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Search of human proteins with 74136549
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo
sapiens]
(1188 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo sapi... 2413 0.0
gi|47078224 AT rich interactive domain 5A [Homo sapiens] 192 1e-48
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 93 2e-18
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 92 4e-18
gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo ... 79 3e-14
gi|115334673 retinoblastoma-binding protein 1 isoform II [Homo s... 79 3e-14
gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo sa... 79 3e-14
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ... 60 9e-09
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 54 1e-06
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 54 1e-06
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 54 1e-06
gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo s... 53 2e-06
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens] 52 3e-06
gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive ... 52 3e-06
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 51 7e-06
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 49 2e-05
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 49 2e-05
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa... 49 2e-05
gi|5453638 AT rich interactive domain 3B [Homo sapiens] 49 2e-05
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 48 5e-05
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho... 48 5e-05
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H... 48 5e-05
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 48 6e-05
gi|226437579 NAC alpha domain containing [Homo sapiens] 47 8e-05
gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 47 8e-05
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 47 1e-04
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 47 1e-04
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 47 1e-04
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 46 2e-04
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 46 2e-04
>gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo sapiens]
Length = 1188
Score = 2413 bits (6253), Expect = 0.0
Identities = 1188/1188 (100%), Positives = 1188/1188 (100%)
Query: 1 MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL 60
MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL
Sbjct: 1 MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL 60
Query: 61 WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKW 120
WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKW
Sbjct: 61 WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKW 120
Query: 121 RCGFHAGPVKTEALGRNGQKEALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS 180
RCGFHAGPVKTEALGRNGQKEALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS
Sbjct: 121 RCGFHAGPVKTEALGRNGQKEALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS 180
Query: 181 YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESI 240
YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESI
Sbjct: 181 YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESI 240
Query: 241 CDEFAPNLKGRPRKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNC 300
CDEFAPNLKGRPRKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNC
Sbjct: 241 CDEFAPNLKGRPRKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNC 300
Query: 301 KKVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQ 360
KKVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQ
Sbjct: 301 KKVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQ 360
Query: 361 KLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPI 420
KLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPI
Sbjct: 361 KLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPI 420
Query: 421 KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLIS 480
KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLIS
Sbjct: 421 KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLIS 480
Query: 481 QKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540
QKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP
Sbjct: 481 QKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540
Query: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT 600
PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT
Sbjct: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT 600
Query: 601 TQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDK 660
TQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDK
Sbjct: 601 TQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDK 660
Query: 661 DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK 720
DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK
Sbjct: 661 DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK 720
Query: 721 KLIARDDLCSSLSQTHHGQSTDHMAVSRPSVIQHVQSFRSKPSEERKTINDIFKHEKLSR 780
KLIARDDLCSSLSQTHHGQSTDHMAVSRPSVIQHVQSFRSKPSEERKTINDIFKHEKLSR
Sbjct: 721 KLIARDDLCSSLSQTHHGQSTDHMAVSRPSVIQHVQSFRSKPSEERKTINDIFKHEKLSR 780
Query: 781 SDPHRCSFSKHHLNPLADSYVLKQEIQEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSL 840
SDPHRCSFSKHHLNPLADSYVLKQEIQEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSL
Sbjct: 781 SDPHRCSFSKHHLNPLADSYVLKQEIQEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSL 840
Query: 841 YRHTEHHLHNEQTSKYPSRDMYRESENSSFPSHRHQEKLHVNYLTSLHLQDKKSAAAEAP 900
YRHTEHHLHNEQTSKYPSRDMYRESENSSFPSHRHQEKLHVNYLTSLHLQDKKSAAAEAP
Sbjct: 841 YRHTEHHLHNEQTSKYPSRDMYRESENSSFPSHRHQEKLHVNYLTSLHLQDKKSAAAEAP 900
Query: 901 TDDQPTDLSLPKNPHKPTGKVLGLAHSTTGPQESKGISQFQVLGSQSRDCHPKACRVSPM 960
TDDQPTDLSLPKNPHKPTGKVLGLAHSTTGPQESKGISQFQVLGSQSRDCHPKACRVSPM
Sbjct: 901 TDDQPTDLSLPKNPHKPTGKVLGLAHSTTGPQESKGISQFQVLGSQSRDCHPKACRVSPM 960
Query: 961 TMSGPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLD 1020
TMSGPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLD
Sbjct: 961 TMSGPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLD 1020
Query: 1021 LVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLPLSSPIFPG 1080
LVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLPLSSPIFPG
Sbjct: 1021 LVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLPLSSPIFPG 1080
Query: 1081 LYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQL 1140
LYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQL
Sbjct: 1081 LYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQL 1140
