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Search of human proteins with 75991709
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|75991709 lymphocyte antigen 9 isoform b [Homo sapiens]
(193 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|75991709 lymphocyte antigen 9 isoform b [Homo sapiens] 380 e-106
gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens] 301 2e-82
gi|226342992 SLAM family member 9 isoform 2 [Homo sapiens] 73 1e-13
gi|4502687 CD84 molecule [Homo sapiens] 73 1e-13
gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens] 71 5e-13
gi|41872631 fatty acid synthase [Homo sapiens] 65 3e-11
gi|16418407 activating NK receptor precursor [Homo sapiens] 61 5e-10
gi|19923572 SLAM family member 7 [Homo sapiens] 52 2e-07
gi|226342994 SLAM family member 9 isoform 3 [Homo sapiens] 36 0.018
gi|63054855 erythroblast membrane-associated protein precursor [... 35 0.040
gi|19923536 erythroblast membrane-associated protein precursor [... 35 0.040
gi|157168355 CD22 molecule [Homo sapiens] 33 0.12
gi|59939900 opioid binding protein/cell adhesion molecule-like i... 33 0.12
gi|31377806 polymeric immunoglobulin receptor precursor [Homo sa... 33 0.15
gi|4505505 opioid binding protein/cell adhesion molecule-like is... 32 0.44
gi|5729776 CD300C antigen [Homo sapiens] 32 0.44
gi|71773480 aldehyde oxidase 1 [Homo sapiens] 31 0.75
gi|209413732 poliovirus receptor isoform delta [Homo sapiens] 31 0.75
gi|209413730 poliovirus receptor isoform gamma [Homo sapiens] 31 0.75
gi|209413728 poliovirus receptor isoform beta [Homo sapiens] 31 0.75
gi|209413726 poliovirus receptor isoform alpha [Homo sapiens] 31 0.75
gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo sapi... 31 0.75
gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b ... 30 0.98
gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a [... 30 0.98
gi|253970427 immunoglobulin superfamily, member 22 [Homo sapiens] 30 1.3
gi|11225256 uncoupling protein 1 [Homo sapiens] 30 1.7
gi|221316762 neurotrimin isoform 4 [Homo sapiens] 29 2.2
gi|221316757 neurotrimin isoform 3 [Homo sapiens] 29 2.2
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 29 2.2
gi|7705413 neurotrimin isoform 1 [Homo sapiens] 29 2.2
>gi|75991709 lymphocyte antigen 9 isoform b [Homo sapiens]
Length = 193
Score = 380 bits (976), Expect = e-106
Identities = 193/193 (100%), Positives = 193/193 (100%)
Query: 1 MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG 60
MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG
Sbjct: 1 MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG 60
Query: 61 GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN 120
GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN
Sbjct: 61 GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN 120
Query: 121 LTLNDAGSYKAQINQRNFEVTTEEEFTLFVYAPFIEKLSVHVIEGDHRTLLEGSGLESII 180
LTLNDAGSYKAQINQRNFEVTTEEEFTLFVYAPFIEKLSVHVIEGDHRTLLEGSGLESII
Sbjct: 121 LTLNDAGSYKAQINQRNFEVTTEEEFTLFVYAPFIEKLSVHVIEGDHRTLLEGSGLESII 180
Query: 181 STLAEPRVSVREG 193
STLAEPRVSVREG
Sbjct: 181 STLAEPRVSVREG 193
>gi|55925578 lymphocyte antigen 9 isoform a [Homo sapiens]
Length = 655
Score = 301 bits (771), Expect = 2e-82
Identities = 156/168 (92%), Positives = 157/168 (93%), Gaps = 4/168 (2%)
