Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KRTAP2-2 Sequence: fasta or formatted (123aa) NCBI GI: 225690576
Description:

keratin associated protein 2-2

Referenced in:

Keratins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.6          2           1
 C cysteine           26.8         33           3
 D aspartate           1.6          2           1
 E glutamate           1.6          2           1
 F phenylalanine       0.8          1           1
 G glycine             5.7          7           3
 H histidine           0.0          0           0
 I isoleucine          1.6          2           1
 K lysine              0.0          0           0
 L leucine             1.6          2           1
 M methionine          0.8          1           1
 N asparagine          0.0          0           0
 P proline            13.0         16           1
 Q glutamine           4.9          6           1
 R arginine            8.1         10           2
 S serine             10.6         13           2
 T threonine          12.2         15           2
 V valine              7.3          9           2
 W tryptophan          0.8          1           1
 Y tyrosine            0.8          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   keratin associated protein 2-2 
KRTAP2-1              0.978   keratin associated protein KRTAP2.1A 
KRTAP2-4              0.971   keratin associated protein 2-4 
LOC730755             0.971   PREDICTED: similar to keratin associated protein 2-...
KRTAP4-9              0.356   PREDICTED: keratin associated protein 4-9 isoform 2...
KRTAP4-2              0.345   keratin associated protein 4-2 
KRTAP4-11             0.342   keratin associated protein 4-11 
KRTAP4-3              0.342   keratin associated protein 4-3 
KRTAP4-12             0.342   keratin associated protein 4-12 
KRTAP4-8              0.342   PREDICTED: keratin associated protein 4-8 
KRTAP4-9              0.342   keratin associated protein 4-9 
KRTAP4-9              0.338   PREDICTED: keratin associated protein 4-9 isoform 1...
KRTAP4-5              0.335   keratin associated protein 4-5 
KRTAP4-8              0.331   PREDICTED: keratin associated protein 4-8 isoform 3...
LOC100134267          0.331   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-7              0.324   keratin associated protein 4-7 
KRTAP4-7              0.324   PREDICTED: keratin associated protein 4-7 
KRTAP4-8              0.320   PREDICTED: keratin associated protein 4-8 isoform 2...
LOC100134267          0.320   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.316   PREDICTED: keratin associated protein 4-8 isoform 1...
LOC100134267          0.316   PREDICTED: similar to keratin associated protein 4-...
KRTAP4-8              0.316   PREDICTED: keratin associated protein 4.8 
KRTAP4-8              0.316   keratin associated protein 4.8 
KRTAP4-4              0.309   keratin associated protein 4.4 
KRTAP4-1              0.284   keratin associated protein 4-1 
LOC728318             0.276   PREDICTED: hypothetical protein 
LOC728318             0.276   PREDICTED: hypothetical protein 
LOC728318             0.276   PREDICTED: hypothetical protein 
KRTAP9-8              0.258   keratin associated protein 9.8 
KRTAP9-4              0.258   keratin associated protein 9-4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press