Query: 1141 YRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL 1188
YRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL
Sbjct: 1141 YRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL 1188
>gi|47078224 AT rich interactive domain 5A [Homo sapiens]
Length = 594
Score = 192 bits (489), Expect = 1e-48
Identities = 101/200 (50%), Positives = 129/200 (64%), Gaps = 11/200 (5%)
Query: 295 KNNHNCKKVSNEEKPKVA---IGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQIN 351
K N +S E+ P+ E+ R +EQAFLV+LYK+MKER TPIER+P+LGFKQIN
Sbjct: 29 KQNGIQNPISLEDSPEAGGEREEEQEREEEQAFLVSLYKFMKERHTPIERVPHLGFKQIN 88
Query: 352 LWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKG 411
LW +++A +KLG YE +T RR WK++YDELGG+PGSTSAATCTRRHYERL+LPY R +KG
Sbjct: 89 LWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKG 148
Query: 412 EEDKPLPPIKPRKQENSSQEN-------ENKTKVSGTKRIKHEIPKSKKEKENAPKPQDA 464
E+DKPLP KPRKQ ++EN E K +R+ +P K P P +
Sbjct: 149 EDDKPLPTSKPRKQYKMAKENRGDDGATERPKKAKEERRMDQMMPGKTKADAADPAPLPS 208
Query: 465 AEVSSEQEKEQETLISQKSI 484
E EQ+ L S S+
Sbjct: 209 QE-PPRNSTEQQGLASGSSV 227
Score = 36.6 bits (83), Expect = 0.15
Identities = 17/22 (77%), Positives = 19/22 (86%)
Query: 679 YSRGNPGIMSPLAKKKLLSQVS 700
Y +G GIMSPLAKKKLL+QVS
Sbjct: 247 YCKGTHGIMSPLAKKKLLAQVS 268
Score = 32.0 bits (71), Expect = 3.6
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 21/108 (19%)
Query: 1013 KRSLEDLDLVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLP 1072
KRSLE+ +GK+ RAVSP KE K+ ++ G + G P
Sbjct: 444 KRSLEEEGAAHSGKRLRAVSPF--LKEADAKKCGAKPAGSGLVSCLLG-----------P 490
Query: 1073 LSSPIFPGLYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVL--SPLMQP 1118
P+ P Y G++ + LN ++ + LK Q L SPL+ P
Sbjct: 491 ALGPVPPEAYRGTMLHCPLN------FTGTPGPLKGQAALPFSPLVIP 532
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 92.8 bits (229), Expect = 2e-18
Identities = 126/599 (21%), Positives = 247/599 (41%), Gaps = 50/599 (8%)
Query: 304 SNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLG 363
S+EE+ ++ E + + FL LYK+M++R TPI + P LG++ +NL+ +F+ KLG
Sbjct: 295 SSEEEEEI---EPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLG 351
Query: 364 GYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPIKPR 423
G++ I + WK +Y +LG +++A + Y++ + +E + + + + +
Sbjct: 352 GFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEK 411
Query: 424 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQE---TLIS 480
+E EN ++ + + EI + K E+E P++ + E E+++ +L S
Sbjct: 412 VVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPSLGS 471
Query: 481 QKSIPEPLPA-ADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPT 539
+K++ E +P +D +K++ KP + +KD++T + S + EA E+
Sbjct: 472 KKNLLESIPTHSDQEKEVN-----IKKPEDNENLDDKDDDTTRVDESLNIKVEAEEEKAK 526
Query: 540 PPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFP 599
+ E D ++ D+ +E + C+ + + + +
Sbjct: 527 SGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNEEEEFECYPPGMKVQVRYGRGKNQK 586
Query: 600 TTQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDD--IHNALKQTPKV----LVVQS 653
+ + ++ E ++ + Y V+ D+ D + A K PK+ +
Sbjct: 587 MYEASI-KDSDVEGGEVLYLVHY-CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNK 644
Query: 654 FDMFKDKD-LTGPMNENHGLNYTPLLYSRGNPGIMSPL----AKKKLLSQVSGASLSSSY 708
D KDKD P N P + +P ++S L AK + + ++S
Sbjct: 645 LDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLTDAKNSDTAHIKSIEITSI- 703
Query: 709 PYGSPPPLISKKKLIARDDLCSSLSQTHHGQ---STDHMAVSRPSVIQHVQSFRSKPSEE 765
S + ++D + ++G+ DH+ +R +I + S EE
Sbjct: 704 -LNGLQASESSAEDSEQEDERGAQDMDNNGKEESKIDHLTNNRNDLISKEEQNSSSLLEE 762
Query: 766 RKTINDIFKHEKLSRSDPHRCSFSKHHLNPLADSYVLKQEIQEGKDKLLEKRALPHSHMP 825
K D+ + +S+S P R D VL ++ +D++ +KR +
Sbjct: 763 NKVHADLVISKPVSKS-PERLR---------KDIEVLSEDTDYEEDEVTKKR----KDVK 808
Query: 826 SFLADFYSSPHL---HSLYRHTEHHLHNEQTSKYPSRDMYRES---ENSSFPSHRHQEK 878
D S P + Y +TE L K + +ES ENSS S E+
Sbjct: 809 KDTTDKSSKPQIKRGKRRYCNTEECLKTGSPGKKEEKAKNKESLCMENSSNSSSDEDEE 867
>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
Length = 1226
Score = 91.7 bits (226), Expect = 4e-18
Identities = 60/237 (25%), Positives = 123/237 (51%), Gaps = 12/237 (5%)
Query: 304 SNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLG 363
S+EE+ ++ E + + FL LYK+M++R TPI + P LG++ +NL+ +F+ KLG
Sbjct: 295 SSEEEEEI---EPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLG 351
Query: 364 GYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPIKPR 423
G++ I + WK +Y +LG +++A + Y++ + +E + + + + +
Sbjct: 352 GFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEK 411
Query: 424 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQE---TLIS 480
+E EN ++ + + EI + K E+E P++ + E E+++ +L S
Sbjct: 412 VVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPSLGS 471
Query: 481 QKSIPEPLPA-ADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEK 536
+K++ E +P +D +K++ KP + +KD++T + S + EA E+
Sbjct: 472 KKNLLESIPTHSDQEKEVN-----IKKPEDNENLDDKDDDTTRVDESLNIKVEAEEE 523
>gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo
sapiens]
Length = 1188
Score = 78.6 bits (192), Expect = 3e-14
Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 63/284 (22%)
Query: 302 KVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQK 361
K + EE P+ + E R + FL LYK+M++R TPI + P LG+K +NL+ +F+
Sbjct: 296 KKTEEEVPEEELDPEERDN---FLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYH 352
Query: 362 LGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERF------------- 408
GG + I + WK IY +LG +++A+ + Y + + +E +
Sbjct: 353 QGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHH 412
Query: 409 -------------------IKGEEDKPLPPIKPRKQENSSQENENKTK------VSGTKR 443
+K +++ PL +K +EN +E++ + G +R
Sbjct: 413 HEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRR 472
Query: 444 IKHEIPKSKKE----------KENAPKPQDA-AEVSSEQEKEQETLISQKSIPEPLPAAD 492
I ++ KKE K+N + +D + + ++KE E L+ +K+ P+
Sbjct: 473 IARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPK-----Q 527
Query: 493 MKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEK 536
+KKI+ ++ + + E++ ++ + +E + GE+
Sbjct: 528 KEKKIKKQED------SDKDSDEEEEKSQEREETESKCDSEGEE 565
>gi|115334673 retinoblastoma-binding protein 1 isoform II [Homo
sapiens]
Length = 1203
Score = 78.6 bits (192), Expect = 3e-14
Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 63/284 (22%)
Query: 302 KVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQK 361
K + EE P+ + E R + FL LYK+M++R TPI + P LG+K +NL+ +F+
