BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo sapiens] (1188 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo sapi... 2413 0.0 gi|47078224 AT rich interactive domain 5A [Homo sapiens] 192 1e-48 gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 93 2e-18 gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 92 4e-18 gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo ... 79 3e-14 gi|115334673 retinoblastoma-binding protein 1 isoform II [Homo s... 79 3e-14 gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo sa... 79 3e-14 gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ... 60 9e-09 gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 54 1e-06 gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 54 1e-06 gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 54 1e-06 gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo s... 53 2e-06 gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens] 52 3e-06 gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive ... 52 3e-06 gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 51 7e-06 gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 49 2e-05 gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 49 2e-05 gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa... 49 2e-05 gi|5453638 AT rich interactive domain 3B [Homo sapiens] 49 2e-05 gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 48 5e-05 gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho... 48 5e-05 gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H... 48 5e-05 gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 48 6e-05 gi|226437579 NAC alpha domain containing [Homo sapiens] 47 8e-05 gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 47 8e-05 gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 47 1e-04 gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 47 1e-04 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 47 1e-04 gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 46 2e-04 gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 46 2e-04 >gi|74136549 AT rich interactive domain 5B (MRF1-like) [Homo sapiens] Length = 1188 Score = 2413 bits (6253), Expect = 0.0 Identities = 1188/1188 (100%), Positives = 1188/1188 (100%) Query: 1 MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL 60 MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL Sbjct: 1 MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL 60 Query: 61 WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKW 120 WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKW Sbjct: 61 WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKW 120 Query: 121 RCGFHAGPVKTEALGRNGQKEALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS 180 RCGFHAGPVKTEALGRNGQKEALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS Sbjct: 121 RCGFHAGPVKTEALGRNGQKEALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS 180 Query: 181 YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESI 240 YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESI Sbjct: 181 YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESI 240 Query: 241 CDEFAPNLKGRPRKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNC 300 CDEFAPNLKGRPRKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNC Sbjct: 241 CDEFAPNLKGRPRKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNC 300 Query: 301 KKVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQ 360 KKVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQ Sbjct: 301 KKVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQ 360 Query: 361 KLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPI 420 KLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPI Sbjct: 361 KLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPI 420 Query: 421 KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLIS 480 KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLIS Sbjct: 421 KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLIS 480 Query: 481 QKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540 QKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP Sbjct: 481 QKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540 Query: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT 600 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT Sbjct: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT 600 Query: 601 TQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDK 660 TQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDK Sbjct: 601 TQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDK 660 Query: 661 DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK 720 DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK Sbjct: 661 DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK 720 Query: 721 KLIARDDLCSSLSQTHHGQSTDHMAVSRPSVIQHVQSFRSKPSEERKTINDIFKHEKLSR 780 KLIARDDLCSSLSQTHHGQSTDHMAVSRPSVIQHVQSFRSKPSEERKTINDIFKHEKLSR Sbjct: 721 KLIARDDLCSSLSQTHHGQSTDHMAVSRPSVIQHVQSFRSKPSEERKTINDIFKHEKLSR 780 Query: 781 SDPHRCSFSKHHLNPLADSYVLKQEIQEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSL 840 SDPHRCSFSKHHLNPLADSYVLKQEIQEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSL Sbjct: 781 SDPHRCSFSKHHLNPLADSYVLKQEIQEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSL 840 Query: 841 YRHTEHHLHNEQTSKYPSRDMYRESENSSFPSHRHQEKLHVNYLTSLHLQDKKSAAAEAP 900 YRHTEHHLHNEQTSKYPSRDMYRESENSSFPSHRHQEKLHVNYLTSLHLQDKKSAAAEAP Sbjct: 841 YRHTEHHLHNEQTSKYPSRDMYRESENSSFPSHRHQEKLHVNYLTSLHLQDKKSAAAEAP 900 Query: 901 TDDQPTDLSLPKNPHKPTGKVLGLAHSTTGPQESKGISQFQVLGSQSRDCHPKACRVSPM 960 TDDQPTDLSLPKNPHKPTGKVLGLAHSTTGPQESKGISQFQVLGSQSRDCHPKACRVSPM Sbjct: 901 TDDQPTDLSLPKNPHKPTGKVLGLAHSTTGPQESKGISQFQVLGSQSRDCHPKACRVSPM 960 Query: 961 TMSGPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLD 1020 TMSGPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLD Sbjct: 961 TMSGPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLD 1020 Query: 1021 LVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLPLSSPIFPG 1080 LVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLPLSSPIFPG Sbjct: 1021 LVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLPLSSPIFPG 1080 Query: 1081 LYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQL 1140 LYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQL Sbjct: 1081 LYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQL 1140 Query: 1141 YRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL 1188 YRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL Sbjct: 1141 YRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL 