits (1238), Expect = e-136 Identities = 224/224 (100%), Positives = 224/224 (100%) Query: 1 MVAAVLLGLSWLCSPLGALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEK 60 MVAAVLLGLSWLCSPLGALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEK Sbjct: 1 MVAAVLLGLSWLCSPLGALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEK 60 Query: 61 PFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTMEDATPILERQLDEQDGTHAEGTTGHPV 120 PFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTMEDATPILERQLDEQDGTHAEGTTGHPV Sbjct: 61 PFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTMEDATPILERQLDEQDGTHAEGTTGHPV 120 Query: 121 QENQPKRKPSIKKSQGRKGQEGESCLRTFDCGPGLCCARHFWTKICKPVLLEGQVCSRRG 180 QENQPKRKPSIKKSQGRKGQEGESCLRTFDCGPGLCCARHFWTKICKPVLLEGQVCSRRG Sbjct: 121 QENQPKRKPSIKKSQGRKGQEGESCLRTFDCGPGLCCARHFWTKICKPVLLEGQVCSRRG 180 Query: 181 HKDTAQAPEIFQRCDCGPGLLCRSQLTSNRQHARLRVCQKIEKL 224 HKDTAQAPEIFQRCDCGPGLLCRSQLTSNRQHARLRVCQKIEKL Sbjct: 181 HKDTAQAPEIFQRCDCGPGLLCRSQLTSNRQHARLRVCQKIEKL 224 >gi|7657023 dickkopf homolog 2 precursor [Homo sapiens] Length = 259 Score = 154 bits (390), Expect = 4e-38 Identities = 84/199 (42%), Positives = 110/199 (55%), Gaps = 15/199 (7%) Query: 34 GARKGSQ------CLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVN 87 G++KG C SD +C ++C P C CR ++RC RD MCCP T C N Sbjct: 65 GSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPSTRCNN 124 Query: 88 DVCTTMEDATPILERQLDEQDGT-HAEGTTGHPVQEN---QPKRKPSIKKSQGRKGQEGE 143 +C + ++ IL + DGT H + GH + Q +P K S KG EG+ Sbjct: 125 GICIPVTES--ILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSH-IKGHEGD 181 Query: 144 SCLRTFDCGPGLCCARHFWTKICKPVLLEGQVCSRRGHKDTAQAPEIFQRCDCGPGLLCR 203 CLR+ DC G CCARHFWTKICKPVL +G+VC+++ K + EIFQRCDC GL C+ Sbjct: 182 PCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQ-RKKGSHGLEIFQRCDCAKGLSCK 240 Query: 204 S-QLTSNRQHARLRVCQKI 221 + + ARL VCQKI Sbjct: 241 VWKDATYSSKARLHVCQKI 259 >gi|7110719 dickkopf homolog 1 precursor [Homo sapiens] Length = 266 Score = 146 bits (368), Expect = 2e-35 Identities = 77/188 (40%), Positives = 97/188 (51%), Gaps = 15/188 (7%) Query: 41 CLSDTDCNTRKFCLQPRDEKP----FCATCRGLRRRCQRDAMCCPGTLCVNDVCTTMEDA 96 C D +C T ++C P C CR R+RC R AMCCPG C N +C + + Sbjct: 85 CAEDEECGTDEYCASPTRGGDAGVQICLACRKRRKRCMRHAMCCPGNYCKNGICVSSDQN 144 Query: 97 --TPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLRTFDCGPG 154 +E + E G H + +R K KGQEG CLR+ DC G Sbjct: 145 HFRGEIEETITESFGND------HSTLDGYSRRTTLSSKMYHTKGQEGSVCLRSSDCASG 198 Query: 155 LCCARHFWTKICKPVLLEGQVCSRRGHKDTAQAPEIFQRCDCGPGLLCRSQLTSNR--QH 212 LCCARHFW+KICKPVL EGQVC++ K + EIFQRC CG GL CR Q ++ Sbjct: 199 LCCARHFWSKICKPVLKEGQVCTKHRRKG-SHGLEIFQRCYCGEGLSCRIQKDHHQASNS 257 Query: 213 ARLRVCQK 220 +RL CQ+ Sbjct: 258 SRLHTCQR 265 >gi|66346689 dickkopf homolog 3 precursor [Homo sapiens] Length = 350 Score = 72.0 bits (175), Expect = 4e-13 Identities = 57/215 (26%), Positives = 78/215 (36%), Gaps = 65/215 (30%) Query: 17 GALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRD 76 G +V I S D G R+ +C+ D DC +C Q + C CRG R C RD Sbjct: 124 GQMVFSETVITSVGDEEG-RRSHECIIDEDCGPSMYC-QFASFQYTCQPCRGQRMLCTRD 181 Query: 77 AMCCPGTLCVNDVCTTMEDATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQG 136 + CC LCV CT M Sbjct: 182 SECCGDQLCVWGHCTKM------------------------------------------A 199 Query: 137 RKGQEGESCLRTFDCGPGLCCA--RHFWTKICKPVLLEGQVCSRRGHKDTAQAPEI---- 190 +G G C DC PGLCCA R +C P+ +EG++C H ++ ++ Sbjct: 200 TRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELC----HDPASRLLDLITWE 255 Query: 191 ------FQRCDCGPGLLCRSQLTSNRQHARLRVCQ 219 RC C GLLC+ H+ + VC+ Sbjct: 256 LEPDGALDRCPCASGLLCQP-----HSHSLVYVCK 285 >gi|40548393 dickkopf homolog 3 precursor [Homo sapiens] Length = 350 Score = 72.0 bits (175), Expect = 4e-13 Identities = 57/215 (26%), Positives = 78/215 (36%), Gaps = 65/215 (30%) Query: 17 GALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRD 76 G +V I S D G R+ +C+ D DC +C Q + C CRG R C RD Sbjct: 124 GQMVFSETVITSVGDEEG-RRSHECIIDEDCGPSMYC-QFASFQYTCQPCRGQRMLCTRD 181 Query: 77 AMCCPGTLCVNDVCTTMEDATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQG 136 + CC LCV CT M Sbjct: 182 SECCGDQLCVWGHCTKM------------------------------------------A 199 Query: 137 RKGQEGESCLRTFDCGPGLCCA--RHFWTKICKPVLLEGQVCSRRGHKDTAQAPEI---- 190 +G G C DC PGLCCA R +C P+ +EG++C H ++ ++ Sbjct: 200 TRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELC----HDPASRLLDLITWE 255 Query: 191 ------FQRCDCGPGLLCRSQLTSNRQHARLRVCQ 219 RC C GLLC+ H+ + VC+ Sbjct: 256 LEPDGALDRCPCASGLLCQP-----HSHSLVYVCK 285 >gi|40548389 dickkopf homolog 3 precursor [Homo sapiens] Length = 350 Score = 72.0 bits (175), Expect = 4e-13 Identities = 57/215 (26%), Positives = 78/215 (36%), Gaps = 65/215 (30%) Query: 17 GALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRD 76 G +V I S D G R+ +C+ D DC +C Q + C CRG R C RD Sbjct: 124 GQMVFSETVITSVGDEEG-RRSHECIIDEDCGPSMYC-QFASFQYTCQPCRGQRMLCTRD 181 Query: 77 AMCCPGTLCVNDVCTTMEDATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQG 136 + CC LCV CT M Sbjct: 182 SECCGDQLCVWGHCTKM------------------------------------------A 199 Query: 137 RKGQEGESCLRTFDCGPGLCCA--RHFWTKICKPVLLEGQVCSRRGHKDTAQAPEI---- 190 +G G C DC PGLCCA R +C P+ +EG++C H ++ ++ Sbjct: 200 TRGSNGTICDNQRDCQPGLCCAFQRGLLFPVCTPLPVEGELC----HDPASRLLDLITWE 255 Query: 191 ------FQRCDCGPGLLCRSQLTSNRQHARLRVCQ 219 RC C GLLC+ H+ + VC+ Sbjct: 256 LEPDGALDRCPCASGLLCQP-----HSHSLVYVCK 285 >gi|14165282 prokineticin 1 [Homo sapiens] Length = 105 Score = 45.1 bits (105), Expect = 5e-05 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 3/62 (4%) Query: 144 SCLRTFDCGPGLCCARHFW---TKICKPVLLEGQVCSRRGHKDTAQAPEIFQRCDCGPGL 200 +C R CG G CCA W ++C P+ EG+ C HK C C P L Sbjct: 25 ACERDVQCGAGTCCAISLWLRGLRMCTPLGREGEECHPGSHKVPFFRKRKHHTCPCLPNL 84 Query: 201 LC 202 LC Sbjct: 85 LC 86 >gi|17530787 prokineticin 