Query: 1 MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG 60
MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG
Sbjct: 1 MVAPKSHTDDWAPGPFSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILG 60
Query: 61 GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN 120
GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN
Sbjct: 61 GSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISN 120
Query: 121 LTLNDAGSYKAQINQRNFEVTTEEEFTLFVY----APFIEKLSVHVIE 164
LTLNDAGSYKAQINQRNFEVTTEEEFTLFVY P + SV V E
Sbjct: 121 LTLNDAGSYKAQINQRNFEVTTEEEFTLFVYEQLQEPQVTMKSVKVSE 168
Score = 49.3 bits (116), Expect = 2e-06
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 47 GKDSAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPK-ENVTIMVKS--- 102
G + TVV G+LG VTLPL + + E V+W+ + ++ R + ++KS
Sbjct: 250 GGTTGETVV-GVLGEPVTLPLALPACRDTEKVVWLFNTSIISKEREEAATADPLIKSRDP 308
Query: 103 YLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVY 151
Y R+ ++ SL IS L + DAG Y A + VT+ TL +Y
Sbjct: 309 YKNRVWVSSQDCSLKISQLKIEDAGPYHAYVCSEASSVTSMTHVTLLIY 357
>gi|226342992 SLAM family member 9 isoform 2 [Homo sapiens]
Length = 198
Score = 73.2 bits (178), Expect = 1e-13
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 55 VSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN--VTIMVKS--YLGRLDIT 110
V +L S++LPL I D E+EN+IW K+ KE TIMV + Y G++
Sbjct: 30 VVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQVSFL 89
Query: 111 KWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYAP 153
SYSL ISNL+ D+G Y+AQ+N R +++T +++ + VY P
Sbjct: 90 DPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVYHP 132
>gi|4502687 CD84 molecule [Homo sapiens]
Length = 328
Score = 73.2 bits (178), Expect = 1e-13
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Query: 36 LLFLLMGLRASGKDSAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN 95
LL L A+GKDS V+GILG SVT P+NI +++ + W K ++A+ P ++
Sbjct: 10 LLCLQTWPEAAGKDSEIFTVNGILGESVTFPVNIQEPRQVKIIAWTS-KTSVAYVTPGDS 68
Query: 96 -----VTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFV 150
VT+ ++Y R+ +Y+L IS+L + DAG YKA IN + TT + + L +
Sbjct: 69 ETAPVVTVTHRNYYERIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTTTKRYNLQI 128
Query: 151 Y 151
Y
Sbjct: 129 Y 129
>gi|226342990 SLAM family member 9 isoform 1 [Homo sapiens]
Length = 289
Score = 71.2 bits (173), Expect = 5e-13
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 55 VSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN--VTIMVKS--YLGRLDIT 110
V +L S++LPL I D E+EN+IW K+ KE TIMV + Y G++
Sbjct: 30 VVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQVSFL 89
Query: 111 KWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVY 151
SYSL ISNL+ D+G Y+AQ+N R +++T +++ + VY
Sbjct: 90 DPSYSLHISNLSWEDSGLYQAQVNLRTSQISTMQQYNICVY 130
>gi|41872631 fatty acid synthase [Homo sapiens]
Length = 2511
Score = 65.5 bits (158), Expect = 3e-11
Identities = 35/41 (85%), Positives = 37/41 (90%), Gaps = 4/41 (9%)
Query: 157 KLSVHVIEGDHRTLLEGSGLESII----STLAEPRVSVREG 193
K+SVHVIEGDHRTLLEGSGLESII S+LAEPRVSVREG
Sbjct: 2471 KVSVHVIEGDHRTLLEGSGLESIISIIHSSLAEPRVSVREG 2511
>gi|16418407 activating NK receptor precursor [Homo sapiens]
Length = 331
Score = 61.2 bits (147), Expect = 5e-10
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 35 SLLFLLM---GLRASGKDSAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFAR 91