Sbjct: 296 KKTEEEVPEEELDPEERDN---FLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYH 352
Query: 362 LGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERF------------- 408
GG + I + WK IY +LG +++A+ + Y + + +E +
Sbjct: 353 QGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHH 412
Query: 409 -------------------IKGEEDKPLPPIKPRKQENSSQENENKTK------VSGTKR 443
+K +++ PL +K +EN +E++ + G +R
Sbjct: 413 HEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRR 472
Query: 444 IKHEIPKSKKE----------KENAPKPQDA-AEVSSEQEKEQETLISQKSIPEPLPAAD 492
I ++ KKE K+N + +D + + ++KE E L+ +K+ P+
Sbjct: 473 IARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPK-----Q 527
Query: 493 MKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEK 536
+KKI+ ++ + + E++ ++ + +E + GE+
Sbjct: 528 KEKKIKKQED------SDKDSDEEEEKSQEREETESKCDSEGEE 565
>gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo
sapiens]
Length = 1257
Score = 78.6 bits (192), Expect = 3e-14
Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 63/284 (22%)
Query: 302 KVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQK 361
K + EE P+ + E R + FL LYK+M++R TPI + P LG+K +NL+ +F+
Sbjct: 296 KKTEEEVPEEELDPEERDN---FLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYH 352
Query: 362 LGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERF------------- 408
GG + I + WK IY +LG +++A+ + Y + + +E +
Sbjct: 353 QGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHH 412
Query: 409 -------------------IKGEEDKPLPPIKPRKQENSSQENENKTK------VSGTKR 443
+K +++ PL +K +EN +E++ + G +R
Sbjct: 413 HEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRR 472
Query: 444 IKHEIPKSKKE----------KENAPKPQDA-AEVSSEQEKEQETLISQKSIPEPLPAAD 492
I ++ KKE K+N + +D + + ++KE E L+ +K+ P+
Sbjct: 473 IARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPK-----Q 527
Query: 493 MKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEK 536
+KKI+ ++ + + E++ ++ + +E + GE+
Sbjct: 528 KEKKIKKQED------SDKDSDEEEEKSQEREETESKCDSEGEE 565
>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
sapiens]
Length = 1835
Score = 60.5 bits (145), Expect = 9e-09
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 323 AFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELG 382
AFL L ++ R +P ++IP +G K+++L ++ LGG+ ++ + QW I +E
Sbjct: 18 AFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFN 77
Query: 383 GNPGSTSAATCTRRHYERLILPYERFIK-GEEDKPLPPIKPRKQ 425
++AA +++Y R + YE+ GE+D +PP P+ Q
Sbjct: 78 FPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKPQ 121
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo
sapiens]
Length = 2191
Score = 53.5 bits (127), Expect = 1e-06
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 267 GVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSN-----EEKPKV-AIGEECRAD 320
G+ D + + K +K + + T P+ KK S+ E+ KV +G E +
Sbjct: 954 GLADMMSPGESKLPLPLKADGKEEGT-PQPESKSKKSSSSTTTGEKITKVYELGNE--PE 1010
Query: 321 EQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 380
+ ++ +M+ER +P+ +P +G K ++L+ ++ +++GG + ++W+ +
Sbjct: 1011 RKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATN 1070
Query: 381 LGGNPG-STSAATCTRRHYERLILPYE-RFIKGEEDKP----------LPPIKPRKQENS 428
L N G S+SAA+ ++ Y + + +E + +GEE P P ++P NS
Sbjct: 1071 L--NVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANS 1128
Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKP 461
+T S E+P K A P
Sbjct: 1129 GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTP 1161
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo
sapiens]
Length = 2231
Score = 53.5 bits (127), Expect = 1e-06
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 26/222 (11%)
Query: 252 PRKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSNEEKPKV 311
P P SF G + + +S G ++ S+ T + ++ NE + K+
Sbjct: 994 PSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKL 1053
Query: 312 AIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITAR 371
+ +M+ER +P+ +P +G K ++L+ ++ +++GG +
Sbjct: 1054 WVDR------------YLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKN 1101
Query: 372 RQWKHIYDELGGNPG-STSAATCTRRHYERLILPYE-RFIKGEEDKP----------LPP 419
++W+ + L N G S+SAA+ ++ Y + + +E + +GEE P P
Sbjct: 1102 KKWRELATNL--NVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPK 1159
Query: 420 IKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKP 461
++P NS +T S E+P K A P
Sbjct: 1160 LQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTP 1201
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo
sapiens]
Length = 2178
Score = 53.5 bits (127), Expect = 1e-06
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%)
Query: 267 GVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSN-----EEKPKV-AIGEECRAD 320
G+ D + + K +K + + T P+ KK S+ E+ KV +G E +
Sbjct: 941 GLADMMSPGESKLPLPLKADGKEEGT-PQPESKSKKSSSSTTTGEKITKVYELGNE--PE 997
Query: 321 EQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 380
+ ++ +M+ER +P+ +P +G K ++L+ ++ +++GG + ++W+ +
Sbjct: 998 RKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATN 1057
Query: 381 LGGNPG-STSAATCTRRHYERLILPYE-RFIKGEEDKP----------LPPIKPRKQENS 428
L N G S+SAA+ ++ Y + + +E + +GEE P P ++P NS
Sbjct: 1058 L--NVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANS 1115
Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKP 461
+T S E+P K A P
Sbjct: 1116 GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTP 1148
>gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo
sapiens]
Length = 412
Score = 52.8 bits (125), Expect = 2e-06
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 306 EEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGY 365
EE+ K + + FL L+ +M++R TP+ R+P + + ++L+ +F+ GG
Sbjct: 101 EEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGL 160
Query: 366 ETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYE 406
+ R+ W+ + L TSAA R Y + + PYE
Sbjct: 161 VEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYE 201
>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
Length = 1544
Score = 52.4 bits (124), Expect = 3e-06
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383
FL + KY + + + + +IP++ K ++L+ + + + GG+ + R+W I ++G
Sbjct: 103 FLDQIAKYWELQGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGF 161
Query: 384 NPGSTSAATCTRRHYERLILPYERFIKGE--------------EDKPLPPIKPRKQENSS 429
PG + + R HYER++ PY F+ G+ +DK P Q S
Sbjct: 162 APGK-AVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKP-HDIPQRQSV 219
Query: 430 QENENKTKVSGTKRIKHEIPKSKKEKE--------NAPKPQDAAEVSSEQEKEQETLISQ 481