2 isoform b precursor [Homo sapiens] Length = 108 Score = 40.8 bits (94), Expect = 0.001 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%) Query: 144 SCLRTFDCGPGLCCARHFWTK---ICKPVLLEGQVCSRRGHKDTAQAPEIFQRCDCGPGL 200 +C + CG G+CCA W K IC P+ G C K + C C PGL Sbjct: 33 ACDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKVPFFGRRMHHTCPCLPGL 92 Query: 201 LC 202 C Sbjct: 93 AC 94 >gi|187167261 prokineticin 2 isoform a precursor [Homo sapiens] Length = 129 Score = 35.8 bits (81), Expect = 0.030 Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 24/83 (28%) Query: 144 SCLRTFDCGPGLCCARHFWTK---ICKPVLLEGQVC--------------SRRGHKDTAQ 186 +C + CG G+CCA W K IC P+ G C RR K + + Sbjct: 33 ACDKDSQCGGGMCCAVSIWVKSIRICTPMGKLGDSCHPLTRKNNFGNGRQERRKRKRSKR 92 Query: 187 APEI-------FQRCDCGPGLLC 202 E+ C C PGL C Sbjct: 93 KKEVPFFGRRMHHTCPCLPGLAC 115 >gi|86990448 chromosome 1 open reading frame 187 [Homo sapiens] Length = 349 Score = 35.4 bits (80), Expect = 0.040 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 26/105 (24%) Query: 121 QENQPKRKPSIKKSQGRKGQ-----------EGESCLRTFDCGPGLCCARHFWTKICKPV 169 ++ +P PS KK + +G+ EGE C DC PG CC +C P Sbjct: 239 EDLKPDGWPSAKKKEKHRGKLSSDGNETSPAEGEPCDHHQDCLPGTCC--DLREHLCTP- 295 Query: 170 LLEGQVCSRRGHKDTAQAPEIFQRCDCGPGLLCRSQLTSNRQHAR 214 RG + + F C C GL C ++ NR+ R Sbjct: 296 -------HNRGLNN-----KCFDDCMCVEGLRCYAKFHRNRRVTR 328 Score = 29.3 bits (64), Expect = 2.8 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 8/45 (17%) Query: 41 CLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLC 85 CL T C+ R+ P + RGL +C D MC G C Sbjct: 280 CLPGTCCDLREHLCTPHN--------RGLNNKCFDDCMCVEGLRC 316 >gi|18252045 ADAM metallopeptidase domain 33 isoform alpha preproprotein [Homo sapiens] Length = 813 Score = 34.7 bits (78), Expect = 0.068 Identities = 49/209 (23%), Positives = 68/209 (32%), Gaps = 33/209 (15%) Query: 36 RKGSQCLSDTDCNTR-------KFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVND 88 R G+QC + DC R C Q + C G C D G+ C Sbjct: 452 RPGAQC-AHGDCCVRCLLKPAGALCRQAMGDCDLPEFCTGTSSHCPPDVYLLDGSPCARG 510 Query: 89 VCTTMEDATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCL-- 146 + A P LE+Q + G HP E + S + G GQ+ E Sbjct: 511 SGYCWDGACPTLEQQCQQ-----LWGPGSHPAPEACFQVVNSAGDAHGNCGQDSEGHFLP 565 Query: 147 ---RTFDCGPGLC-------CARHFWTKICKPVLLEGQVCSRRG-------HKDTAQAPE 189 R CG C A H + V L+GQ + RG D Sbjct: 566 CAGRDALCGKLQCQGGKPSLLAPHM-VPVDSTVHLDGQEVTCRGALALPSAQLDLLGLGL 624 Query: 190 IFQRCDCGPGLLCRSQLTSNRQHARLRVC 218 + CGP ++C+S+ L+ C Sbjct: 625 VEPGTQCGPRMVCQSRRCRKNAFQELQRC 653 >gi|11968150 GDNF-inducible zinc finger protein 1 [Homo sapiens] Length = 711 Score = 32.7 bits (73), Expect = 0.26 Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 25/134 (18%) Query: 80 CPGTLCVNDVCTTMEDATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKG 139 CP + V T ME Q+ + +G A G ++E K P ++ + + Sbjct: 260 CPQDQSPDRVGTEME--------QVSKNEGCQA----GAELEELSKKAGPEEEEEEEEED 