Guide to the Human Genome
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Name: LPAR2 Sequence: fasta or formatted (351aa) NCBI GI: 7305013
Description:

lysophosphatidic acid receptor 2

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         34           3
 C cysteine            3.4         12           2
 D aspartate           2.0          7           1
 E glutamate           3.4         12           1
 F phenylalanine       3.7         13           2
 G glycine             5.7         20           2
 H histidine           3.1         11           1
 I isoleucine          3.1         11           2
 K lysine              1.1          4           1
 L leucine            16.2         57           3
 M methionine          3.1         11           1
 N asparagine          2.8         10           2
 P proline             2.8         10           1
 Q glutamine           2.3          8           1
 R arginine            8.3         29           3
 S serine              7.7         27           2
 T threonine           5.1         18           2
 V valine             10.8         38           4
 W tryptophan          1.7          6           1
 Y tyrosine            3.7         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lysophosphatidic acid receptor 2 
LPAR1                 0.514   lysophosphatidic acid receptor 1 
LPAR1                 0.514   lysophosphatidic acid receptor 1 
LPAR3                 0.455   lysophosphatidic acid receptor 3 
S1PR1                 0.273   sphingosine-1-phosphate receptor 1 
S1PR3                 0.253   sphingosine-1-phosphate receptor 3 
S1PR2                 0.244   endothelial differentiation, sphingolipid G-protein...
S1PR5                 0.244   endothelial differentiation, sphingolipid G-protein-...
S1PR4                 0.232   sphingosine-1-phosphate receptor 4 precursor 
GPR3                  0.162   G protein-coupled receptor 3 
GPR6                  0.152   G protein-coupled receptor 6 
GPR12                 0.152   G protein-coupled receptor 12 
CNR1                  0.137   cannabinoid receptor 1 isoform a 
CNR1                  0.137   cannabinoid receptor 1 isoform a 
CNR1                  0.137   cannabinoid receptor 1 isoform a 
CNR1                  0.137   cannabinoid receptor 1 isoform a 
CNR1                  0.137   cannabinoid receptor 1 isoform a 
CNR1                  0.137   cannabinoid receptor 1 isoform b 
MC5R                  0.132   melanocortin 5 receptor 
MC4R                  0.119   melanocortin 4 receptor 
MC3R                  0.119   melanocortin 3 receptor 
ADORA2A               0.111   adenosine A2a receptor 
CNR2                  0.105   cannabinoid receptor 2 (macrophage) 
ADORA1                0.098   adenosine A1 receptor 
ADORA1                0.098   adenosine A1 receptor 
HTR1B                 0.097   5-hydroxytryptamine (serotonin) receptor 1B 
ADORA2B               0.094   adenosine A2b receptor 
ADRA1B                0.094   alpha-1B-adrenergic receptor 
ADRB2                 0.086   adrenergic, beta-2-, receptor, surface 
MC1R                  0.085   melanocortin 1 receptor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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