SLLF+ G S P +V+GILG SVTLPL ++ + W+ + +LAF
Sbjct: 7 SLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIV 66
Query: 92 PKE----NVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQR 136
P E + + RL+ T+ SYSL +SNL + D GSY+AQI+ +
Sbjct: 67 PHETKSPEIHVTNPKQGKRLNFTQ-SYSLQLSNLKMEDTGSYRAQISTK 114
>gi|19923572 SLAM family member 7 [Homo sapiens]
Length = 335
Score = 52.4 bits (124), Expect = 2e-07
Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 35 SLLFLLMGLRASGKDSAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKE 94
+L+++L L S + G +GG+VT PL V ++++++W L +P+
Sbjct: 9 TLIYILWQLTGSAASGPVKELVGSVGGAVTFPLKSKVK-QVDSIVWTFNTTPLVTIQPEG 67
Query: 95 NVTIMVKSY-LGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVY 151
I+ ++ R+D YSL +S L ND+G Y I + + + +E+ L VY
Sbjct: 68 GTIIVTQNRNRERVDFPDGGYSLKLSKLKKNDSGIYYVGIYSSSLQQPSTQEYVLHVY 125
>gi|226342994 SLAM family member 9 isoform 3 [Homo sapiens]
Length = 111
Score = 36.2 bits (82), Expect = 0.018
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 55 VSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKEN--VTIMVKS--YLGRL 107
V +L S++LPL I D E+EN+IW K+ KE TIMV + Y G++
Sbjct: 30 VVAVLQESISLPLEIPPDEEVENIIWSSHKSLATVVPGKEGHPATIMVTNPHYQGQI 86
>gi|63054855 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 35.0 bits (79), Expect = 0.040
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 36 LLFLLMGLRASGK-DSAPTVVSGILGGSVTL--PLNISVDTEIENVIWIG---PKNALA- 88
L+FL + + SG A +LGG+ L PL++ T + V W+ P+ + A
Sbjct: 18 LVFLRLSVHVSGHAGDAGKFHVALLGGTAELLCPLSLWPGTVPKEVRWLRSPFPQRSQAV 77
Query: 89 --FARPKENVTIMVKSYLGRL----DITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTT 142
F K+ ++ Y GR D + S +L I ++ L D GSY+ I N ++
Sbjct: 78 HIFRDGKDQDEDLMPEYKGRTVLVRDAQEGSVTLQILDVRLEDQGSYRCLIQVGN--LSK 135
Query: 143 EEEFTLFVYAPFIEKLS 159
E+ L V AP + LS
Sbjct: 136 EDTVILQVAAPSVGSLS 152
>gi|19923536 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 35.0 bits (79), Expect = 0.040
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 36 LLFLLMGLRASGK-DSAPTVVSGILGGSVTL--PLNISVDTEIENVIWIG---PKNALA- 88
L+FL + + SG A +LGG+ L PL++ T + V W+ P+ + A
Sbjct: 18 LVFLRLSVHVSGHAGDAGKFHVALLGGTAELLCPLSLWPGTVPKEVRWLRSPFPQRSQAV 77
Query: 89 --FARPKENVTIMVKSYLGRL----DITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTT 142
F K+ ++ Y GR D + S +L I ++ L D GSY+ I N ++
Sbjct: 78 HIFRDGKDQDEDLMPEYKGRTVLVRDAQEGSVTLQILDVRLEDQGSYRCLIQVGN--LSK 135
Query: 143 EEEFTLFVYAPFIEKLS 159
E+ L V AP + LS
Sbjct: 136 EDTVILQVAAPSVGSLS 152
>gi|157168355 CD22 molecule [Homo sapiens]
Length = 847
Score = 33.5 bits (75), Expect = 0.12
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 64 TLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDITKW----------- 112
T+ LN+ ++E I + P +A+ +T V S W
Sbjct: 233 TVQLNVKHTPKLE--IKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQN 290
Query: 113 SYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYAPFIEKLSVHVIEGDHRTLLE 172
+++L + +T + +G Y Q++ +EE F YAP E +V ++ H +E
Sbjct: 291 TFTLNLREVTKDQSGKYCCQVSNDVGPGRSEEVFLQVQYAP--EPSTVQIL---HSPAVE 345
Query: 173 GSGLESIISTLAEP 186
GS +E + +LA P
Sbjct: 346 GSQVEFLCMSLANP 359
>gi|59939900 opioid binding protein/cell adhesion molecule-like
