Guide to the Human Genome
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Name: S1PR5 Sequence: fasta or formatted (398aa) NCBI GI: 13540517
Description:

endothelial differentiation, sphingolipid G-protein-coupled receptor, 8

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.8         59           4
 C cysteine            3.5         14           2
 D aspartate           2.8         11           1
 E glutamate           2.0          8           1
 F phenylalanine       2.8         11           1
 G glycine             8.5         34           2
 H histidine           1.3          5           1
 I isoleucine          2.3          9           2
 K lysine              1.0          4           1
 L leucine            18.6         74           5
 M methionine          1.3          5           1
 N asparagine          2.0          8           1
 P proline             6.5         26           2
 Q glutamine           1.5          6           2
 R arginine            8.5         34           2
 S serine              8.0         32           2
 T threonine           4.8         19           2
 V valine              6.5         26           2
 W tryptophan          1.0          4           1
 Y tyrosine            2.3          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   endothelial differentiation, sphingolipid G-protein-... 
S1PR1                 0.392   sphingosine-1-phosphate receptor 1 
S1PR3                 0.358   sphingosine-1-phosphate receptor 3 
S1PR2                 0.337   endothelial differentiation, sphingolipid G-protein...
S1PR4                 0.291   sphingosine-1-phosphate receptor 4 precursor 
LPAR1                 0.225   lysophosphatidic acid receptor 1 
LPAR1                 0.225   lysophosphatidic acid receptor 1 
LPAR2                 0.217   lysophosphatidic acid receptor 2 
LPAR3                 0.197   lysophosphatidic acid receptor 3 
GPR3                  0.141   G protein-coupled receptor 3 
GPR12                 0.140   G protein-coupled receptor 12 
GPR6                  0.120   G protein-coupled receptor 6 
CNR1                  0.120   cannabinoid receptor 1 isoform a 
CNR1                  0.120   cannabinoid receptor 1 isoform a 
CNR1                  0.120   cannabinoid receptor 1 isoform a 
CNR1                  0.120   cannabinoid receptor 1 isoform a 
CNR1                  0.120   cannabinoid receptor 1 isoform a 
CNR1                  0.120   cannabinoid receptor 1 isoform b 
CNR2                  0.110   cannabinoid receptor 2 (macrophage) 
MC5R                  0.099   melanocortin 5 receptor 
MC4R                  0.096   melanocortin 4 receptor 
MC3R                  0.094   melanocortin 3 receptor 
HTR6                  0.079   5-hydroxytryptamine (serotonin) receptor 6 
ADRA1B                0.073   alpha-1B-adrenergic receptor 
MC2R                  0.071   melanocortin 2 receptor 
MC1R                  0.070   melanocortin 1 receptor 
ADRB1                 0.069   beta-1-adrenergic receptor 
ADORA2A               0.069   adenosine A2a receptor 
SSTR5                 0.062   somatostatin receptor 5 
ADRA1A                0.062   alpha-1A-adrenergic receptor isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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