Guide to the Human Genome
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Name: GPR12 Sequence: fasta or formatted (334aa) NCBI GI: 4885295
Description:

G protein-coupled receptor 12

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         34           4
 C cysteine            3.6         12           2
 D aspartate           2.7          9           1
 E glutamate           3.0         10           1
 F phenylalanine       3.9         13           1
 G glycine             3.6         12           1
 H histidine           2.1          7           2
 I isoleucine          8.4         28           2
 K lysine              1.8          6           1
 L leucine            14.4         48           2
 M methionine          2.7          9           1
 N asparagine          3.9         13           2
 P proline             4.5         15           1
 Q glutamine           2.4          8           1
 R arginine            3.6         12           1
 S serine              8.7         29           2
 T threonine           6.9         23           2
 V valine              7.8         26           2
 W tryptophan          1.2          4           1
 Y tyrosine            4.8         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 12 
GPR3                  0.565   G protein-coupled receptor 3 
GPR6                  0.564   G protein-coupled receptor 6 
S1PR5                 0.166   endothelial differentiation, sphingolipid G-protein-...
LPAR2                 0.160   lysophosphatidic acid receptor 2 
S1PR1                 0.155   sphingosine-1-phosphate receptor 1 
LPAR3                 0.155   lysophosphatidic acid receptor 3 
S1PR2                 0.155   endothelial differentiation, sphingolipid G-protein...
MC4R                  0.154   melanocortin 4 receptor 
MC3R                  0.154   melanocortin 3 receptor 
LPAR1                 0.149   lysophosphatidic acid receptor 1 
LPAR1                 0.149   lysophosphatidic acid receptor 1 
MC5R                  0.146   melanocortin 5 receptor 
S1PR3                 0.146   sphingosine-1-phosphate receptor 3 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform a 
CNR1                  0.141   cannabinoid receptor 1 isoform b 
CNR2                  0.137   cannabinoid receptor 2 (macrophage) 
MC1R                  0.130   melanocortin 1 receptor 
MC2R                  0.126   melanocortin 2 receptor 
ADORA3                0.118   adenosine A3 receptor isoform 2 
S1PR4                 0.111   sphingosine-1-phosphate receptor 4 precursor 
HTR4                  0.105   serotonin 5-HT4 receptor isoform n 
HTR4                  0.105   serotonin 5-HT4 receptor isoform i 
HTR4                  0.105   serotonin 5-HT4 receptor isoform d 
HTR4                  0.105   serotonin 5-HT4 receptor isoform a 
HTR4                  0.105   serotonin 5-HT4 receptor isoform g 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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