Guide to the Human Genome
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Name: S1PR3 Sequence: fasta or formatted (378aa) NCBI GI: 38788193
Description:

sphingosine-1-phosphate receptor 3

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         34           2
 C cysteine            3.7         14           1
 D aspartate           1.9          7           1
 E glutamate           2.6         10           1
 F phenylalanine       5.6         21           2
 G glycine             4.0         15           1
 H histidine           2.1          8           1
 I isoleucine          8.2         31           1
 K lysine              5.0         19           2
 L leucine            13.0         49           2
 M methionine          3.2         12           1
 N asparagine          5.6         21           2
 P proline             4.5         17           2
 Q glutamine           1.6          6           1
 R arginine            5.8         22           2
 S serine              8.7         33           4
 T threonine           4.2         16           2
 V valine              7.1         27           2
 W tryptophan          1.6          6           1
 Y tyrosine            2.6         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sphingosine-1-phosphate receptor 3 
S1PR1                 0.489   sphingosine-1-phosphate receptor 1 
S1PR2                 0.373   endothelial differentiation, sphingolipid G-protein...
S1PR5                 0.371   endothelial differentiation, sphingolipid G-protein-...
S1PR4                 0.307   sphingosine-1-phosphate receptor 4 precursor 
LPAR1                 0.273   lysophosphatidic acid receptor 1 
LPAR1                 0.273   lysophosphatidic acid receptor 1 
LPAR3                 0.247   lysophosphatidic acid receptor 3 
LPAR2                 0.233   lysophosphatidic acid receptor 2 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform b 
GPR12                 0.127   G protein-coupled receptor 12 
MC5R                  0.123   melanocortin 5 receptor 
GPR6                  0.122   G protein-coupled receptor 6 
MC4R                  0.114   melanocortin 4 receptor 
GPR3                  0.112   G protein-coupled receptor 3 
MC3R                  0.110   melanocortin 3 receptor 
CNR2                  0.105   cannabinoid receptor 2 (macrophage) 
MC2R                  0.101   melanocortin 2 receptor 
ADORA2A               0.097   adenosine A2a receptor 
ADORA3                0.093   adenosine A3 receptor isoform 2 
HTR4                  0.082   serotonin 5-HT4 receptor isoform n 
HTR4                  0.082   serotonin 5-HT4 receptor isoform i 
HTR4                  0.082   serotonin 5-HT4 receptor isoform d 
HTR4                  0.082   serotonin 5-HT4 receptor isoform a 
HTR4                  0.082   serotonin 5-HT4 receptor isoform g 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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