Q +E KR++ E K E E N + E EKE ++ I Q
Sbjct: 220 QPSETCPPARRAKRMRAEAMNIKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSSIKQ 279
Query: 482 KSI 484
+ I
Sbjct: 280 EPI 282
>gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive
domain 1B (RBP2-like), partial [Homo sapiens]
Length = 977
Score = 52.4 bits (124), Expect = 3e-06
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383
FL + KY + + + + +IP++ K ++L+ + + + GG+ + R+W I ++G
Sbjct: 103 FLDQIAKYWELQGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGF 161
Query: 384 NPGSTSAATCTRRHYERLILPYERFIKGE--------------EDKPLPPIKPRKQENSS 429
PG + + R HYER++ PY F+ G+ +DK P Q S
Sbjct: 162 APGK-AVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKP-HDIPQRQSV 219
Query: 430 QENENKTKVSGTKRIKHEIPKSKKEKE--------NAPKPQDAAEVSSEQEKEQETLISQ 481
Q +E KR++ E K E E N + E EKE ++ I Q
Sbjct: 220 QPSETCPPARRAKRMRAEAMNIKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSSIKQ 279
Query: 482 KSI 484
+ I
Sbjct: 280 EPI 282
>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
[Homo sapiens]
Length = 593
Score = 50.8 bits (120), Expect = 7e-06
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383
FL L+ +M++R TP+ RIP + + ++L+ ++ + GG + ++ W+ I L
Sbjct: 244 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNL 303
Query: 384 NPGSTSAATCTRRHYERLILPYE 406
TSAA R Y + + PYE
Sbjct: 304 PTSITSAAFTLRTQYMKYLYPYE 326
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 49.3 bits (116), Expect = 2e-05
Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 28/260 (10%)
Query: 416 PLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQ 475
PL K+ S +++ K S H++ K +E+ +D+ SS +E E+
Sbjct: 165 PLSAFSDPKKTKPSHGSKDANKESSKTSKPHKVTKEHRERPR----KDSESKSSSKELER 220
Query: 476 ETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGE 535
E S K L + K +E + P A+ +P+ K+ + +
Sbjct: 221 EQAKSSKDTSRKLGEGRLPK-----EEKAPPPKAAFKEPK------MALKETKLESTSPK 269
Query: 536 KGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASF 595
GP PP P P A K P + P PSA K SK +P + P+ +S
Sbjct: 270 GGPPPPPPPPPRASSKR----PATADSP--KPSAKKQKKSSSK--GSRSAPGTSPRTSSS 321
Query: 596 PSFPTTQPPLANQNETEDDKLPAMAD-YIANCTVKVDQLGSDD---IHNALKQTPKVLVV 651
SF + + P +++ T +K+ A ++ A ++V++ S+D + Q+
Sbjct: 322 SSF-SDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSS 380
Query: 652 QSFDMFKDKDLTGPMNENHG 671
S D D D N + G
Sbjct: 381 SSSDSSSDSDFEPSQNHSQG 400
>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
sapiens]
Length = 1690
Score = 49.3 bits (116), Expect = 2e-05
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383
FL L K+ + + + + +IP + K ++L+ + + GG+E +T ++W + LG
Sbjct: 90 FLDQLAKFWELQGSTL-KIPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGY 148
Query: 384 NPGSTSAATCTRRHYERLILPYERFIKG 411
PG + + HYER++ PYE F G
Sbjct: 149 LPGK-GTGSLLKSHYERILYPYELFQSG 175
>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
sapiens]
Length = 1641
Score = 49.3 bits (116), Expect = 2e-05
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383
FL L K+ + + + + +IP + K ++L+ + + GG+E +T ++W + LG
Sbjct: 90 FLDQLAKFWELQGSTL-KIPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGY 148
Query: 384 NPGSTSAATCTRRHYERLILPYERFIKG 411
PG + + HYER++ PYE F G
Sbjct: 149 LPGK-GTGSLLKSHYERILYPYELFQSG 175
>gi|5453638 AT rich interactive domain 3B [Homo sapiens]
Length = 560
Score = 49.3 bits (116), Expect = 2e-05
Identities = 26/87 (29%), Positives = 46/87 (52%)
Query: 320 DEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYD 379
+ + FL L+ +M++R TPI RIP + + ++L+ +++ + GG I ++ W+ I
Sbjct: 217 ERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITK 276
Query: 380 ELGGNPGSTSAATCTRRHYERLILPYE 406
L TSAA R Y + + YE
Sbjct: 277 GLNLPTSITSAAFTLRTQYMKYLYAYE 303
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 48.1 bits (113), Expect = 5e-05
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 341 RIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYER 400
+IP + + ++L+++ + + GGYE I R+W + L PG + + R HYER
Sbjct: 101 KIPNVERRILDLYSLSKIVVEEGGYEAICKDRRWARVAQRLNYPPGK-NIGSLLRSHYER 159
Query: 401 LILPYERFIKGEEDKPLPPIKPRKQENSSQENENK 435
++ PYE + G L R +N ++ E K
Sbjct: 160 IVYPYEMYQSGAN---LVQCNTRPFDNEEKDKEYK 191
>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
sapiens]
Length = 1539
Score = 48.1 bits (113), Expect = 5e-05
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 341 RIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYER 400
+IP + K ++L+++ + + GGYE I R+W + L PG + + R HYER
Sbjct: 101 KIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYPPGK-NIGSLLRSHYER 159
Query: 401 LILPYERFIKG 411
+I PYE F G
Sbjct: 160 IIYPYEMFQSG 170
>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
sapiens]
Length = 1570
Score = 48.1 bits (113), Expect = 5e-05
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 341 RIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYER 400
+IP + K ++L+++ + + GGYE I R+W + L PG + + R HYER
Sbjct: 101 KIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYPPGK-NIGSLLRSHYER 159
Query: 401 LILPYERFIKG 411
+I PYE F G
Sbjct: 160 IIYPYEMFQSG 170
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 47.8 bits (112), Expect = 6e-05
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 11/213 (5%)
Query: 403 LPYERFIKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQ 462
+P + +K + P + + +E + E K + K + K + K+ APKP+
Sbjct: 814 IPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPK 873
Query: 463 DAAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQ 522
+ EK +E+ + K A+ KKK+ ++ + + + D + +T+
Sbjct: 874 VEEKKEPAVEKPKESKVEAKK-----EEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEV 928
Query: 523 GSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCF 582
++K ++A K P+ P APEK A K+P P +K++ K
Sbjct: 929 ---AKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKA-KKPEEKPKTEAKAKEDDK--TL 982
Query: 583 TESPESEPQEASFPSFPTTQPPLANQNETEDDK 615
++ P E + S T Q + +DK
Sbjct: 983 SKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDK 1015
Score = 46.6 bits (109), Expect = 1e-04
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 20/211 (9%)
Query: 411 GEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSE 470
GEE+ PP +E +S E E K+ V + E +KE+ +P AEV S
Sbjct: 497 GEEETKSPP----AEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSP-----AEVKSP 547
Query: 471 QEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVA 530
++ + KS PE + K++ + E + A E+ + + EK