isoform b preproprotein [Homo sapiens]
Length = 338
Score = 33.5 bits (75), Expect = 0.12
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 25/177 (14%)
Query: 27 IFSSVLQTSLLFLLMGLRASGKDSAPTVVSGIL---GGSVTLPLNISVDTEIENVIWIGP 83
+FS+ T+LLF+ SG + P + + G S TL ++D + V W+
Sbjct: 9 VFSAT--TALLFIPGVPVRSGDATFPKAMDNVTVRQGESATL--RCTIDDRVTRVAWLNR 64
Query: 84 KNALAFARPKENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTE 143
L K ++ V + T YS+ I N+ + D G Y + N T+
Sbjct: 65 STILYAGNDKWSIDPRVIILVN----TPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSR 120
Query: 144 EEFTLFVYAPFIEKLSVHVIEGDHRTLLEGSGLESIISTLAEP-------RVSVREG 193
+ V P I +S + T+ EGS + + + P +SV+EG
Sbjct: 121 VHLIVQV-PPQIMNISSDI------TVNEGSSVTLLCLAIGRPEPTVTWRHLSVKEG 170
>gi|31377806 polymeric immunoglobulin receptor precursor [Homo
sapiens]
Length = 764
Score = 33.1 bits (74), Expect = 0.15
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 23/143 (16%)
Query: 51 APTVVSGILGGSVTL--PLNISVDTEIEN-VIWIGPKNALAFARPKENVTIMVKSYLGRL 107
+PTVV G+ GGSV + P N I+ +W G +N + + Y GRL
Sbjct: 355 SPTVVKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQ-YEGRL 413
Query: 108 DITK----WSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYAPFIEKLSVHVI 163
+ + ++++ ++ LT DAG Y N TT E + +I
Sbjct: 414 SLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVE---------------IKII 458
Query: 164 EGDHRTLLEGSGLESIISTLAEP 186
EG+ + G+ + TL P
Sbjct: 459 EGEPNLKVPGNVTAVLGETLKVP 481
>gi|4505505 opioid binding protein/cell adhesion molecule-like
isoform a preproprotein [Homo sapiens]
Length = 345
Score = 31.6 bits (70), Expect = 0.44
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 25/175 (14%)
Query: 31 VLQTSLLFLL-MGLRA-SGKDSAPTVVSGIL---GGSVTLPLNISVDTEIENVIWIGPKN 85
V+ LLFL+ G+ SG + P + + G S TL ++D + V W+
Sbjct: 16 VVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATL--RCTIDDRVTRVAWLNRST 73
Query: 86 ALAFARPKENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEE 145
L K ++ V + T YS+ I N+ + D G Y + N T+
Sbjct: 74 ILYAGNDKWSIDPRVIILVN----TPTQYSIMIQNVDVYDEGPYTCSVQTDNHPKTSRVH 129
Query: 146 FTLFVYAPFIEKLSVHVIEGDHRTLLEGSGLESIISTLAEP-------RVSVREG 193
+ V P I +S + T+ EGS + + + P +SV+EG
Sbjct: 130 LIVQV-PPQIMNISSDI------TVNEGSSVTLLCLAIGRPEPTVTWRHLSVKEG 177
>gi|5729776 CD300C antigen [Homo sapiens]
Length = 224
Score = 31.6 bits (70), Expect = 0.44
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 50 SAPTVVSGILGGSVTLPLNISVDTEIENVIWIGPKNALAFARPKENVTIMVKSYLGRLDI 109
S P V+G +GGS+++ + N W P L + E K GR+ I
Sbjct: 26 SHPMTVAGPVGGSLSVQCRYEKEHRTLNKFWCRPPQILRCDKIVETKGSAGKRN-GRVSI 84
Query: 110 ----TKWSYSLCISNLTLNDAGSY 129
S+++ + NLT DAG+Y
Sbjct: 85 RDSPANLSFTVTLENLTEEDAGTY 108
>gi|71773480 aldehyde oxidase 1 [Homo sapiens]
Length = 1338
Score = 30.8 bits (68), Expect = 0.75
Identities = 12/59 (20%), Positives = 28/59 (47%)
Query: 112 WSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYAPFIEKLSVHVIEGDHRTL 170
W+ + ++ L+ G ++ + N+E + F FVY ++ + + GDH+ +
Sbjct: 1125 WAQTAFDESINLSAVGYFRGYESDMNWEKGEGQPFEYFVYGAACSEVEIDCLTGDHKNI 1183
>gi|209413732 poliovirus receptor isoform delta [Homo sapiens]
Length = 392
Score = 30.8 bits (68), Expect = 0.75
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 51 APTVVSGILGGSVTLPLNISVD----TEIENVIWI--GPKNALAFAR----PKENVTIMV 100