1188 >gi|47078224 AT rich interactive domain 5A [Homo sapiens] Length = 594 Score = 192 bits (489), Expect = 1e-48 Identities = 101/200 (50%), Positives = 129/200 (64%), Gaps = 11/200 (5%) Query: 295 KNNHNCKKVSNEEKPKVA---IGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQIN 351 K N +S E+ P+ E+ R +EQAFLV+LYK+MKER TPIER+P+LGFKQIN Sbjct: 29 KQNGIQNPISLEDSPEAGGEREEEQEREEEQAFLVSLYKFMKERHTPIERVPHLGFKQIN 88 Query: 352 LWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKG 411 LW +++A +KLG YE +T RR WK++YDELGG+PGSTSAATCTRRHYERL+LPY R +KG Sbjct: 89 LWKIYKAVEKLGAYELVTGRRLWKNVYDELGGSPGSTSAATCTRRHYERLVLPYVRHLKG 148 Query: 412 EEDKPLPPIKPRKQENSSQEN-------ENKTKVSGTKRIKHEIPKSKKEKENAPKPQDA 464 E+DKPLP KPRKQ ++EN E K +R+ +P K P P + Sbjct: 149 EDDKPLPTSKPRKQYKMAKENRGDDGATERPKKAKEERRMDQMMPGKTKADAADPAPLPS 208 Query: 465 AEVSSEQEKEQETLISQKSI 484 E EQ+ L S S+ Sbjct: 209 QE-PPRNSTEQQGLASGSSV 227 Score = 36.6 bits (83), Expect = 0.15 Identities = 17/22 (77%), Positives = 19/22 (86%) Query: 679 YSRGNPGIMSPLAKKKLLSQVS 700 Y +G GIMSPLAKKKLL+QVS Sbjct: 247 YCKGTHGIMSPLAKKKLLAQVS 268 Score = 32.0 bits (71), Expect = 3.6 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 21/108 (19%) Query: 1013 KRSLEDLDLVIAGKKARAVSPLDPSKEVSGKEKASEQESEGSKAAHGGHSGGGSEGHKLP 1072 KRSLE+ +GK+ RAVSP KE K+ ++ G + G P Sbjct: 444 KRSLEEEGAAHSGKRLRAVSPF--LKEADAKKCGAKPAGSGLVSCLLG-----------P 490 Query: 1073 LSSPIFPGLYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVL--SPLMQP 1118 P+ P Y G++ + LN ++ + LK Q L SPL+ P Sbjct: 491 ALGPVPPEAYRGTMLHCPLN------FTGTPGPLKGQAALPFSPLVIP 532 >gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] Length = 1312 Score = 92.8 bits (229), Expect = 2e-18 Identities = 126/599 (21%), Positives = 247/599 (41%), Gaps = 50/599 (8%) Query: 304 SNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLG 363 S+EE+ ++ E + + FL LYK+M++R TPI + P LG++ +NL+ +F+ KLG Sbjct: 295 SSEEEEEI---EPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLG 351 Query: 364 GYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPIKPR 423 G++ I + WK +Y +LG +++A + Y++ + +E + + + + + Sbjct: 352 GFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEK 411 Query: 424 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQE---TLIS 480 +E EN ++ + + EI + K E+E P++ + E E+++ +L S Sbjct: 412 VVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPSLGS 471 Query: 481 QKSIPEPLPA-ADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPT 539 +K++ E +P +D +K++ KP + +KD++T + S + EA E+ Sbjct: 472 KKNLLESIPTHSDQEKEVN-----IKKPEDNENLDDKDDDTTRVDESLNIKVEAEEEKAK 526 Query: 540 PPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFP 599 + E D ++ D+ +E + C+ + + + + Sbjct: 527 SGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNEEEEFECYPPGMKVQVRYGRGKNQK 586 Query: 600 TTQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDD--IHNALKQTPKV----LVVQS 653 + + ++ E ++ + Y V+ D+ D + A K PK+ + Sbjct: 587 MYEASI-KDSDVEGGEVLYLVHY-CGWNVRYDEWIKADKIVRPADKNVPKIKHRKKIKNK 644 Query: 654 FDMFKDKD-LTGPMNENHGLNYTPLLYSRGNPGIMSPL----AKKKLLSQVSGASLSSSY 708 D KDKD P N P + +P ++S L AK + + ++S Sbjct: 645 LDKEKDKDEKYSPKNCKLRRLSKPPFQTNPSPEMVSKLDLTDAKNSDTAHIKSIEITSI- 703 Query: 709 PYGSPPPLISKKKLIARDDLCSSLSQTHHGQ---STDHMAVSRPSVIQHVQSFRSKPSEE 765 S + ++D + ++G+ DH+ +R +I + S EE Sbjct: 704 -LNGLQASESSAEDSEQEDERGAQDMDNNGKEESKIDHLTNNRNDLISKEEQNSSSLLEE 762 Query: 766 RKTINDIFKHEKLSRSDPHRCSFSKHHLNPLADSYVLKQEIQEGKDKLLEKRALPHSHMP 825 K D+ + +S+S P R D VL ++ +D++ +KR + Sbjct: 763 NKVHADLVISKPVSKS-PERLR---------KDIEVLSEDTDYEEDEVTKKR----KDVK 808 Query: 826 SFLADFYSSPHL---HSLYRHTEHHLHNEQTSKYPSRDMYRES---ENSSFPSHRHQEK 878 D S P + Y +TE L K + +ES ENSS S E+ Sbjct: 809 KDTTDKSSKPQIKRGKRRYCNTEECLKTGSPGKKEEKAKNKESLCMENSSNSSSDEDEE 867 >gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] Length = 1226 Score = 91.7 bits (226), Expect = 4e-18 Identities = 60/237 (25%), Positives = 123/237 (51%), Gaps = 12/237 (5%) Query: 304 SNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLG 363 S+EE+ ++ E + + FL LYK+M++R TPI + P LG++ +NL+ +F+ KLG Sbjct: 295 SSEEEEEI---EPFPEERENFLQQLYKFMEDRGTPINKRPVLGYRNLNLFKLFRLVHKLG 351 Query: 364 GYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPIKPR 423 G++ I + WK +Y +LG +++A + Y++ + +E + + + + + Sbjct: 352 GFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYGFEEYCRSANIEFQMALPEK 411 Query: 424 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQE---TLIS 480 +E EN ++ + + EI + K E+E P++ + E E+++ +L S Sbjct: 412 VVNKQCKECENVKEIKVKEENETEIKEIKMEEERNIIPREEKPIEDEIERKENIKPSLGS 471 Query: 481 QKSIPEPLPA-ADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEK 536 +K++ E +P +D +K++ KP + +KD++T + S + EA E+ Sbjct: 472 KKNLLESIPTHSDQEKEVN-----IKKPEDNENLDDKDDDTTRVDESLNIKVEAEEE 523 >gi|115334679 retinoblastoma-binding protein 1 isoform III [Homo sapiens] Length = 1188 Score = 78.6 bits (192), Expect = 3e-14 Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 63/284 (22%) Query: 302 KVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQK 361 K + EE P+ + E R + FL LYK+M++R TPI + P LG+K +NL+ +F+ Sbjct: 296 KKTEEEVPEEELDPEERDN---FLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYH 352 Query: 362 LGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERF------------- 408 GG + I + WK IY +LG +++A+ + Y + + +E + Sbjct: 353 QGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHH 412 Query: 409 -------------------IKGEEDKPLPPIKPRKQENSSQENENKTK------VSGTKR 443 +K +++ PL +K +EN +E++ + G +R Sbjct: 413 HEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRR 472 Query: 444 IKHEIPKSKKE----------KENAPKPQDA-AEVSSEQEKEQETLISQKSIPEPLPAAD 492 I ++ KKE K+N + +D + + ++KE E L+ +K+ P+ Sbjct: 473 IARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPK-----Q 527 Query: 493 MKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEK 536 +KKI+ ++ + + E++ ++ + +E + GE+ Sbjct: 528 KEKKIKKQED------SDKDSDEEEEKSQEREETESKCDSEGEE 565 >gi|115334673 retinoblastoma-binding protein 1 isoform II [Homo sapiens] Length = 1203 Score = 78.6 bits (192), Expect = 3e-14 Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 63/284 (22%) Query: 302 KVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQK 361 K + EE P+ + E R + FL LYK+M++R TPI + P LG+K +NL+ +F+ Sbjct: 296 KKTEEEVPEEELDPEERDN---FLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYH 352 Query: 362 LGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERF------------- 408 GG + I + WK IY +LG +++A+ + Y + + +E + Sbjct: 353 QGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHH 412 Query: 409 -------------------IKGEEDKPLPPIKPRKQENSSQENENKTK------VSGTKR 443 +K +++ PL +K +EN +E++ + G +R Sbjct: 413 HEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRR 472 Query: 444 IKHEIPKSKKE----------KENAPKPQDA-AEVSSEQEKEQETLISQKSIPEPLPAAD 492 I ++ KKE K+N + +D + + ++KE E L+ +K+ P+ Sbjct: 473 IARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPK-----Q 527 Query: 493 MKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEK 536 +KKI+ ++ + + E++ ++ + +E + GE+ Sbjct: 528 KEKKIKKQED------SDKDSDEEEEKSQEREETESKCDSEGEE 565 >gi|115334677 retinoblastoma-binding protein 1 isoform I [Homo sapiens] Length = 1257 Score = 78.6 bits (192), Expect = 3e-14 Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 63/284 (22%) Query: 302 KVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQK 361 K + EE P+ + E R + FL LYK+M++R TPI + P LG+K +NL+ +F+ Sbjct: 296 KKTEEEVPEEELDPEERDN---FLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYH 352 Query: 362 LGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERF------------- 408 GG + I + WK IY +LG +++A+ + Y + + +E + Sbjct: 353 QGGCDNIDSGAVWKQIYMDLGIPILNSAASYNVKTAYRKYLYGFEEYCRSANIQFRTVHH 412 Query: 409 -------------------IKGEEDKPLPPIKPRKQENSSQENENKTK------VSGTKR 443 +K +++ PL +K +EN +E++ + G +R Sbjct: 413 HEPKVKEEKKDLEESMEEALKLDQEMPLTEVKSEPEENIDSNSESEREEIELKSPRGRRR 472 Query: 444 IKHEIPKSKKE----------KENAPKPQDA-AEVSSEQEKEQETLISQKSIPEPLPAAD 492 I ++ KKE K+N + +D + + ++KE E L+ +K+ P+ Sbjct: 473 IARDVNSIKKEIEEEKTEDKLKDNDTENKDVDDDYETAEKKENELLLGRKNTPK-----Q 527 Query: 493 MKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEK 536 +KKI+ ++ + + E++ ++ + +E + GE+ Sbjct: 528 KEKKIKKQED------SDKDSDEEEEKSQEREETESKCDSEGEE 565 >gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo sapiens] Length = 1835 Score = 60.5 bits (145), Expect = 9e-09 Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 1/104 (0%) Query: 323 AFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELG 382 AFL L ++ R +P ++IP +G K+++L ++ LGG+ ++ + QW I +E Sbjct: 18 AFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFN 77 Query: 383 GNPGSTSAATCTRRHYERLILPYERFIK-GEEDKPLPPIKPRKQ 425 ++AA +++Y R + YE+ GE+D +PP P+ Q Sbjct: 78 FPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKPQ 121 >gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 [Homo sapiens] Length = 2191 Score = 53.5 bits (127), Expect = 1e-06 Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%) Query: 267 GVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSN-----EEKPKV-AIGEECRAD 320 G+ D + + K +K + + T P+ KK S+ E+ KV +G E + Sbjct: 954 GLADMMSPGESKLPLPLKADGKEEGT-PQPESKSKKSSSSTTTGEKITKVYELGNE--PE 1010 Query: 321 EQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 380 + ++ +M+ER +P+ +P +G K ++L+ ++ +++GG + ++W+ + Sbjct: 1011 RKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATN 1070 Query: 381 LGGNPG-STSAATCTRRHYERLILPYE-RFIKGEEDKP----------LPPIKPRKQENS 428 L N G S+SAA+ ++ Y + + +E + +GEE P P ++P NS Sbjct: 1071 L--NVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANS 1128 Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKP 461 +T S E+P K A P Sbjct: 1129 GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTP 1161 >gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 [Homo sapiens] Length = 2231 Score = 53.5 bits (127), Expect = 1e-06 Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 26/222 (11%) Query: 252 PRKKKPCPQRRDSFSGVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSNEEKPKV 311 P P SF G + + +S G ++ S+ T + ++ NE + K+ Sbjct: 994 PSPMSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKL 1053 Query: 312 AIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITAR 371 + +M+ER +P+ +P +G K ++L+ ++ +++GG + Sbjct: 1054 WVDR------------YLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKN 1101 Query: 372 RQWKHIYDELGGNPG-STSAATCTRRHYERLILPYE-RFIKGEEDKP----------LPP 419 ++W+ + L N G S+SAA+ ++ Y + + +E + +GEE P P Sbjct: 1102 KKWRELATNL--NVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPK 1159 Query: 420 IKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKP 461 ++P NS +T S E+P K A P Sbjct: 1160 LQPPSPANSGSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTP 1201 >gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 [Homo sapiens] Length = 2178 Score = 53.5 bits (127), Expect = 1e-06 Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 23/213 (10%) Query: 267 GVKDSNNNSDGKAVAKVKCEARSALTKPKNNHNCKKVSN-----EEKPKV-AIGEECRAD 320 G+ D + + K +K + + T P+ KK S+ E+ KV +G E + Sbjct: 941 GLADMMSPGESKLPLPLKADGKEEGT-PQPESKSKKSSSSTTTGEKITKVYELGNE--PE 997 Query: 321 EQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDE 380 + ++ +M+ER +P+ +P +G K ++L+ ++ +++GG + ++W+ + Sbjct: 998 RKLWVDRYLTFMEERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATN 1057 Query: 381 LGGNPG-STSAATCTRRHYERLILPYE-RFIKGEEDKP----------LPPIKPRKQENS 428 L N G S+SAA+ ++ Y + + +E + +GEE P P ++P NS Sbjct: 1058 L--NVGTSSSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKLQPPSPANS 1115 Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKP 461 +T S E+P K A P Sbjct: 1116 GSLQGPQTPQSTGSNSMAEVPGDLKPPTPASTP 1148 >gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo sapiens] Length = 412 Score = 52.8 bits (125), Expect = 2e-06 Identities = 28/101 (27%), Positives = 50/101 (49%) Query: 306 EEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGY 365 EE+ K + + FL L+ +M++R TP+ R+P + + ++L+ +F+ GG Sbjct: 101 EEQFKQLYELDADPKRKEFLDDLFSFMQKRGTPVNRVPIMAKQVLDLYALFRLVTAKGGL 160 Query: 366 ETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYE 406 + R+ W+ + L TSAA R Y + + PYE Sbjct: 161 VEVINRKVWREVTRGLSLPTTITSAAFTLRTQYMKYLYPYE 201 >gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens] Length = 1544 Score = 52.4 bits (124), Expect = 3e-06 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 25/183 (13%) Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383 FL + KY + + + + +IP++ K ++L+ + + + GG+ + R+W I ++G Sbjct: 103 FLDQIAKYWELQGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGF 161 Query: 384 NPGSTSAATCTRRHYERLILPYERFIKGE--------------EDKPLPPIKPRKQENSS 429 PG + + R HYER++ PY F+ G+ +DK P Q S Sbjct: 162 APGK-AVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKP-HDIPQRQSV 219 Query: 430 QENENKTKVSGTKRIKHEIPKSKKEKE--------NAPKPQDAAEVSSEQEKEQETLISQ 481 Q +E KR++ E K E E N + E EKE ++ I Q Sbjct: 220 QPSETCPPARRAKRMRAEAMNIKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSSIKQ 279 Query: 482 KSI 484 + I Sbjct: 280 EPI 282 >gi|169218173 PREDICTED: similar to Jumonji, AT rich interactive domain 1B (RBP2-like), partial [Homo sapiens] Length = 977 Score = 52.4 bits (124), Expect = 3e-06 Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 25/183 (13%) Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383 FL + KY + + + + +IP++ K ++L+ + + + GG+ + R+W I ++G Sbjct: 103 FLDQIAKYWELQGSTL-KIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGF 161 Query: 384 NPGSTSAATCTRRHYERLILPYERFIKGE--------------EDKPLPPIKPRKQENSS 429 PG + + R HYER++ PY F+ G+ +DK P Q S Sbjct: 162 APGK-AVGSHIRGHYERILNPYNLFLSGDSLRCLQKPNLTTDTKDKEYKP-HDIPQRQSV 219 Query: 430 QENENKTKVSGTKRIKHEIPKSKKEKE--------NAPKPQDAAEVSSEQEKEQETLISQ 481 Q +E KR++ E K E E N + E EKE ++ I Q Sbjct: 220 QPSETCPPARRAKRMRAEAMNIKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSSIKQ 279 Query: 482 KSI 484 + I Sbjct: 280 EPI 282 >gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein [Homo sapiens] Length = 593 Score = 50.8 bits (120), Expect = 7e-06 Identities = 25/83 (30%), Positives = 44/83 (53%) Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383 FL L+ +M++R TP+ RIP + + ++L+ ++ + GG + ++ W+ I L Sbjct: 244 FLDDLFSFMQKRGTPVNRIPIMAKQVLDLFMLYVLVTEKGGLVEVINKKLWREITKGLNL 303 Query: 384 NPGSTSAATCTRRHYERLILPYE 406 TSAA R Y + + PYE Sbjct: 304 PTSITSAAFTLRTQYMKYLYPYE 326 >gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 [Homo sapiens] Length = 559 Score = 49.3 bits (116), Expect = 2e-05 Identities = 60/260 (23%), Positives = 103/260 (39%), Gaps = 28/260 (10%) Query: 416 PLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQ 475 PL K+ S +++ K S H++ K +E+ +D+ SS +E E+ Sbjct: 165 PLSAFSDPKKTKPSHGSKDANKESSKTSKPHKVTKEHRERPR----KDSESKSSSKELER 220 Query: 476 ETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGE 535 E S K L + K +E + P A+ +P+ K+ + + Sbjct: 221 EQAKSSKDTSRKLGEGRLPK-----EEKAPPPKAAFKEPK------MALKETKLESTSPK 269 Query: 536 KGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASF 595 GP PP P P A K P + P PSA K SK +P + P+ +S Sbjct: 270 GGPPPPPPPPPRASSKR----PATADSP--KPSAKKQKKSSSK--GSRSAPGTSPRTSSS 321 Query: 596 PSFPTTQPPLANQNETEDDKLPAMAD-YIANCTVKVDQLGSDD---IHNALKQTPKVLVV 651 SF + + P +++ T +K+ A ++ A ++V++ S+D + Q+ Sbjct: 322 SSF-SDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSPSNSS 380 Query: 652 QSFDMFKDKDLTGPMNENHG 671 S D D D N + G Sbjct: 381 SSSDSSSDSDFEPSQNHSQG 400 >gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sapiens] Length = 1690 Score = 49.3 bits (116), Expect = 2e-05 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%) Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383 FL L K+ + + + + +IP + K ++L+ + + GG+E +T ++W + LG Sbjct: 90 FLDQLAKFWELQGSTL-KIPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGY 148 Query: 384 NPGSTSAATCTRRHYERLILPYERFIKG 411 PG + + HYER++ PYE F G Sbjct: 149 LPGK-GTGSLLKSHYERILYPYELFQSG 175 >gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sapiens] Length = 1641 Score = 49.3 bits (116), Expect = 2e-05 Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%) Query: 324 FLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGG 383 FL L K+ + + + + +IP + K ++L+ + + GG+E +T ++W + LG Sbjct: 90 FLDQLAKFWELQGSTL-KIPVVERKILDLYALSKIVASKGGFEMVTKEKKWSKVGSRLGY 148 Query: 384 NPGSTSAATCTRRHYERLILPYERFIKG 411 PG + + HYER++ PYE F G Sbjct: 149 LPGK-GTGSLLKSHYERILYPYELFQSG 175 >gi|5453638 AT rich interactive domain 3B [Homo sapiens] Length = 560 Score = 49.3 bits (116), Expect = 2e-05 Identities = 26/87 (29%), Positives = 46/87 (52%) Query: 320 DEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYD 379 + + FL L+ +M++R TPI RIP + + ++L+ +++ + GG I ++ W+ I Sbjct: 217 ERKEFLDDLFVFMQKRGTPINRIPIMAKQILDLYMLYKLVTEKGGLVEIINKKIWREITK 276 Query: 380 ELGGNPGSTSAATCTRRHYERLILPYE 406 L TSAA R Y + + YE Sbjct: 277 GLNLPTSITSAAFTLRTQYMKYLYAYE 303 >gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo sapiens] Length = 1560 Score = 48.1 bits (113), Expect = 5e-05 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%) Query: 341 RIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYER 400 +IP + + ++L+++ + + GGYE I R+W + L PG + + R HYER Sbjct: 101 KIPNVERRILDLYSLSKIVVEEGGYEAICKDRRWARVAQRLNYPPGK-NIGSLLRSHYER 159 Query: 401 LILPYERFIKGEEDKPLPPIKPRKQENSSQENENK 435 ++ PYE + G L R +N ++ E K Sbjct: 160 IVYPYEMYQSGAN---LVQCNTRPFDNEEKDKEYK 191 >gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo sapiens] Length = 1539 Score = 48.1 bits (113), Expect = 5e-05 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 341 RIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYER 400 +IP + K ++L+++ + + GGYE I R+W + L PG + + R HYER Sbjct: 101 KIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYPPGK-NIGSLLRSHYER 159 Query: 401 LILPYERFIKG 411 +I PYE F G Sbjct: 160 IIYPYEMFQSG 170 >gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo sapiens] Length = 1570 Score = 48.1 bits (113), Expect = 5e-05 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 341 RIPYLGFKQINLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYER 400 +IP + K ++L+++ + + GGYE I R+W + L PG + + R HYER Sbjct: 101 KIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLHYPPGK-NIGSLLRSHYER 159 Query: 401 LILPYERFIKG 411 +I PYE F G Sbjct: 160 IIYPYEMFQSG 170 >gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] Length = 1020 Score = 47.8 bits (112), Expect = 6e-05 Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 11/213 (5%) Query: 403 LPYERFIKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQ 462 +P + +K + P + + +E + E K + K + K + K+ APKP+ Sbjct: 814 IPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPK 873 Query: 463 DAAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQ 522 + EK +E+ + K A+ KKK+ ++ + + + D + +T+ Sbjct: 874 VEEKKEPAVEKPKESKVEAKK-----EEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEV 928 Query: 523 GSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCF 582 ++K ++A K P+ P APEK A K+P P +K++ K Sbjct: 929 ---AKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKA-KKPEEKPKTEAKAKEDDK--TL 982 Query: 583 TESPESEPQEASFPSFPTTQPPLANQNETEDDK 615 ++ P E + S T Q + +DK Sbjct: 983 SKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDK 1015 Score = 46.6 bits (109), Expect = 1e-04 Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 20/211 (9%) Query: 411 GEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSE 470 GEE+ PP +E +S E E K+ V + E +KE+ +P AEV S Sbjct: 497 GEEETKSPP----AEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSP-----AEVKSP 547 Query: 471 QEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVA 530 ++ + KS PE + K++ + E + A E+ + + EK Sbjct: 548 