Sbjct: 548 EKAKSPAKEEAKSPPE--AKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 605
Query: 531 EEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEP 590
E+ +P +P+ K+ A P K P + S +K+E+K +SPE E
Sbjct: 606 SPVKEEAKSPAEAKSPV---KEEAKSPAEVKSPEKAKS---PTKEEAKSPEKAKSPEKE- 658
Query: 591 QEASFPSFPTTQPPLANQNETEDDKLPAMAD 621
EA P P A E K P A+
Sbjct: 659 -EAKSPE-KAKSPVKAEAKSPEKAKSPVKAE 687
Score = 46.6 bits (109), Expect = 1e-04
Identities = 51/219 (23%), Positives = 77/219 (35%), Gaps = 22/219 (10%)
Query: 410 KGEEDKPLPPIKPRKQENSSQENEN---KTKVSGTKRIKHEIPKSKKEKENAPKPQDAAE 466
K E P P K+E S E K + ++ K + K E A P
Sbjct: 643 KEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA 702
Query: 467 VSSEQEK---EQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQG 523
S E+ K ++E +K+ A +K + + AK PEK D
Sbjct: 703 KSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVK 762
Query: 524 SNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPL----TSPSALVDSKQESKL 579
S K + + P P +P K+ P +K PL +P + K+E K
Sbjct: 763 SPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVK- 821
Query: 580 CCFTESPESEPQEASFPSFPTTQPPLANQNETEDDKLPA 618
E +PQE +PP + E++K PA
Sbjct: 822 --SPVKEEEKPQEVK-----VKEPP----KKAEEEKAPA 849
Score = 45.8 bits (107), Expect = 2e-04
Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 17/169 (10%)
Query: 421 KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLIS 480
K K+ +E +T+V T+ + E K KE+E K ++ E + E+ET
Sbjct: 449 KSEKETVIVEEQTEETQV--TEEVTEEEEKEAKEEEG--KEEEGGEEEEAEGGEEET--- 501
Query: 481 QKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETD--QGSNSEKVAEEAGEKGP 538
P AA +K+ + + AK A PEK+ + + EK A E+
Sbjct: 502 --KSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK 559
Query: 539 TPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPE 587
+PP +PEK+ A P K P + S +K+E+K +SPE
Sbjct: 560 SPP---EAKSPEKEEAKSPAEVKSPEKAKS---PAKEEAKSPAEAKSPE 602
Score = 40.0 bits (92), Expect = 0.013
Identities = 59/264 (22%), Positives = 92/264 (34%), Gaps = 26/264 (9%)
Query: 409 IKGEEDKPLPPIKPRKQENSSQ---ENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAA 465
+K E P P K+E S ++ K K + K EKE A P A
Sbjct: 520 VKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSP---A 576
Query: 466 EVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSN 525
EV S ++ + KS E A +K + + AK A P K ++ +
Sbjct: 577 EVKSPEKAKSPAKEEAKSPAE----AKSPEKAKSPVKEEAKSPAEAKSPVK----EEAKS 628
Query: 526 SEKVAEEAGEKGPTPPLPSAP---LAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCF 582
+V K PT +P +PEK+ A P +K P+ + ++K K
Sbjct: 629 PAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKA-----EAKSPEKAKSP 683
Query: 583 TESPESEPQEASFP-SFPTTQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDDIHNA 641
++ P++A P P A E+ K P A K + +
Sbjct: 684 VKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEE 743
Query: 642 LKQTPKVLVVQSFDMFKDKDLTGP 665
K K +S + K D+ P
Sbjct: 744 AKSPEK---AKSPEKAKTLDVKSP 764
Score = 39.3 bits (90), Expect = 0.023
Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 9/198 (4%)
Query: 422 PRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQ 481
P K+E S E K + EIPK ++ K + + EV ++ ++
Sbjct: 788 PVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKA 847
Query: 482 KSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPP 541
+ P+ D KK+ +E + + +P + + ++K E +K PTP
Sbjct: 848 PATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPE 907
Query: 542 LPSAPLAPEKDSA----LVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPS 597
+ K+ A A K+P A SK K E +++ ++A P
Sbjct: 908 KEAPAKVEVKEDAKPKEKTEVAKKEP-DDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPE 966
Query: 598 FPTTQPPLANQNETEDDK 615
+ P EDDK
Sbjct: 967 ----EKPKTEAKAKEDDK 980
Score = 37.0 bits (84), Expect = 0.11
Identities = 58/228 (25%), Positives = 82/228 (35%), Gaps = 29/228 (12%)
Query: 412 EEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEI--PKSKKEKENAPKPQDAAEVSS 469
EE K K ++ S + E K+ +K E P K E A P S
Sbjct: 590 EEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSP 649
Query: 470 EQEK--EQETLISQKSIPEPLPA-ADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNS 526
E+ K E+E S + P+ A A +K + + AK P K+
Sbjct: 650 EKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAK 709
Query: 527 EKVAEEAG--EKGPTPPLPSAPLAPEKDSALVPGASKQP-------------LTSPSALV 571
V EEA EK +P A PEK + V +K P + SP A
Sbjct: 710 SPVKEEAKSPEKAKSPVKEEA-KTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKT 768
Query: 572 DSKQESKLCCFTESPESE-PQEASFP-SFPTTQPPLANQNETEDDKLP 617
+K+E++ SP + P++A P P A ED K P
Sbjct: 769 PAKEEAR------SPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAP 810
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 47.4 bits (111), Expect = 8e-05
Identities = 43/191 (22%), Positives = 73/191 (38%), Gaps = 12/191 (6%)
Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488
SQ+ E + + +P + +APKP AA S+Q +E TL ++ PL
Sbjct: 827 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPL 886
Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAG-EKGPTPPLPSAPL 547
P D +A P++ + + D + ++ G GP P + P
Sbjct: 887 PLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQ 946
Query: 548 APEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPPLAN 607
+ ++ PG T P A + ++ + P P+E + + PT P A
Sbjct: 947 TLQAEAGCAPG------TEPVATMAQQEVGEAL----GPRPAPEEKN-AALPTVPEPAAL 995
Query: 608 QNETEDDKLPA 618
+DD PA
Sbjct: 996 DQVQQDDPQPA 1006
Score = 35.8 bits (81), Expect = 0.25
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 22/146 (15%)
Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488
SQ+ E + + +P E +APKP AA + S+Q +E TL ++ PL
Sbjct: 627 SQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPL 686
Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP----- 543
P D + KP+A+ T +E+ + TPPLP
Sbjct: 687 PLQDTD------LSSAPKPVAA--------ATLVSQQAEEGLTLPQDSAMTPPLPLQDTD 732
Query: 544 --SAPLAPEKDSALVPGASKQPLTSP 567
SAP P + LV +++ LT P
Sbjct: 733 LSSAP-KPVAAATLVSQQAEEGLTLP 757
Score = 35.8 bits (81), Expect = 0.25
Identities = 49/201 (24%), Positives = 76/201 (37%), Gaps = 28/201 (13%)
Query: 380 ELGGNPGSTSAATCTRRHYER-LILPYERFIKG-----EEDKPLPPIKPRKQENSSQENE 433
EL P +AAT + E L LP + + + D P SQ+ E
Sbjct: 652 ELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 711
Query: 434 NKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPLPAADM 493
+ + +P + +APKP AA + S+Q +E TL ++ PLP D
Sbjct: 712 EGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDT 771