307 Query: 140 QEGESCLRTFDCGPGLCCARHFWTKICKPVLLEGQVCSRRGHKDTAQAPEIFQRCD-CGP 198 +EGE F C IC+ L + + A E+ RCD CG Sbjct: 308 EEGEKKKSNFKC------------SICEKAFLYEKSFLKHSKHRHGVATEVVYRCDTCGQ 355 Query: 199 GLLCRSQLTSNRQH 212 R L S+++H Sbjct: 356 TFANRCNLKSHQRH 369 >gi|24041040 ADAM metallopeptidase domain 33 isoform beta preproprotein [Homo sapiens] Length = 787 Score = 32.3 bits (72), Expect = 0.34 Identities = 47/195 (24%), Positives = 63/195 (32%), Gaps = 33/195 (16%) Query: 36 RKGSQCLSDTDCNTR-------KFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVND 88 R G+QC + DC R C Q + C G C D G+ C Sbjct: 452 RPGAQC-AHGDCCVRCLLKPAGALCRQAMGDCDLPEFCTGTSSHCPPDVYLLDGSPCARG 510 Query: 89 VCTTMEDATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCL-- 146 + A P LE+Q + G HP E + S + G GQ+ E Sbjct: 511 SGYCWDGACPTLEQQCQQ-----LWGPGSHPAPEACFQVVNSAGDAHGNCGQDSEGHFLP 565 Query: 147 ---RTFDCGPGLC-------CARHFWTKICKPVLLEGQVCSRRG-------HKDTAQAPE 189 R CG C A H + V L+GQ + RG D Sbjct: 566 CAGRDALCGKLQCQGGKPSLLAPHM-VPVDSTVHLDGQEVTCRGALALPSAQLDLLGLGL 624 Query: 190 IFQRCDCGPGLLCRS 204 + CGP ++C S Sbjct: 625 VEPGTQCGPRMVCNS 639 >gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1 [Homo sapiens] Length = 210 Score = 32.0 bits (71), Expect = 0.44 Identities = 34/141 (24%), Positives = 43/141 (30%), Gaps = 20/141 (14%) Query: 39 SQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMC---CPGTLCVNDVCTTMED 95 S C C + C QP +P C R C R + C C C VC Sbjct: 47 SSCCRPQCCQS--VCCQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPVCCQPTC 104 Query: 96 ATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLRTFDCGPGL 155 P + E T HP +PS S K Q C ++ C P Sbjct: 105 CRP-----------SCCETTCCHPRCCISSCCRPSCCVSSCCKPQ----CCQSVCCQPNC 149 Query: 156 CCARHFWTKICKPVLLEGQVC 176 C + C+P E C Sbjct: 150 CRPSCSISSCCRPSCCESSCC 170 Score = 28.1 bits (61), Expect = 6.3 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 3/52 (5%) Query: 39 SQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVC 90 S C C + C QP +P C+ R C ++ CC CV VC Sbjct: 132 SSCCKPQCCQS--VCCQPNCCRPSCSISSCCRPSC-CESSCCRPCCCVRPVC 180 >gi|122937343 platelet endothelial aggregation receptor 1 [Homo sapiens] Length = 1037 Score = 31.6 bits (70), Expect = 0.57 Identities = 47/174 (27%), Positives = 55/174 (31%), Gaps = 33/174 (18%) Query: 38 GSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRR-RCQRDAMCCPGTL---CVNDVCTTM 93 G C + C CL E C G R CQR C PG CV C Sbjct: 573 GVNCSNTCTCKNGGTCLP---ENGNCVCAPGFRGPSCQRS--CQPGRYGKRCVPCKCANH 627 Query: 94 EDATPILERQLDEQDGTH--AEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLRTFDC 151 P +GT G TG + P G GE+C +T C Sbjct: 628 SFCHP--------SNGTCYCLAGWTGPDCSQPCPP------------GHWGENCAQTCQC 667 Query: 152 GPGLCCARHFWTKICKPVLLEGQVCSRRGHKDTAQAPEIFQRCDCGPGLLCRSQ 205 G C + IC P+ G C T A Q C CGPG C + Sbjct: 668 HHGGTCHPQDGSCIC-PLGWTGHHCLEGCPLGTFGA-NCSQPCQCGPGEKCHPE 719 >gi|21464119 methyl-CpG