EKAKSPAKEEAKSPPE--AKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAK 605 Query: 531 EEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEP 590 E+ +P +P+ K+ A P K P + S +K+E+K +SPE E Sbjct: 606 SPVKEEAKSPAEAKSPV---KEEAKSPAEVKSPEKAKS---PTKEEAKSPEKAKSPEKE- 658 Query: 591 QEASFPSFPTTQPPLANQNETEDDKLPAMAD 621 EA P P A E K P A+ Sbjct: 659 -EAKSPE-KAKSPVKAEAKSPEKAKSPVKAE 687 Score = 46.6 bits (109), Expect = 1e-04 Identities = 51/219 (23%), Positives = 77/219 (35%), Gaps = 22/219 (10%) Query: 410 KGEEDKPLPPIKPRKQENSSQENEN---KTKVSGTKRIKHEIPKSKKEKENAPKPQDAAE 466 K E P P K+E S E K + ++ K + K E A P Sbjct: 643 KEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA 702 Query: 467 VSSEQEK---EQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQG 523 S E+ K ++E +K+ A +K + + AK PEK D Sbjct: 703 KSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVK 762 Query: 524 SNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPL----TSPSALVDSKQESKL 579 S K + + P P +P K+ P +K PL +P + K+E K Sbjct: 763 SPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVK- 821 Query: 580 CCFTESPESEPQEASFPSFPTTQPPLANQNETEDDKLPA 618 E +PQE +PP + E++K PA Sbjct: 822 --SPVKEEEKPQEVK-----VKEPP----KKAEEEKAPA 849 Score = 45.8 bits (107), Expect = 2e-04 Identities = 46/169 (27%), Positives = 73/169 (43%), Gaps = 17/169 (10%) Query: 421 KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLIS 480 K K+ +E +T+V T+ + E K KE+E K ++ E + E+ET Sbjct: 449 KSEKETVIVEEQTEETQV--TEEVTEEEEKEAKEEEG--KEEEGGEEEEAEGGEEET--- 501 Query: 481 QKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETD--QGSNSEKVAEEAGEKGP 538 P AA +K+ + + AK A PEK+ + + EK A E+ Sbjct: 502 --KSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAK 559 Query: 539 TPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPE 587 +PP +PEK+ A P K P + S +K+E+K +SPE Sbjct: 560 SPP---EAKSPEKEEAKSPAEVKSPEKAKS---PAKEEAKSPAEAKSPE 602 Score = 40.0 bits (92), Expect = 0.013 Identities = 59/264 (22%), Positives = 92/264 (34%), Gaps = 26/264 (9%) Query: 409 IKGEEDKPLPPIKPRKQENSSQ---ENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAA 465 +K E P P K+E S ++ K K + K EKE A P A Sbjct: 520 VKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSP---A 576 Query: 466 EVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSN 525 EV S ++ + KS E A +K + + AK A P K ++ + Sbjct: 577 EVKSPEKAKSPAKEEAKSPAE----AKSPEKAKSPVKEEAKSPAEAKSPVK----EEAKS 628 Query: 526 SEKVAEEAGEKGPTPPLPSAP---LAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCF 582 +V K PT +P +PEK+ A P +K P+ + ++K K Sbjct: 629 PAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKA-----EAKSPEKAKSP 683 Query: 583 TESPESEPQEASFP-SFPTTQPPLANQNETEDDKLPAMADYIANCTVKVDQLGSDDIHNA 641 ++ P++A P P A E+ K P A K + + Sbjct: 684 VKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEE 743 Query: 642 LKQTPKVLVVQSFDMFKDKDLTGP 665 K K +S + K D+ P Sbjct: 744 AKSPEK---AKSPEKAKTLDVKSP 764 Score = 39.3 bits (90), Expect = 0.023 Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 9/198 (4%) Query: 422 PRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQ 481 P K+E S E K + EIPK ++ K + + EV ++ ++ Sbjct: 788 PVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKA 847 Query: 482 KSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPP 541 + P+ D KK+ +E + + +P + + ++K E +K PTP Sbjct: 848 PATPKTEEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPE 907 Query: 542 LPSAPLAPEKDSA----LVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPS 597 + K+ A A K+P A SK K E +++ ++A P Sbjct: 908 KEAPAKVEVKEDAKPKEKTEVAKKEP-DDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPE 966 Query: 598 FPTTQPPLANQNETEDDK 615 + P EDDK Sbjct: 967 ----EKPKTEAKAKEDDK 980 Score = 37.0 bits (84), Expect = 0.11 Identities = 58/228 (25%), Positives = 82/228 (35%), Gaps = 29/228 (12%) Query: 412 EEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEI--PKSKKEKENAPKPQDAAEVSS 469 EE K K ++ S + E K+ +K E P K E A P S Sbjct: 590 EEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSP 649 Query: 470 EQEK--EQETLISQKSIPEPLPA-ADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNS 526 E+ K E+E S + P+ A A +K + + AK P K+ Sbjct: 650 EKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAK 709 Query: 527 EKVAEEAG--EKGPTPPLPSAPLAPEKDSALVPGASKQP-------------LTSPSALV 571 V EEA EK +P A PEK + V +K P + SP A Sbjct: 710 SPVKEEAKSPEKAKSPVKEEA-KTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKT 768 Query: 572 DSKQESKLCCFTESPESE-PQEASFP-SFPTTQPPLANQNETEDDKLP 617 +K+E++ SP + P++A P P A ED K P Sbjct: 769 PAKEEAR------SPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAP 810 >gi|226437579 NAC alpha domain containing [Homo sapiens] Length = 1562 Score = 47.4 bits (111), Expect = 8e-05 Identities = 43/191 (22%), Positives = 73/191 (38%), Gaps = 12/191 (6%) Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488 SQ+ E + + +P + +APKP AA S+Q +E TL ++ PL Sbjct: 827 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPL 886 Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAG-EKGPTPPLPSAPL 547 P D +A P++ + + D + ++ G GP P + P Sbjct: 887 PLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQ 946 Query: 548 APEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPPLAN 607 + ++ PG T P A + ++ + P P+E + + PT P A Sbjct: 947 TLQAEAGCAPG------TEPVATMAQQEVGEAL----GPRPAPEEKN-AALPTVPEPAAL 995 Query: 608 QNETEDDKLPA 618 +DD PA Sbjct: 996 DQVQQDDPQPA 1006 Score = 35.8 bits (81), Expect = 0.25 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 22/146 (15%) Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488 SQ+ E + + +P E +APKP AA + S+Q +E TL ++ PL Sbjct: 627 SQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPL 686 Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP----- 543 P D + KP+A+ T +E+ + TPPLP Sbjct: 687 PLQDTD------LSSAPKPVAA--------ATLVSQQAEEGLTLPQDSAMTPPLPLQDTD 732 Query: 544 --SAPLAPEKDSALVPGASKQPLTSP 567 SAP P + LV +++ LT P Sbjct: 733 LSSAP-KPVAAATLVSQQAEEGLTLP 757 Score = 35.8 bits (81), Expect = 0.25 Identities = 49/201 (24%), Positives = 76/201 (37%), Gaps = 28/201 (13%) Query: 380 ELGGNPGSTSAATCTRRHYER-LILPYERFIKG-----EEDKPLPPIKPRKQENSSQENE 433 EL P +AAT + E L LP + + + D P SQ+ E Sbjct: 652 ELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 711 Query: 434 NKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPLPAADM 493 + + +P + +APKP AA + S+Q +E TL ++ PLP D Sbjct: 712 EGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDT 771 Query: 494 KKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP-------SAP 546 + KP+A+ T +E+ + TPPLP SAP Sbjct: 772 