APT V G LG SVTLP + V T + + W G ++A P + + +
Sbjct: 33 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRL 92
Query: 101 KSYLGRLDITKWSYSLCISNLTLNDAGSY 129
+ RL + SL + L + D G+Y
Sbjct: 93 EFVAARLGAELRNASLRMFGLRVEDEGNY 121
>gi|209413730 poliovirus receptor isoform gamma [Homo sapiens]
Length = 364
Score = 30.8 bits (68), Expect = 0.75
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 51 APTVVSGILGGSVTLPLNISVD----TEIENVIWI--GPKNALAFAR----PKENVTIMV 100
APT V G LG SVTLP + V T + + W G ++A P + + +
Sbjct: 33 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRL 92
Query: 101 KSYLGRLDITKWSYSLCISNLTLNDAGSY 129
+ RL + SL + L + D G+Y
Sbjct: 93 EFVAARLGAELRNASLRMFGLRVEDEGNY 121
>gi|209413728 poliovirus receptor isoform beta [Homo sapiens]
Length = 372
Score = 30.8 bits (68), Expect = 0.75
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 51 APTVVSGILGGSVTLPLNISVD----TEIENVIWI--GPKNALAFAR----PKENVTIMV 100
APT V G LG SVTLP + V T + + W G ++A P + + +
Sbjct: 33 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRL 92
Query: 101 KSYLGRLDITKWSYSLCISNLTLNDAGSY 129
+ RL + SL + L + D G+Y
Sbjct: 93 EFVAARLGAELRNASLRMFGLRVEDEGNY 121
>gi|209413726 poliovirus receptor isoform alpha [Homo sapiens]
Length = 417
Score = 30.8 bits (68), Expect = 0.75
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 10/89 (11%)
Query: 51 APTVVSGILGGSVTLPLNISVD----TEIENVIWI--GPKNALAFAR----PKENVTIMV 100
APT V G LG SVTLP + V T + + W G ++A P + + +
Sbjct: 33 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRL 92
Query: 101 KSYLGRLDITKWSYSLCISNLTLNDAGSY 129
+ RL + SL + L + D G+Y
Sbjct: 93 EFVAARLGAELRNASLRMFGLRVEDEGNY 121
>gi|156616284 pregnancy specific beta-1-glycoprotein 9 [Homo
sapiens]
Length = 426
Score = 30.8 bits (68), Expect = 0.75
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 96 VTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYAPFI 155
+ I +Y GR + + SL I N+T DAG+Y I +R E T EE F + ++
Sbjct: 88 IIIYGPAYSGRETVYS-NASLLIQNVTRKDAGTYTLHIIKRGDE--TREEIRHFTFTLYL 144
Query: 156 E 156
E
Sbjct: 145 E 145
>gi|194328710 pregnancy specific beta-1-glycoprotein 8 isoform b
[Homo sapiens]
Length = 419
Score = 30.4 bits (67), Expect = 0.98
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 96 VTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQI---NQRNFEVTTEEEFTLFVYA 152
+ I +Y GR I + SL I N+T DAGSY I N VT FTL++
Sbjct: 88 IIIYGPAYSGRETIYS-NASLLIQNVTQEDAGSYTLHIIMGGDENRGVTGHFTFTLYLET 146
Query: 153 P 153
P
Sbjct: 147 P 147
>gi|51510887 pregnancy specific beta-1-glycoprotein 8 isoform a
[Homo sapiens]
Length = 426
Score = 30.4 bits (67), Expect = 0.98
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 96 VTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQI---NQRNFEVTTEEEFTLFVYA 152
+ I +Y GR I + SL I N+T DAGSY I N VT FTL++
Sbjct: 88 IIIYGPAYSGRETIYS-NASLLIQNVTQEDAGSYTLHIIMGGDENRGVTGHFTFTLYLET 146
Query: 153 P 153
P
Sbjct: 147 P 147
>gi|253970427 immunoglobulin superfamily, member 22 [Homo sapiens]
Length = 1326
Score = 30.0 bits (66), Expect = 1.3
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 98 IMVKSYLGRLDITKWS--YSLCISNLTLNDAGSYKAQINQRNF--EVTTEEE 145
+ ++ LG+ D+ + Y L ISN+ +NDAG Y + + E+T +E
Sbjct: 275 LRIQYSLGKYDVKQMGTKYMLVISNVNMNDAGIYSLSVGDKRMSAELTVLDE 326
>gi|11225256 uncoupling protein 1 [Homo sapiens]