binding domain protein 1 isoform PCM1 [Homo sapiens] Length = 556 Score = 30.8 bits (68), Expect = 0.98 Identities = 36/160 (22%), Positives = 51/160 (31%), Gaps = 12/160 (7%) Query: 9 LSWLCSPLGALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRG 68 L LC A + FN + G C + DC CL+P + Sbjct: 150 LKTLCKDCRAQRIAFNREQRMFKSRGCGVCRGCQTQEDCGHCPICLRP-PRPGLRRQWKC 208 Query: 69 LRRRCQRDAMCCPGTLCVNDVCTTMEDAT----PILERQLDEQDGTHAEGTTGHPVQE-- 122 ++RRC R C + + P Q E H P E Sbjct: 209 VQRRCLRGKHARRKGGCDSKMAARRRPGAQPLPPPPPSQSPEPTEPHPRALAPSPPAEFI 268 Query: 123 ----NQPKRKPSIKKSQGRKGQEGESCLRTFDCGP-GLCC 157 ++ + +P + Q RK +CLR DCG CC Sbjct: 269 YYCVDEDELQPYTNRRQNRKCGACAACLRRMDCGRCDFCC 308 >gi|225690551 keratin associated protein 4-9 [Homo sapiens] Length = 210 Score = 30.4 bits (67), Expect = 1.3 Identities = 33/141 (23%), Positives = 42/141 (29%), Gaps = 20/141 (14%) Query: 39 SQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMC---CPGTLCVNDVCTTMED 95 S C C + C QP +P C R C R + C C C C Sbjct: 47 SSCCRPQCCQS--VCCQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCCQPACCQPTC 104 Query: 96 ATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLRTFDCGPGL 155 P + E T HP +PS S K Q C ++ C P Sbjct: 105 CRP-----------SCCETTCCHPRCCISSCCRPSCCVSSCCKPQ----CCQSVCCQPNC 149 Query: 156 CCARHFWTKICKPVLLEGQVC 176 C + C+P E C Sbjct: 150 CRPSCSISSCCRPSCCESSCC 170 Score = 28.1 bits (61), Expect = 6.3 Identities = 16/52 (30%), Positives = 21/52 (40%), Gaps = 3/52 (5%) Query: 39 SQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVC 90 S C C + C QP +P C+ R C ++ CC CV VC Sbjct: 132 SSCCKPQCCQS--VCCQPNCCRPSCSISSCCRPSC-CESSCCRPCCCVRPVC 180 >gi|154759249 keratin associated protein 10-11 [Homo sapiens] Length = 298 Score = 30.0 bits (66), Expect = 1.7 Identities = 40/170 (23%), Positives = 58/170 (34%), Gaps = 15/170 (8%) Query: 9 LSWLCSPLGALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRG 68 LS +C+P+ + SS A + S C S + C Q +P C T Sbjct: 43 LSLVCTPVSCV--------SSPCCQAACEPSACQSGCTSSCTPSCCQQSSCQPACCTSSP 94 Query: 69 LRRRCQRDAMCCPGTLCVNDVCTTME--DATPILERQLDEQDGTHAEGTTGHPVQENQPK 126 ++ C +CC T+C VC A RQ Q A + P Sbjct: 95 CQQAC-CVPVCCK-TVCCKPVCCVPVCCGAASSCCRQSSCQPACCASSSC-QPACCVPVC 151 Query: 127 RKPSIKKSQGRKGQEGESCLRTFDCGPGLCCARHFWTKICKPVLLEGQVC 176 KP S ++ SC + C P C + + C PV + C Sbjct: 152 CKPVCCVS--TCSEDSSSCCQQSSCQPACCTSSSYQQACCVPVCCKTVYC 199 >gi|183396797 keratin associated protein KRTAP2.1A [Homo sapiens] Length = 128 Score = 29.6 bits (65), Expect = 2.2 Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 12/61 (19%) Query: 41 CLSDTDCNT---RKFCLQPRDEKPFCATCR--------GLRRRCQRDAMCCPGTLCVNDV 89 C C T R PR +P C CR L+ C R CCP + C V Sbjct: 30 CCRPVTCQTTVCRPVTCVPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSS-CTAVV 88 Query: 90 C 90 C Sbjct: 89 C 89 >gi|15082232 keratin associated protein 2-4 [Homo sapiens] Length = 128 Score = 29.6 bits (65), Expect = 2.2 Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 12/61 (19%) Query: 41 CLSDTDCNT---RKFCLQPRDEKPFCATCR--------GLRRRCQRDAMCCPGTLCVNDV 89 C C T R PR +P C CR L+ C R CCP + C V Sbjct: 30 CCRPVTCQTTVCRPVTCVPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSS-CTAVV 88 Query: 90 C 90 C Sbjct: 89 C 89 >gi|225690576 keratin associated protein 2-2 [Homo sapiens] Length = 123 Score = 29.6 bits (65), Expect = 2.2 Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 12/61 (19%) Query: 41 CLSDTDCNT---RKFCLQPRDEKPFCATCR--------GLRRRCQRDAMCCPGTLCVNDV 89 C C T R PR +P C CR L+ C R CCP + C V Sbjct: 30 CCRPVTCQTTVCRPVTCVPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSS-CTAVV 88 Query: 90 C 90 C Sbjct: 89 C 89 >gi|113427417 PREDICTED: similar to keratin associated protein 2-4 [Homo sapiens] Length = 128 Score = 29.6 bits (65), Expect = 2.2 Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 12/61 (19%) Query: 41 CLSDTDCNT---RKFCLQPRDEKPFCATCR--------GLRRRCQRDAMCCPGTLCVNDV 89 C C T R PR +P C CR L+ C R CCP + C V Sbjct: 30 CCRPVTCQTTVCRPVTCVPRCTRPICEPCRRPVCCDPCSLQEGCCRPITCCPSS-CTAVV 88 Query: 90 C 90 C Sbjct: 89 C 89 >gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] Length = 1541 Score = 29.6 bits (65), Expect = 2.2 Identities = 22/67 (32%), Positives = 25/67 (37%), Gaps = 8/67 (11%) Query: 139 GQEGESCLRTFDCGPGLCCARHFWTKICKPVLLEGQVCS---RRGHKDTAQAPEIFQRCD 195 G GE C + DC G C +C P G C+ RRG P CD Sbjct: 1424 GSFGEGCHQRCDCDGGAPCDPVTGLCLCPPG-RSGATCNLDCRRGQ----FGPSCTLHCD 1478 Query: 196 CGPGLLC 202 CG G C Sbjct: 1479 CGGGADC 1485 >gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 isoform 3 [Homo sapiens] Length = 970 Score = 29.6 bits (65), Expect = 2.2 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 9/67 (13%) Query: 93 MEDATPILERQLDEQDGTHAEGTTGHPVQE-NQPKRKPSIKKSQGRKGQEGESCLRTFDC 151 +++ L++ L + GT EG+ G PV E QP + QG + EG C R+ Sbjct: 808 LQEKMAYLDQTLSPRPGTPREGSGGEPVHEGRQPVHR------QGHQAPEG-FCQRSAP- 859 Query: 152 GPGLCCA 158 GP +C A Sbjct: 860 GPAICPA 866 >gi|118572608 keratin associated protein 4-5 [Homo sapiens] Length = 181 Score = 29.6 bits (65), Expect = 2.2 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 9/60 (15%) Query: 39 SQCLSDTDCNT--------RKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVC 90 S C T C+ R +C + +P C R C R CCP + CV+ C Sbjct: 48 SVCYQPTCCHPSCCISSCCRPYCCESSCCRPCCCQTTCCRTTCCRTTCCCP-SCCVSSCC 106 >gi|22547108 tumor necrosis factor receptor superfamily, member 10d precursor [Homo sapiens] Length = 386 Score = 29.3 bits (64), Expect = 2.8 Identities = 21/73 (28%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Query: 34 GARKGSQCLS--DTDCNTRKFCLQPRDEKPFCATCR-GLRRRCQRDAMCCPGT--LCVND 88 G S C + DT C K Q ++ C TCR G R + + C P + C N+ Sbjct: 124 GQTNKSSCTTTRDTVCQCEKGSFQDKNSPEMCRTCRTGCPRGMVKVSNCTPRSDIKCKNE 183 Query: 89 VCTTMEDATPILE 101 + TP E Sbjct: 184 SAASSTGKTPAAE 196 >gi|21464115 methyl-CpG binding domain protein 1 