D------LSSAPKPVAA--------ATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAP 817 Query: 547 LAPEKDSALVPGASKQPLTSP 567 P + +V +++ LT P Sbjct: 818 -KPVAAATIVSQQAEEGLTLP 837 Score = 35.4 bits (80), Expect = 0.33 Identities = 46/177 (25%), Positives = 66/177 (37%), Gaps = 32/177 (18%) Query: 448 IPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKP 507 +P + +APKP AA + S+Q +E TL + PLP D E S+ P Sbjct: 606 LPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQD--------TELSSAP 657 Query: 508 LASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP-------SAPLAPEKDSALVPGAS 560 + ++G + + TPPLP SAP P + LV + Sbjct: 658 KPVAAATLVSQQAEEGLTLPQ------DSAMTPPLPLQDTDLSSAP-KPVAAATLVSQQA 710 Query: 561 KQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPPLANQNETEDDKLP 617 ++ LT P DS L P + +S P P L +Q E LP Sbjct: 711 EEGLTLPQ---DSAMTPPL------PLQDTDLSSAPK-PVAAATLVSQQAEEGLTLP 757 Score = 34.3 bits (77), Expect = 0.73 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 16/137 (11%) Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488 SQ+ E + + +P + +APKP AA + S+Q +E TL ++ PL Sbjct: 747 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPL 806 Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLPSAPLA 548 P D + KP+A+ T +E+ + TPPLP Sbjct: 807 PLQDTD------LSSAPKPVAA--------ATIVSQQAEEGLTLPQDSAMTPPLPLQD-- 850 Query: 549 PEKDSALVPGASKQPLT 565 + SA P A+ P++ Sbjct: 851 TDLSSAPKPVAAATPVS 867 >gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] Length = 1562 Score = 47.4 bits (111), Expect = 8e-05 Identities = 43/191 (22%), Positives = 73/191 (38%), Gaps = 12/191 (6%) Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488 SQ+ E + + +P + +APKP AA S+Q +E TL ++ PL Sbjct: 827 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTPPL 886 Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAG-EKGPTPPLPSAPL 547 P D +A P++ + + D + ++ G GP P + P Sbjct: 887 PLQDTDLSSAPKPVAAATPVSQQAEEGLTLPQDSAMTAPLPLQDTGPTSGPEPLAVATPQ 946 Query: 548 APEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPPLAN 607 + ++ PG T P A + ++ + P P+E + + PT P A Sbjct: 947 TLQAEAGCAPG------TEPVATMAQQEVGEAL----GPRPAPEEKN-AALPTVPEPAAL 995 Query: 608 QNETEDDKLPA 618 +DD PA Sbjct: 996 DQVQQDDPQPA 1006 Score = 35.8 bits (81), Expect = 0.25 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 22/146 (15%) Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488 SQ+ E + + +P E +APKP AA + S+Q +E TL ++ PL Sbjct: 627 SQQAEEGLTLPQDSVMTPPLPLQDTELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPL 686 Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP----- 543 P D + KP+A+ T +E+ + TPPLP Sbjct: 687 PLQDTD------LSSAPKPVAA--------ATLVSQQAEEGLTLPQDSAMTPPLPLQDTD 732 Query: 544 --SAPLAPEKDSALVPGASKQPLTSP 567 SAP P + LV +++ LT P Sbjct: 733 LSSAP-KPVAAATLVSQQAEEGLTLP 757 Score = 35.8 bits (81), Expect = 0.25 Identities = 49/201 (24%), Positives = 76/201 (37%), Gaps = 28/201 (13%) Query: 380 ELGGNPGSTSAATCTRRHYER-LILPYERFIKG-----EEDKPLPPIKPRKQENSSQENE 433 EL P +AAT + E L LP + + + D P SQ+ E Sbjct: 652 ELSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAE 711 Query: 434 NKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPLPAADM 493 + + +P + +APKP AA + S+Q +E TL ++ PLP D Sbjct: 712 EGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATLVSQQAEEGLTLPQDSAMTPPLPLQDT 771 Query: 494 KKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP-------SAP 546 + KP+A+ T +E+ + TPPLP SAP Sbjct: 772 D------LSSAPKPVAA--------ATIVSQQAEEGLTLPQDSAMTPPLPLQDTDLSSAP 817 Query: 547 LAPEKDSALVPGASKQPLTSP 567 P + +V +++ LT P Sbjct: 818 -KPVAAATIVSQQAEEGLTLP 837 Score = 35.4 bits (80), Expect = 0.33 Identities = 46/177 (25%), Positives = 66/177 (37%), Gaps = 32/177 (18%) Query: 448 IPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKP 507 +P + +APKP AA + S+Q +E TL + PLP D E S+ P Sbjct: 606 LPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSVMTPPLPLQD--------TELSSAP 657 Query: 508 LASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP-------SAPLAPEKDSALVPGAS 560 + ++G + + TPPLP SAP P + LV + Sbjct: 658 KPVAAATLVSQQAEEGLTLPQ------DSAMTPPLPLQDTDLSSAP-KPVAAATLVSQQA 710 Query: 561 KQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPPLANQNETEDDKLP 617 ++ LT P DS L P + +S P P L +Q E LP Sbjct: 711 EEGLTLPQ---DSAMTPPL------PLQDTDLSSAPK-PVAAATLVSQQAEEGLTLP 757 Score = 34.3 bits (77), Expect = 0.73 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 16/137 (11%) Query: 429 SQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPL 488 SQ+ E + + +P + +APKP AA + S+Q +E TL ++ PL Sbjct: 747 SQQAEEGLTLPQDSAMTPPLPLQDTDLSSAPKPVAAATIVSQQAEEGLTLPQDSAMTPPL 806 Query: 489 PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLPSAPLA 548 P D + KP+A+ T +E+ + TPPLP Sbjct: 807 PLQDTD------LSSAPKPVAA--------ATIVSQQAEEGLTLPQDSAMTPPLPLQD-- 850 Query: 549 PEKDSALVPGASKQPLT 565 + SA P A+ P++ Sbjct: 851 TDLSSAPKPVAAATPVS 867 >gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sapiens] Length = 699 Score = 47.0 bits (110), Expect = 1e-04 Identities = 47/235 (20%), Positives = 92/235 (39%), Gaps = 21/235 (8%) Query: 404 PYERFIKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQD 463 P ++ +K + P K K +S ++ ++ + ++ K K + + PKP Sbjct: 145 PVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPAR 204 Query: 464 AAEV-----SSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDN 518 AA ++ + S E AA KK + Q + P+ + P + + Sbjct: 205 AAPKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKS 264 Query: 519 ETDQGSNSEKVAEEA----GEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSK 574 + + S+S++ E+ + GP +P P AP +L K+ + + S+ Sbjct: 265 SSSEDSSSDEEEEQKKPMKNKPGPYSSVPP-PSAPPPKKSLGTQPPKKAVEKQQPVESSE 323 Query: 575 QESKLCCFTESPESEPQEASFPSFPTTQPPLA-----------NQNETEDDKLPA 618 S + E +P + S TT+PP A + + +EDD+ P+ Sbjct: 324 DSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPS 378 Score = 38.1 bits (87), Expect = 0.050 Identities = 33/130 (25%), Positives = 55/130 (42%), Gaps = 16/130 (12%) Query: 424 KQENSSQENENK-----TKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETL 478 ++ +SS+E + K TK T + +P + + + D+ SSE+E+E+ + Sbjct: 428 EESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSK 487 Query: 479 ISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGP 538 + K P+ K+ G S A + E N + +SE+ EE KG Sbjct: 488 SAVKKKPQ---------KVAGGAAPSKPASAKKGKAESSNSSSSDDSSEE--EEEKLKGK 536 Query: 539 TPPLPSAPLA 548 P P AP A Sbjct: 537 GSPRPQAPKA 546 Score = 35.0 bits (79), Expect = 0.43 Identities = 43/185 (23%), Positives = 69/185 (37%), Gaps = 23/185 (12%) Query: 427 NSSQENENKTKVSGTKRI--KHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSI 484 +S E K + K + K + K+ + P + ++ S ++E+E K+ Sbjct: 226 SSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNK 285 Query: 485 PEPL-----PAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGP- 538 P P P+A KK G Q P V+ ++ E+ + S+ E + EK P Sbjct: 286 PGPYSSVPPPSAPPPKKSLGTQ-----PPKKAVEKQQPVESSEDSSDESDSSSEEEKKPP 340 Query: 539 --------TPPLPSAPLAPEKDSALVPGASKQPLTSPS--ALVDSKQESKLCCFTESPES 588 T P A A E S S + +PS A +K T+SP Sbjct: 341 TKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAV 400 Query: 589 EPQEA 593 +P A Sbjct: 401 KPAAA 405 Score = 31.2 bits (69), Expect = 6.1 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 14/149 (9%) Query: 401 LILPYERFIKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPK 460 L LP ++ +G D +SS+E E KT S K+ ++ + A Sbjct: 455 LSLPAKQAPQGSRDS-----SSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASA 509 Query: 461 PQDAAEVSS-----EQEKEQETLISQKSIPEP-LPAADMKKKIEGYQEFSAKPLASRVDP 514 + AE S+ + +E+E + K P P P A+ + +AK + Sbjct: 510 KKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEE 569 Query: 515 EKDNE---TDQGSNSEKVAEEAGEKGPTP 540 +K + GS ++ EA ++ TP Sbjct: 570 KKKAAVVVSKSGSLKKRKQNEAAKEAETP 598 >gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo sapiens] Length = 1158 Score = 46.6 bits (109), Expect = 1e-04 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 6/133 (4%) Query: 485 PEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLPS 544 P P P ++K G + A+ V PEK D+G +K + G K P L Sbjct: 58 PPPEPTPRVRKAQAGGKPGKRPGTAAEVPPEKTK--DKGKKGKK---DKGPKVPKESLEG 112 Query: 545 APLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPP 604 +P P+K P A+K+P P K + K T+ P+ +P +A+ +PP Sbjct: 113 SPRPPKKGKEKPPKATKKPKEKPPK-ATKKPKEKPPKATKKPKEKPPKATKKPPSGKRPP 171 Query: 605 LANQNETEDDKLP 617 + +ET + LP Sbjct: 172 ILAPSETLEWPLP 184 Score = 35.4 bits (80), Expect = 0.33 Identities = 56/236 (23%), Positives = 86/236 (36%), Gaps = 39/236 (16%) Query: 413 EDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPK-SKKEKENAPKPQDAAEVSSEQ 471 E P PP K +++ + + + TK+ K + PK +KK KE PK A Sbjct: 111 EGSPRPPKKGKEKPPKATKKPKEKPPKATKKPKEKPPKATKKPKEKPPK----ATKKPPS 166 Query: 472 EKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPL--------------ASRVDPEKD 517 K L +++ PLP E QE A PL A PE + Sbjct: 167 GKRPPILAPSETLEWPLPPPPSPGPEELPQEGGA-PLSNNWQNPGEETHVEAREHQPEPE 225 Query: 518 NETDQGS--NSEKVAEEAGE--------KGPTPPLPSAPLAPEKDSALVPGASKQPLTSP 567 ET+Q + ++++ E E K P PP PS PE+ P K P +P Sbjct: 226 EETEQPTLDYNDQIEREDYEDFEYIRRQKQPRPP-PSRRRRPERVWP-EPPEEKAPAPAP 283 Query: 568 SALVDSKQESKLCCFTES-------PESEPQEASFPSFPTTQPPLANQNETEDDKL 616 ++ + L P + + F P +P Q + E ++L Sbjct: 284 EERIEPPVKPLLPPLPPDYGDGYVIPNYDDMDYYFGPPPPQKPDAERQTDEEKEEL 339 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 46.6 bits (109), Expect = 1e-04 Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 32/226 (14%) Query: 421 KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVS--------SEQE 472 K RK + + +++ K+K KR + P K + + D+A S S Sbjct: 225 KKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAA 284 Query: 473 KEQETLISQKSIPEPL-------------PAADMKKKIEGYQEFSAKPLASRVDPEKDNE 519 K T ++ +S P P P ++ + + +P + D +KD + Sbjct: 285 KTHTTALAGRS-PSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKK 343 Query: 520 TDQGSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGA----SKQPLTSPSALVDSKQ 575 ++ + + E GP PP P+ LA + P A S++P+ PS ++ Sbjct: 344 -EKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRD 402 Query: 576 ESKLCCFTESPESEPQEASFPSF-PTTQPPLANQNETEDDKLPAMA 620 S +SPE PQ +S S P+ QP +++ + + P A Sbjct: 403 RSP----PKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPA 444 Score = 42.7 bits (99), Expect = 0.002 Identities = 35/186 (18%), Positives = 70/186 (37%), Gaps = 10/186 (5%) Query: 417 LPPIKPRKQENSSQENENKTKVSGTKRIKHEIP---KSKKEKENAP-KPQDAAEVSSEQE 472 L P K R+ +SS + + + S + S E + P +P+ A + Sbjct: 2524 LQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPT 2583 Query: 473 KEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEE 532 + + + PEP PA ++ S+ +S + + S+S + Sbjct: 2584 PAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2643 Query: 533 AGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFT------ESP 586 + P+P P P+ S P ++ SP +DS ++S+ ++ SP Sbjct: 2644 SSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSP 2703 Query: 587 ESEPQE 592 + P++ Sbjct: 2704 QPSPRD 2709 Score = 37.7 bits (86), Expect = 0.066 Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 11/169 (6%) Query: 423 RKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQK 482 R + SS E +NK++ S + + P+ KK + ++ + + +SS + K + L ++ Sbjct: 721 RGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRS---LSSPRSKAKSRLSLRR 777 Query: 483 SIPEPLPAADMKKKI--EGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540 S+ P K + + S++P A P + + + ++ ++ + + Sbjct: 778 SLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSS 837 Query: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESE 589 P P+ S P +TSP A S + CF SP+ E Sbjct: 838 SSPH----PKVKSGTPPRQGS--ITSPQANEQSVTPQRRSCFESSPDPE 880 Score = 36.6 bits (83), Expect = 0.15 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 8/127 (6%) Query: 415 KPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKE 474 K P++ R + SS E ++K+++S + P+ K + AP+ Q ++ S E + Sbjct: 1568 KTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAP 1627 Query: 475 QETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAG 534 + +++P + K E S+ +S P K +GS S + E Sbjct: 1628 -----APRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRS---SPEPK 1679 Query: 535 EKGPTPP 541 K TPP Sbjct: 1680 TKSRTPP 1686 Score = 31.2 bits (69), Expect = 6.1 Identities = 46/189 (24%), Positives = 67/189 (35%), Gaps = 13/189 (6%) Query: 413 EDKPLPPI-KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQ 471 E K LP +PR + SS E NK +R E +K P Q + SS Q Sbjct: 1485 EPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGSS-Q 1543 Query: 472 EKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAE 531 E + + S + E + D K K + PL R E D S +++ Sbjct: 1544 ELDVKPSASPQERSESDSSPDSKAK-------TRTPLRQRSRSGSSPEVDSKS---RLSP 1593 Query: 532 EAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALV-DSKQESKLCCFTESPESEP 590 G +P + P A + + + + +P AL S+ S SPE Sbjct: 1594 RRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSS 1653 Query: 591 QEASFPSFP 599 S P P Sbjct: 1654 STESSPEHP 1662 >gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 [Homo sapiens] Length = 916 Score = 45.8 bits (107), Expect = 2e-04 Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 12/197 (6%) Query: 426 ENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKS-- 483 E + E+E I E+ S KE+ K + A E E E E+E + ++KS Sbjct: 458 EETKVEDEKSEMEEALTAITEELAVSMKEE----KKEAAEEKEEEPEAEEEEVAAKKSPV 513 Query: 484 ---IPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540 PE K++ EG +E + ++ D ++ +++ +SEK E E+G T Sbjct: 514 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEK-EEGEQEEGETE 572 Query: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT 600 A K+ V S++ T + D+K E + P+S +E P Sbjct: 573 AEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKG--KSPV 630 Query: 601 TQPPLANQNETEDDKLP 617 + P+ + ++ K P Sbjct: 631 PKSPVEEKGKSPVPKSP 647 Score = 38.5 bits (88), Expect = 0.038 Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 10/130 (7%) Query: 409 IKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVS 468 ++ + P+P + ++ ++ + + K K +K E PK +K ++ KP+D E Sbjct: 674 VEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVK-EAPKEEKVEKKEEKPKDVPE-- 730 Query: 469 SEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQG-SNSE 527 +K+ E+ + ++++ E + K ++ + E K + EK+ E G SE Sbjct: 731 ---KKKAESPVKEEAVAE---VVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSE 784 Query: 528 KVAEEAGEKG 537 + + G KG Sbjct: 785 EEGSDKGAKG 794 Score = 35.4 bits (80), Expect = 0.33 Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 19/190 (10%) Query: 410 KGEEDKPLPPIKPRKQE---NSSQENENKTKVSGT---KRIKHEIPKSKKEKENAPKPQD 463 KG+ P P++ + + S E + K+ VS + ++ K +PKS E+ + Sbjct: 638 KGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSK---- 693 Query: 464 AAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLA-SRVDPEKDNETDQ 522 AEV ++KE+E +K + E ++KK E ++ K A S V E E Sbjct: 694 -AEVGKGEQKEEE----EKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVT 748 Query: 523 GSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCF 582 + S KV E K PL EK+ A G S++ + A K++ + Sbjct: 749 ITKSVKVHLEKETKEEGKPLQQ---EKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGE 805 Query: 583 TESPESEPQE 592 E E QE Sbjct: 806 VEGKEEVEQE 815 Score = 32.0 bits (71), Expect = 3.6 Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 26/184 (14%) Query: 424 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKS 483 K+E QE E + G K + E S+KE + + + E +E E E Sbjct: 527 KEEEEGQEEEEEED-EGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAE--------- 576 Query: 484 IPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP 543 E A + KK E +E + K + + E + + S EKG + P+P Sbjct: 577 -GEEAEAKEEKKVEEKSEEVATK---EELVADAKVEKPEKAKSPVPKSPVEEKGKS-PVP 631 Query: 544 SAPLAPEKDSALVPGA-----SKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSF 598 +P+ EK + VP + K P+ P + V+ K +S + ++SP E ++ P Sbjct: 632 KSPV-EEKGKSPVPKSPVEEKGKSPV--PKSPVEEKGKSPV---SKSPVEEKAKSPVPKS 685 Query: 599 PTTQ 602 P + Sbjct: 686 PVEE 689 >gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 [Homo sapiens] Length = 540 Score = 45.8 bits (107), Expect = 2e-04 Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 12/197 (6%) Query: 426 ENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKS-- 483 E + E+E I E+ S KE+ K + A E E E E+E + ++KS Sbjct: 82 EETKVEDEKSEMEEALTAITEELAVSMKEE----KKEAAEEKEEEPEAEEEEVAAKKSPV 137 Query: 484 ---IPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTP 540 PE K++ EG +E + ++ D ++ +++ +SEK E E+G T Sbjct: 138 KATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEK-EEGEQEEGETE 196 Query: 541 PLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPT 600 A K+ V S++ T + D+K E + P+S +E P Sbjct: 197 AEAEGEEAEAKEEKKVEEKSEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKG--KSPV 254 Query: 601 TQPPLANQNETEDDKLP 617 + P+ + ++ K P Sbjct: 255 PKSPVEEKGKSPVPKSP 271 Score = 38.5 bits (88), Expect = 0.038 Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 10/130 (7%) Query: 409 IKGEEDKPLPPIKPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVS 468 ++ + P+P + ++ ++ + + K K +K E PK +K ++ KP+D E Sbjct: 298 VEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVK-EAPKEEKVEKKEEKPKDVPE-- 354 Query: 469 SEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQG-SNSE 527 +K+ E+ + ++++ E + K ++ + E K + EK+ E G SE Sbjct: 355 ---KKKAESPVKEEAVAE---VVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSE 408 Query: 528 KVAEEAGEKG 537 + + G KG Sbjct: 409 EEGSDKGAKG 418 Score = 35.4 bits (80), Expect = 0.33 Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 19/190 (10%) Query: 410 KGEEDKPLPPIKPRKQE---NSSQENENKTKVSGT---KRIKHEIPKSKKEKENAPKPQD 463 KG+ P P++ + + S E + K+ VS + ++ K +PKS E+ + Sbjct: 262 KGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSK---- 317 Query: 464 AAEVSSEQEKEQETLISQKSIPEPLPAADMKKKIEGYQEFSAKPLA-SRVDPEKDNETDQ 522 AEV ++KE+E +K + E ++KK E ++ K A S V E E Sbjct: 318 -AEVGKGEQKEEE----EKEVKEAPKEEKVEKKEEKPKDVPEKKKAESPVKEEAVAEVVT 372 Query: 523 GSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGASKQPLTSPSALVDSKQESKLCCF 582 + S KV E K PL EK+ A G S++ + A K++ + Sbjct: 373 ITKSVKVHLEKETKEEGKPLQQ---EKEKEKAGGEGGSEEEGSDKGAKGSRKEDIAVNGE 429 Query: 583 TESPESEPQE 592 E E QE Sbjct: 430 VEGKEEVEQE 439 Score = 32.0 bits (71), Expect = 3.6 Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 26/184 (14%) Query: 424 KQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKS 483 K+E QE E + G K + E S+KE + + + E +E E E Sbjct: 151 KEEEEGQEEEEEED-EGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAE--------- 200 Query: 484 IPEPLPAADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLP 543 E A + KK E +E + K + + E + + S EKG + P+P Sbjct: 201 -GEEAEAKEEKKVEEKSEEVATK---EELVADAKVEKPEKAKSPVPKSPVEEKGKS-PVP 255 Query: 544 SAPLAPEKDSALVPGA-----SKQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSF 598 +P+ EK + VP + K P+ P + V+ K +S + ++SP E ++ P Sbjct: 256 KSPV-EEKGKSPVPKSPVEEKGKSPV--PKSPVEEKGKSPV---SKSPVEEKAKSPVPKS 309 Query: 599 PTTQ 602 P + Sbjct: 310 PVEE 313 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.312 0.130 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,775,664 Number of Sequences: 37866 Number of extensions: 2676695 Number of successful extensions: 12550 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 559 Number of HSP's that attempted gapping in prelim test: 10559 Number of HSP's gapped (non-prelim): 2198 length of query: 1188 length of database: 18,247,518 effective HSP length: 113 effective length of query: 1075 effective length of database: 13,968,660 effective search space: 15016309500 effective search space used: 15016309500 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.