Query: 494 KKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP-------SAP 546
+ KP+A+ T +E+ + TPPLP SAP
Sbjct: 772 D------LSSAPKPVAA--------ATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAP 817
Query: 547 LAPEKDSALVPGASKQPLTSP 567
P + +V +++ LT P
Sbjct: 818 -KPVAAATIVSQQAEEGLTLP 837
Score = 35.4 bits (80), Expect = 0.33
Identities = 46/177 (25%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 448 IPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKP 507
+P + +APKP AA + S+Q +E TL + PLP D E S+ P
Sbjct: 606 LPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQD--------TELSSAP 657
Query: 508 LASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP-------SAPLAPEKDSALVPGAS 560
+ ++G + + TPPLP SAP P + LV +
Sbjct: 658 KPVAAATLVSQQAEEGLTLPQ------DSAMTPPLPLQDTDLSSAP-KPVAAATLVSQQA 710
Query: 561 KQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPPLANQNETEDDKLP 617
++ LT P DS L P + +S P P L +Q E LP
Sbjct: 711 EEGLTLPQ---DSAMTPPL------PLQDTDLSSAPK-PVAAATLVSQQAEEGLTLP 757
Score = 34.3 bits (77), Expect = 0.73
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 16/137 (11%)
Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488
SQ+ E + + +P + +APKP AA + S+Q +E TL ++ PL
Sbjct: 747 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPL 806
Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLPSAPLA 548
P D + KP+A+ T +E+ + TPPLP
Sbjct: 807 PLQDTD------LSSAPKPVAA--------ATIVSQQAEEGLTLPQDSAMTPPLPLQD-- 850
Query: 549 PEKDSALVPGASKQPLT 565
+ SA P A+ P++
Sbjct: 851 TDLSSAPKPVAAATPVS 867
>gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 47.4 bits (111), Expect = 8e-05
Identities = 43/191 (22%), Positives = 73/191 (38%), Gaps = 12/191 (6%)
Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488
SQ+ E + + +P + +APKP AA S+Q +E TL ++ PL
Sbjct: 827 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPL 886
Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAG-EKGPTPPLPSAPL 547
P D +A P++ + + D + ++ G GP P + P
Sbjct: 887 PLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQ 946
Query: 548 APEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPPLAN 607
+ ++ PG T P A + ++ + P P+E + + PT P A
Sbjct: 947 TLQAEAGCAPG------TEPVATMAQQEVGEAL----GPRPAPEEKN-AALPTVPEPAAL 995
Query: 608 QNETEDDKLPA 618
+DD PA
Sbjct: 996 DQVQQDDPQPA 1006
Score = 35.8 bits (81), Expect = 0.25
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 22/146 (15%)
Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488
SQ+ E + + +P E +APKP AA + S+Q +E TL ++ PL
Sbjct: 627 SQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPL 686
Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP----- 543
P D + KP+A+ T +E+ + TPPLP
Sbjct: 687 PLQDTD------LSSAPKPVAA--------ATLVSQQAEEGLTLPQDSAMTPPLPLQDTD 732
Query: 544 --SAPLAPEKDSALVPGASKQPLTSP 567
SAP P + LV +++ LT P
Sbjct: 733 LSSAP-KPVAAATLVSQQAEEGLTLP 757
Score = 35.8 bits (81), Expect = 0.25
Identities = 49/201 (24%), Positives = 76/201 (37%), Gaps = 28/201 (13%)
Query: 380 ELGGNPGSTSAATCTRRHYER-LILPYERFIKG-----EEDKPLPPIKPRKQENSSQENE 433
EL P +AAT + E L LP + + + D P SQ+ E
Sbjct: 652 ELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 711
Query: 434 NKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPLPAADM 493
+ + +P + +APKP AA + S+Q +E TL ++ PLP D
Sbjct: 712 EGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDT 771
Query: 494 KKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP-------SAP 546
+ KP+A+ T +E+ + TPPLP SAP
Sbjct: 772 D------LSSAPKPVAA--------ATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAP 817
Query: 547 LAPEKDSALVPGASKQPLTSP 567
P + +V +++ LT P
Sbjct: 818 -KPVAAATIVSQQAEEGLTLP 837
Score = 35.4 bits (80), Expect = 0.33
Identities = 46/177 (25%), Positives = 66/177 (37%), Gaps = 32/177 (18%)
Query: 448 IPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKP 507
+P + +APKP AA + S+Q +E TL + PLP D E S+ P
Sbjct: 606 LPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQD--------TELSSAP 657
Query: 508 LASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP-------SAPLAPEKDSALVPGAS 560
+ ++G + + TPPLP SAP P + LV +
Sbjct: 658 KPVAAATLVSQQAEEGLTLPQ------DSAMTPPLPLQDTDLSSAP-KPVAAATLVSQQA 710
Query: 561 KQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPPLANQNETEDDKLP 617
++ LT P DS L P + +S P P L +Q E LP
Sbjct: 711 EEGLTLPQ---DSAMTPPL------PLQDTDLSSAPK-PVAAATLVSQQAEEGLTLP 757
Score = 34.3 bits (77), Expect = 0.73
Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 16/137 (11%)
Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488
SQ+ E + + +P + +APKP AA + S+Q +E TL ++ PL
Sbjct: 747 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPL 806
Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLPSAPLA 548
P D + KP+A+ T +E+ + TPPLP
Sbjct: 807 PLQDTD------LSSAPKPVAA--------ATIVSQQAEEGLTLPQDSAMTPPLPLQD-- 850
Query: 549 PEKDSALVPGASKQPLT 565
+ SA P A+ P++
Sbjct: 851 TDLSSAPKPVAAATPVS 867
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 47.0 bits (110), Expect = 1e-04
Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 21/235 (8%)
Query: 404 PYERFIKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQD 463
P ++ +K + P K K +S ++ ++ + ++ K K + + PKP
Sbjct: 145 PVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPAR 204
Query: 464 AAEV-----SSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDN 518
AA ++ + S E AA KK + Q + P+ + P + +
Sbjct: 205 AAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKS 264
Query: 519 ETDQGSNSEKVAEEA----GEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSK 574
+ + S+S++ E+ + GP +P P AP +L K+ + + S+
Sbjct: 265 SSSEDSSSDEEEEQKKPMKNKPGPYSSVPP-PSAPPPKKSLGTQPPKKAVEKQQPVESSE 323
Query: 575 QESKLCCFTESPESEPQEASFPSFPTTQPPLA-----------NQNETEDDKLPA 618
S + E +P + S TT+PP A + + +EDD+ P+
Sbjct: 324 DSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPS 378
Score = 38.1 bits (87), Expect = 0.050
Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 16/130 (12%)
Query: 424 KQENSSQENENK-----TKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETL 478
++ +SS+E + K TK T + +P + + + D+ SSE+E+E+ +
Sbjct: 428 EESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSK 487
Query: 479 ISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGP 538
+ K P+ K+ G S A + E N + +SE+ EE KG
Sbjct: 488 SAVKKKPQ---------KVAGGAAPSKPASAKKGKAESSNSSSSDDSSEE--EEEKLKGK 536
Query: 539 TPPLPSAPLA 548
P P AP A
Sbjct: 537 GSPRPQAPKA 546
Score = 35.0 bits (79), Expect = 0.43
Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 23/185 (12%)