isoform 2 [Homo sapiens] Length = 586 Score = 29.3 bits (64), Expect = 2.8 Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 27/129 (20%) Query: 50 RKFCLQPRDEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTMEDATPILERQLDEQDG 109 R+ CL+ + C CRG + Q D CP +C+ + ++R+ G Sbjct: 212 RRRCLRIVERSRGCGVCRGCQT--QEDCGHCP--ICLRPPRPGLRRQWKCVQRRCLR--G 265 Query: 110 THAEGTTG-------------------HPVQENQPKR-KPSIKKSQGRKGQEGESCLRTF 149 HA G P Q +P +P + Q RK +CLR Sbjct: 266 KHARRKGGCDSKMAARRRPGAQPLPPPPPSQSPEPTEPQPYTNRRQNRKCGACAACLRRM 325 Query: 150 DCGP-GLCC 157 DCG CC Sbjct: 326 DCGRCDFCC 334 >gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo sapiens] Length = 1281 Score = 29.3 bits (64), Expect = 2.8 Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 14/141 (9%) Query: 17 GALVLDFNNIRSSADLHGARKGSQCLSDTDCNTRKFCLQPRDEKPFCATCRGLRRRCQRD 76 GA L ++ S A LH A + LS L+ R + + R +R + Sbjct: 522 GAPELKIESLNSKAKLHAALYERKLLS----------LEVRKRRRRSSRLRAMRPKYP-- 569 Query: 77 AMCCPGTLCVNDVCTTMEDATPILERQLDEQDGTHAEGTTGHPVQENQPKRKPSIKKSQG 136 + P + V + E+ L+ + +EQ+ + E ++ENQ K PS+ Sbjct: 570 VITQPAEMNVKTETESEEEEEVALDNEDEEQEASQEESAGF--LRENQAKYTPSLTALVE 627 Query: 137 RKGQEGESCLRTFDCGPGLCC 157 +E +R ++ G CC Sbjct: 628 NTPKENSMKVREWNNKGGHCC 648 >gi|30089980 chordin [Homo sapiens] Length = 955 Score = 28.9 bits (63), Expect = 3.7 Identities = 33/118 (27%), Positives = 42/118 (35%), Gaps = 23/118 (19%) Query: 61 PFCATCRGLRRRCQRDAMCCPGTLCVN---------DVCTTMEDA--TPILERQLDEQDG 109 P C+ C RR D + CP C + VC +D P L R D +G Sbjct: 724 PLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEG 783 Query: 110 TH--------AEGTTGHPVQENQPKRKPSIKKSQGRKGQEGESCLRTFDCGPGLCCAR 159 + A GT HPV K ++ KG GE C P L CA+ Sbjct: 784 CYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTC---KGGTGEVHCEKVQC-PRLACAQ 837 >gi|56699495 WAP four-disulfide core domain 2 precursor [Homo sapiens] Length = 124 Score = 28.9 bits (63), Expect = 3.7 Identities = 20/75 (26%), Positives = 30/75 (40%), Gaps = 16/75 (21%) Query: 40 QCLSDTDC---------NTRKFCLQPRDEKPFCATCR------GL-RRRCQRDAMCCPGT 83 +C+SD++C FC P D++ C GL R +CQ D+ C Sbjct: 48 ECVSDSECADNLKCCSAGCATFCSLPNDKEGSCPQVNINFPQLGLCRDQCQVDSQCPGQM 107 Query: 84 LCVNDVCTTMEDATP 98 C + C + TP Sbjct: 108 KCCRNGCGKVSCVTP 122 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.323 0.137 0.454 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,606,556 Number of Sequences: 37866 Number of extensions: 551481 Number of successful extensions: 1661 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 37 Number of HSP's that attempted gapping in prelim test: 1587 Number of HSP's gapped (non-prelim): 92 length of query: 224 length of database: 18,247,518 effective HSP length: 98 effective length of query: 126 effective length of database: 14,536,650 effective search space: 1831617900 effective search space used: 1831617900 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.