Guide to the Human Genome
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Name: TBL2 Sequence: fasta or formatted (447aa) NCBI GI: 7549793
Description:

transducin (beta)-like 2

Referenced in:

WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         44           3
 C cysteine            2.5         11           1
 D aspartate           4.5         20           2
 E glutamate           5.6         25           2
 F phenylalanine       4.9         22           1
 G glycine             6.9         31           2
 H histidine           3.1         14           1
 I isoleucine          3.1         14           1
 K lysine              7.2         32           3
 L leucine             8.7         39           2
 M methionine          2.7         12           1
 N asparagine          3.8         17           2
 P proline             3.1         14           2
 Q glutamine           4.5         20           3
 R arginine            7.2         32           2
 S serine              8.1         36           2
 T threonine           6.3         28           2
 V valine              5.1         23           2
 W tryptophan          1.6          7           1
 Y tyrosine            1.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transducin (beta)-like 2 
TAF5                  0.056   TBP-associated factor 5 
WDR51B                0.053   WD repeat domain 51B 
WDR51A                0.051   WD repeat domain 51A isoform 2 
TAF5L                 0.049   PCAF associated factor 65 beta isoform a 
CIAO1                 0.048   WD repeat domain 39 
WDR51A                0.048   WD repeat domain 51A isoform 1 
WDR51A                0.044   WD repeat domain 51A isoform 3 
WDSUB1                0.044   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.044   WD repeat, sterile alpha motif and U-box domain con...
WDSUB1                0.044   WD repeat, sterile alpha motif and U-box domain con...
NLE1                  0.042   Notchless gene homolog isoform a 
WDR5                  0.042   WD repeat domain 5 
WDR5                  0.042   WD repeat domain 5 
KATNB1                0.042   katanin p80 subunit B 1 
APAF1                 0.039   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.039   apoptotic peptidase activating factor 1 isoform b [Ho...
NLE1                  0.039   Notchless gene homolog isoform b 
APAF1                 0.038   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.038   apoptotic peptidase activating factor 1 isoform a [Ho...
WDR88                 0.038   PQQ repeat and WD repeat domain containing 
WDR69                 0.036   WD repeat domain 69 
PLRG1                 0.036   pleiotropic regulator 1 (PRL1 homolog, Arabidopsis) [...
TBL3                  0.035   transducin beta-like 3 
PAFAH1B1              0.034   platelet-activating factor acetylhydrolase, isoform I...
WDR38                 0.034   WD repeat domain 38 
PHIP                  0.033   pleckstrin homology domain interacting protein [Homo...
GNB2L1                0.032   guanine nucleotide binding protein (G protein), beta ...
WDR5B                 0.032   WD repeat domain 5B 
TBL1X                 0.031   transducin beta-like 1X isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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