Query: 427 NSSQENENKTKVSGTKRI--KHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSI 484
+S E K + K + K + K+ + P + ++ S ++E+E K+
Sbjct: 226 SSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNK 285
Query: 485 PEPL-----PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGP- 538
P P P+A KK G Q P V+ ++ E+ + S+ E + EK P
Sbjct: 286 PGPYSSVPPPSAPPPKKSLGTQ-----PPKKAVEKQQPVESSEDSSDESDSSSEEEKKPP 340
Query: 539 --------TPPLPSAPLAPEKDSALVPGASKQPLTSPS--ALVDSKQESKLCCFTESPES 588
T P A A E S S + +PS A +K T+SP
Sbjct: 341 TKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAV 400
Query: 589 EPQEA 593
+P A
Sbjct: 401 KPAAA 405
Score = 31.2 bits (69), Expect = 6.1
Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 14/149 (9%)
Query: 401 LILPYERFIKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPK 460
L LP ++ +G D +SS+E E KT S K+ ++ + A
Sbjct: 455 LSLPAKQAPQGSRDS-----SSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASA 509
Query: 461 PQDAAEVSS-----EQEKEQETLISQKSIPEP-LPAADMKKKIEGYQEFSAKPLASRVDP 514
+ AE S+ + +E+E + K P P P A+ + +AK +
Sbjct: 510 KKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEE 569
Query: 515 EKDNE---TDQGSNSEKVAEEAGEKGPTP 540
+K + GS ++ EA ++ TP
Sbjct: 570 KKKAAVVVSKSGSLKKRKQNEAAKEAETP 598
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 46.6 bits (109), Expect = 1e-04
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 485 PEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLPS 544
P P P ++K G + A+ V PEK D+G +K + G K P L
Sbjct: 58 PPPEPTPRVRKAQAGGKPGKRPGTAAEVPPEKTK--DKGKKGKK---DKGPKVPKESLEG 112
Query: 545 APLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPP 604
+P P+K P A+K+P P K + K T+ P+ +P +A+ +PP
Sbjct: 113 SPRPPKKGKEKPPKATKKPKEKPPK-ATKKPKEKPPKATKKPKEKPPKATKKPPSGKRPP 171
Query: 605 LANQNETEDDKLP 617
+ +ET + LP
Sbjct: 172 ILAPSETLEWPLP 184
Score = 35.4 bits (80), Expect = 0.33
Identities = 56/236 (23%), Positives = 86/236 (36%), Gaps = 39/236 (16%)
Query: 413 EDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPK-SKKEKENAPKPQDAAEVSSEQ 471
E P PP K +++ + + + TK+ K + PK +KK KE PK A
Sbjct: 111 EGSPRPPKKGKEKPPKATKKPKEKPPKATKKPKEKPPKATKKPKEKPPK----ATKKPPS 166
Query: 472 EKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPL--------------ASRVDPEKD 517
K L +++ PLP E QE A PL A PE +
Sbjct: 167 GKRPPILAPSETLEWPLPPPPSPGPEELPQEGGA-PLSNNWQNPGEETHVEAREHQPEPE 225
Query: 518 NETDQGS--NSEKVAEEAGE--------KGPTPPLPSAPLAPEKDSALVPGASKQPLTSP 567
ET+Q + ++++ E E K P PP PS PE+ P K P +P
Sbjct: 226 EETEQPTLDYNDQIEREDYEDFEYIRRQKQPRPP-PSRRRRPERVWP-EPPEEKAPAPAP 283
Query: 568 SALVDSKQESKLCCFTES-------PESEPQEASFPSFPTTQPPLANQNETEDDKL 616
++ + L P + + F P +P Q + E ++L
Sbjct: 284 EERIEPPVKPLLPPLPPDYGDGYVIPNYDDMDYYFGPPPPQKPDAERQTDEEKEEL 339
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 46.6 bits (109), Expect = 1e-04
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 32/226 (14%)
Query: 421 KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVS--------SEQE 472
K RK + + +++ K+K KR + P K + + D+A S S
Sbjct: 225 KKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAA 284
Query: 473 KEQETLISQKSIPEPL-------------PAADMKKKIEGYQEFSAKPLASRVDPEKDNE 519
K T ++ +S P P P ++ + + +P + D +KD +
Sbjct: 285 KTHTTALAGRS-PSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKK 343
Query: 520 TDQGSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGA----SKQPLTSPSALVDSKQ 575
++ + + E GP PP P+ LA + P A S++P+ PS ++
Sbjct: 344 -EKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRD 402
Query: 576 ESKLCCFTESPESEPQEASFPSF-PTTQPPLANQNETEDDKLPAMA 620
S +SPE PQ +S S P+ QP +++ + + P A
Sbjct: 403 RSP----PKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPA 444
Score = 42.7 bits (99), Expect = 0.002
Identities = 35/186 (18%), Positives = 70/186 (37%), Gaps = 10/186 (5%)
Query: 417 LPPIKPRKQENSSQENENKTKVSGTKRIKHEIP---KSKKEKENAP-KPQDAAEVSSEQE 472
L P K R+ +SS + + + S + S E + P +P+ A +
Sbjct: 2524 LQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPT 2583
Query: 473 KEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEE 532
+ + + PEP PA ++ S+ +S + + S+S +
Sbjct: 2584 PAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2643
Query: 533 AGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFT------ESP 586
+ P+P P P+ S P ++ SP +DS ++S+ ++ SP
Sbjct: 2644 SSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSP 2703
Query: 587 ESEPQE 592
+ P++
Sbjct: 2704 QPSPRD 2709
Score = 37.7 bits (86), Expect = 0.066
Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 11/169 (6%)
Query: 423 RKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQK 482
R + SS E +NK++ S + + P+ KK + ++ + + +SS + K + L ++
Sbjct: 721 RGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRS---LSSPRSKAKSRLSLRR 777
Query: 483 SIPEPLPAADMKKKI--EGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540
S+ P K + + S++P A P + + + ++ ++ + +
Sbjct: 778 SLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSS 837
Query: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESE 589
P P+ S P +TSP A S + CF SP+ E
Sbjct: 838 SSPH----PKVKSGTPPRQGS--ITSPQANEQSVTPQRRSCFESSPDPE 880
Score = 36.6 bits (83), Expect = 0.15
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 8/127 (6%)
Query: 415 KPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKE 474
K P++ R + SS E ++K+++S + P+ K + AP+ Q ++ S E +
Sbjct: 1568 KTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAP 1627
Query: 475 QETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAG 534
+ +++P + K E S+ +S P K +GS S + E
Sbjct: 1628 -----APRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRS---SPEPK 1679
Query: 535 EKGPTPP 541
K TPP
Sbjct: 1680 TKSRTPP 1686
Score = 31.2 bits (69), Expect = 6.1
Identities = 46/189 (24%), Positives = 67/189 (35%), Gaps = 13/189 (6%)
Query: 413 EDKPLPPI-KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQ 471
E K LP +PR + SS E NK +R E +K P Q + SS Q
Sbjct: 1485 EPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSS-Q 1543
Query: 472 EKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAE 531
E + + S + E + D K K + PL R E D S +++
Sbjct: 1544 ELDVKPSASPQERSESDSSPDSKAK-------TRTPLRQRSRSGSSPEVDSKS---RLSP 1593
Query: 532 EAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALV-DSKQESKLCCFTESPESEP 590
G +P + P A + + + + +P AL S+ S SPE
Sbjct: 1594 RRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSS 1653
Query: 591 QEASFPSFP 599
S P P
Sbjct: 1654 STESSPEHP 1662
