Guide to the Human Genome
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Name: LY9 Sequence: fasta or formatted (193aa) NCBI GI: 75991709
Description:

lymphocyte antigen 9 isoform b

Referenced in:

Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [655aa] lymphocyte antigen 9 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         11           1
 C cysteine            0.5          1           1
 D aspartate           3.6          7           2
 E glutamate           6.7         13           3
 F phenylalanine       4.1          8           1
 G glycine             6.7         13           2
 H histidine           1.6          3           1
 I isoleucine          7.3         14           2
 K lysine              4.7          9           1
 L leucine            11.4         22           2
 M methionine          1.6          3           1
 N asparagine          4.1          8           1
 P proline             5.2         10           1
 Q glutamine           3.1          6           1
 R arginine            4.1          8           1
 S serine             11.4         22           2
 T threonine           6.7         13           2
 V valine              7.8         15           2
 W tryptophan          1.6          3           1
 Y tyrosine            2.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lymphocyte antigen 9 isoform b 
LY9                   0.777   lymphocyte antigen 9 isoform a 
SLAMF9                0.135   SLAM family member 9 isoform 2 
CD84                  0.135   CD84 molecule 
SLAMF9                0.130   SLAM family member 9 isoform 1 
FASN                  0.113   fatty acid synthase 
SLAMF6                0.101   activating NK receptor precursor 
SLAMF7                0.076   SLAM family member 7 
SLAMF9                0.031   SLAM family member 9 isoform 3 
ERMAP                 0.028   erythroblast membrane-associated protein precursor [...
ERMAP                 0.028   erythroblast membrane-associated protein precursor [...
CD22                  0.023   CD22 molecule 
OPCML                 0.023   opioid binding protein/cell adhesion molecule-like i...
PIGR                  0.023   polymeric immunoglobulin receptor precursor 
OPCML                 0.020   opioid binding protein/cell adhesion molecule-like is...
CD300C                0.020   CD300C antigen 
AOX1                  0.017   aldehyde oxidase 1 
PVR                   0.017   poliovirus receptor isoform delta 
PVR                   0.017   poliovirus receptor isoform gamma 
PVR                   0.017   poliovirus receptor isoform beta 
PVR                   0.017   poliovirus receptor isoform alpha 
PSG9                  0.017   pregnancy specific beta-1-glycoprotein 9 
PSG8                  0.014   pregnancy specific beta-1-glycoprotein 8 isoform b ...
PSG8                  0.014   pregnancy specific beta-1-glycoprotein 8 isoform a [...
IGSF22                0.014   immunoglobulin superfamily, member 22 
UCP1                  0.014   uncoupling protein 1 
NTM                   0.011   neurotrimin isoform 4 
NTM                   0.011   neurotrimin isoform 3 
CEACAM5               0.011   carcinoembryonic antigen-related cell adhesion molec...
NTM                   0.011   neurotrimin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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