Guide to the Human Genome
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Name: UCP1 Sequence: fasta or formatted (307aa) NCBI GI: 11225256
Description:

uncoupling protein 1

Referenced in:

Mitochondria
Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         25           2
 C cysteine            2.6          8           1
 D aspartate           2.9          9           2
 E glutamate           3.6         11           1
 F phenylalanine       4.2         13           2
 G glycine             8.8         27           2
 H histidine           1.3          4           1
 I isoleucine          5.5         17           2
 K lysine              5.5         17           1
 L leucine            10.1         31           1
 M methionine          2.6          8           1
 N asparagine          2.9          9           2
 P proline             4.9         15           2
 Q glutamine           3.9         12           1
 R arginine            4.2         13           1
 S serine              6.8         21           2
 T threonine           9.4         29           2
 V valine              9.1         28           2
 W tryptophan          0.7          2           1
 Y tyrosine            2.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   uncoupling protein 1 
UCP2                  0.562   uncoupling protein 2 
UCP3                  0.561   uncoupling protein 3 isoform UCP3L 
UCP3                  0.487   uncoupling protein 3 isoform UCP3S 
SLC25A30              0.251   solute carrier family 25, member 30 
SLC25A14              0.251   solute carrier family 25, member 14 isoform UCP5L [Ho...
SLC25A14              0.251   solute carrier family 25, member 14 isoform UCP5S [H...
SLC25A27              0.250   solute carrier family 25, member 27 
SLC25A11              0.248   solute carrier family 25 (mitochondrial carrier; oxo...
SLC25A10              0.234   solute carrier family 25 (mitochondrial carrier; dic...
SLC25A34              0.178   solute carrier family 25, member 34 
C14orf68              0.132   chromosome 14 open reading frame 68 
SLC25A1               0.126   solute carrier family 25 (mitochondrial carrier; cit...
SLC25A35              0.125   solute carrier family 25, member 35 
SLC25A20              0.121   carnitine/acylcarnitine translocase 
SLC25A12              0.115   solute carrier family 25, member 12 
SLC25A31              0.111   solute carrier family 25 (mitochondrial carrier; ade...
SLC25A41              0.109   solute carrier family 25, member 41 
SLC25A13              0.106   solute carrier family 25, member 13 isoform 2 
SLC25A13              0.106   solute carrier family 25, member 13 isoform 1 [Homo...
SLC25A21              0.106   solute carrier family 25 (mitochondrial oxodicarboxy...
SLC25A24              0.106   solute carrier family 25 member 24 isoform 1 
SLC25A24              0.106   solute carrier family 25 member 24 isoform 2 
SLC25A38              0.104   solute carrier family 25, member 38 
LOC100292202          0.103   PREDICTED: similar to solute carrier family 25, mem...
LOC100292202          0.103   PREDICTED: similar to solute carrier family 25, mem...
SLC25A25              0.103   solute carrier family 25, member 25 isoform c 
SLC25A25              0.103   solute carrier family 25, member 25 isoform a 
SLC25A25              0.103   solute carrier family 25, member 25 isoform d 
SLC25A25              0.103   solute carrier family 25, member 25 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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