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 45.8 bits (107), Expect = 2e-04
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 12/197 (6%)
Query: 426 ENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKS-- 483
E + E+E I E+ S KE+ K + A E E E E+E + ++KS
Sbjct: 458 EETKVEDEKSEMEEALTAITEELAVSMKEE----KKEAAEEKEEEPEAEEEEVAAKKSPV 513
Query: 484 ---IPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540
PE K++ EG +E + ++ D ++ +++ +SEK E E+G T
Sbjct: 514 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEK-EEGEQEEGETE 572
Query: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT 600
A K+ V S++ T + D+K E + P+S +E P
Sbjct: 573 AEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKG--KSPV 630
Query: 601 TQPPLANQNETEDDKLP 617
+ P+ + ++ K P
Sbjct: 631 PKSPVEEKGKSPVPKSP 647
Score = 38.5 bits (88), Expect = 0.038
Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 409 IKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVS 468
++ + P+P + ++ ++ + + K K +K E PK +K ++ KP+D E
Sbjct: 674 VEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVK-EAPKEEKVEKKEEKPKDVPE-- 730
Query: 469 SEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQG-SNSE 527
+K+ E+ + ++++ E + K ++ + E K + EK+ E G SE
Sbjct: 731 ---KKKAESPVKEEAVAE---VVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSE 784
Query: 528 KVAEEAGEKG 537
+ + G KG
Sbjct: 785 EEGSDKGAKG 794
Score = 35.4 bits (80), Expect = 0.33
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 410 KGEEDKPLPPIKPRKQE---NSSQENENKTKVSGT---KRIKHEIPKSKKEKENAPKPQD 463
KG+ P P++ + + S E + K+ VS + ++ K +PKS E+ +
Sbjct: 638 KGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSK---- 693
Query: 464 AAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLA-SRVDPEKDNETDQ 522
AEV ++KE+E +K + E ++KK E ++ K A S V E E
Sbjct: 694 -AEVGKGEQKEEE----EKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVT 748
Query: 523 GSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCF 582
+ S KV E K PL EK+ A G S++ + A K++ +
Sbjct: 749 ITKSVKVHLEKETKEEGKPLQQ---EKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGE 805
Query: 583 TESPESEPQE 592
E E QE
Sbjct: 806 VEGKEEVEQE 815
Score = 32.0 bits (71), Expect = 3.6
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 26/184 (14%)
Query: 424 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKS 483
K+E QE E + G K + E S+KE + + + E +E E E
Sbjct: 527 KEEEEGQEEEEEED-EGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAE--------- 576
Query: 484 IPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP 543
E A + KK E +E + K + + E + + S EKG + P+P
Sbjct: 577 -GEEAEAKEEKKVEEKSEEVATK---EELVADAKVEKPEKAKSPVPKSPVEEKGKS-PVP 631
Query: 544 SAPLAPEKDSALVPGA-----SKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSF 598
+P+ EK + VP + K P+ P + V+ K +S + ++SP E ++ P
Sbjct: 632 KSPV-EEKGKSPVPKSPVEEKGKSPV--PKSPVEEKGKSPV---SKSPVEEKAKSPVPKS 685
Query: 599 PTTQ 602
P +
Sbjct: 686 PVEE 689
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 45.8 bits (107), Expect = 2e-04
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 12/197 (6%)
Query: 426 ENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKS-- 483
E + E+E I E+ S KE+ K + A E E E E+E + ++KS
Sbjct: 82 EETKVEDEKSEMEEALTAITEELAVSMKEE----KKEAAEEKEEEPEAEEEEVAAKKSPV 137
Query: 484 ---IPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540
PE K++ EG +E + ++ D ++ +++ +SEK E E+G T
Sbjct: 138 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEK-EEGEQEEGETE 196
Query: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT 600
A K+ V S++ T + D+K E + P+S +E P
Sbjct: 197 AEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKG--KSPV 254
Query: 601 TQPPLANQNETEDDKLP 617
+ P+ + ++ K P
Sbjct: 255 PKSPVEEKGKSPVPKSP 271
Score = 38.5 bits (88), Expect = 0.038
Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 10/130 (7%)
Query: 409 IKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVS 468
++ + P+P + ++ ++ + + K K +K E PK +K ++ KP+D E
Sbjct: 298 VEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVK-EAPKEEKVEKKEEKPKDVPE-- 354
Query: 469 SEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQG-SNSE 527
+K+ E+ + ++++ E + K ++ + E K + EK+ E G SE
Sbjct: 355 ---KKKAESPVKEEAVAE---VVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSE 408
Query: 528 KVAEEAGEKG 537
+ + G KG
Sbjct: 409 EEGSDKGAKG 418
Score = 35.4 bits (80), Expect = 0.33
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 19/190 (10%)
Query: 410 KGEEDKPLPPIKPRKQE---NSSQENENKTKVSGT---KRIKHEIPKSKKEKENAPKPQD 463
KG+ P P++ + + S E + K+ VS + ++ K +PKS E+ +
Sbjct: 262 KGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSK---- 317
Query: 464 AAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLA-SRVDPEKDNETDQ 522
AEV ++KE+E +K + E ++KK E ++ K A S V E E
Sbjct: 318 -AEVGKGEQKEEE----EKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVT 372
Query: 523 GSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCF 582
+ S KV E K PL EK+ A G S++ + A K++ +
Sbjct: 373 ITKSVKVHLEKETKEEGKPLQQ---EKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGE 429
Query: 583 TESPESEPQE 592
E E QE
Sbjct: 430 VEGKEEVEQE 439
Score = 32.0 bits (71), Expect = 3.6
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 26/184 (14%)
Query: 424 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKS 483
K+E QE E + G K + E S+KE + + + E +E E E
Sbjct: 151 KEEEEGQEEEEEED-EGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAE--------- 200
Query: 484 IPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP 543
E A + KK E +E + K + + E + + S EKG + P+P
Sbjct: 201 -GEEAEAKEEKKVEEKSEEVATK---EELVADAKVEKPEKAKSPVPKSPVEEKGKS-PVP 255
Query: 544 SAPLAPEKDSALVPGA-----SKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSF 598
+P+ EK + VP + K P+ P + V+ K +S + ++SP E ++ P
Sbjct: 256 KSPV-EEKGKSPVPKSPVEEKGKSPV--PKSPVEEKGKSPV---SKSPVEEKAKSPVPKS 309
Query: 599 PTTQ 602
P +
Sbjct: 310 PVEE 313
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,775,664
Number of Sequences: 37866
Number of extensions: 2676695
Number of successful extensions: 12550
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 559
Number of HSP's that attempted gapping in prelim test: 10559
Number of HSP's gapped (non-prelim): 2198
length of query: 1188
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1075
effective length of database: 13,968,660
effective search space: 15016309500
effective search space used: 15016309500
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.