Length = 307
Score = 29.6 bits (65), Expect = 1.7
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 16 FSSKPQRSQLQIFSSVLQTSLLFLLMGLRASGKDSAPTVVSGILGGSVT--LPLNISVDT 73
+S P Q QI S+ L+ L + +GK++AP++ S IL G T + + I T
Sbjct: 75 YSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAGLTTGGVAVFIGQPT 134
Query: 74 EIENV 78
E+ V
Sbjct: 135 EVVKV 139
>gi|221316762 neurotrimin isoform 4 [Homo sapiens]
Length = 316
Score = 29.3 bits (64), Expect = 2.2
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 12/146 (8%)
Query: 31 VLQTSLLFLL-MGLRA-SGKDSAPTVVSGIL---GGSVTLPLNISVDTEIENVIWIGPKN 85
V+ LLFL+ G+ SG + P + + G S TL ++D + V W+
Sbjct: 16 VVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATL--RCTIDNRVTRVAWLNRST 73
Query: 86 ALAFARPKENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEE 145
L K + V L T+ YS+ I N+ + D G Y + N T+
Sbjct: 74 ILYAGNDKWCLDPRVVL----LSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVH 129
Query: 146 FTLFVYAPFIEKLS-VHVIEGDHRTL 170
+ V +E S + + EG++ +L
Sbjct: 130 LIVQVSPKIVEISSDISINEGNNISL 155
>gi|221316757 neurotrimin isoform 3 [Homo sapiens]
Length = 355
Score = 29.3 bits (64), Expect = 2.2
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 12/146 (8%)
Query: 31 VLQTSLLFLL-MGLRA-SGKDSAPTVVSGIL---GGSVTLPLNISVDTEIENVIWIGPKN 85
V+ LLFL+ G+ SG + P + + G S TL ++D + V W+
Sbjct: 16 VVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATL--RCTIDNRVTRVAWLNRST 73
Query: 86 ALAFARPKENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEE 145
L K + V L T+ YS+ I N+ + D G Y + N T+
Sbjct: 74 ILYAGNDKWCLDPRVVL----LSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVH 129
Query: 146 FTLFVYAPFIEKLS-VHVIEGDHRTL 170
+ V +E S + + EG++ +L
Sbjct: 130 LIVQVSPKIVEISSDISINEGNNISL 155
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 29.3 bits (64), Expect = 2.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 116 LCISNLTLNDAGSYKAQINQRNFEVTTEEEFTLFVYA----PFIEKLSVHVIEGDHRTLL 171
L I N+T+N++GSY Q + + + T+ VYA PFI + + +E + L
Sbjct: 284 LFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFITSNNSNPVEDEDAVAL 343
>gi|7705413 neurotrimin isoform 1 [Homo sapiens]
Length = 344
Score = 29.3 bits (64), Expect = 2.2
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 12/146 (8%)
Query: 31 VLQTSLLFLL-MGLRA-SGKDSAPTVVSGIL---GGSVTLPLNISVDTEIENVIWIGPKN 85
V+ LLFL+ G+ SG + P + + G S TL ++D + V W+
Sbjct: 16 VVSLRLLFLVPTGVPVRSGDATFPKAMDNVTVRQGESATL--RCTIDNRVTRVAWLNRST 73
Query: 86 ALAFARPKENVTIMVKSYLGRLDITKWSYSLCISNLTLNDAGSYKAQINQRNFEVTTEEE 145
L K + V L T+ YS+ I N+ + D G Y + N T+
Sbjct: 74 ILYAGNDKWCLDPRVVL----LSNTQTQYSIEIQNVDVYDEGPYTCSVQTDNHPKTSRVH 129
Query: 146 FTLFVYAPFIEKLS-VHVIEGDHRTL 170
+ V +E S + + EG++ +L
Sbjct: 130 LIVQVSPKIVEISSDISINEGNNISL 155
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,920,210
Number of Sequences: 37866
Number of extensions: 265381
Number of successful extensions: 811
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 769
Number of HSP's gapped (non-prelim): 91
length of query: 193
length of database: 18,247,518
effective HSP length: 97
effective length of query: 96
effective length of database: 14,574,516
effective search space: 1399153536
effective search space used: 1399153536
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.