Guide to the Human Genome
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Name: LPAR3 Sequence: fasta or formatted (353aa) NCBI GI: 6912348
Description:

lysophosphatidic acid receptor 3

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         19           3
 C cysteine            3.4         12           2
 D aspartate           3.4         12           2
 E glutamate           1.7          6           1
 F phenylalanine       5.9         21           2
 G glycine             4.2         15           1
 H histidine           2.0          7           1
 I isoleucine          5.9         21           2
 K lysine              4.5         16           2
 L leucine            11.9         42           3
 M methionine          4.2         15           1
 N asparagine          5.4         19           1
 P proline             3.1         11           1
 Q glutamine           1.7          6           1
 R arginine            5.7         20           3
 S serine              8.8         31           2
 T threonine           6.8         24           1
 V valine              9.9         35           3
 W tryptophan          2.0          7           1
 Y tyrosine            4.0         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   lysophosphatidic acid receptor 3 
LPAR1                 0.497   lysophosphatidic acid receptor 1 
LPAR1                 0.497   lysophosphatidic acid receptor 1 
LPAR2                 0.443   lysophosphatidic acid receptor 2 
S1PR1                 0.262   sphingosine-1-phosphate receptor 1 
S1PR3                 0.261   sphingosine-1-phosphate receptor 3 
S1PR2                 0.233   endothelial differentiation, sphingolipid G-protein...
S1PR5                 0.216   endothelial differentiation, sphingolipid G-protein-...
S1PR4                 0.197   sphingosine-1-phosphate receptor 4 precursor 
GPR3                  0.154   G protein-coupled receptor 3 
CNR1                  0.151   cannabinoid receptor 1 isoform a 
CNR1                  0.151   cannabinoid receptor 1 isoform a 
CNR1                  0.151   cannabinoid receptor 1 isoform a 
CNR1                  0.151   cannabinoid receptor 1 isoform a 
CNR1                  0.151   cannabinoid receptor 1 isoform a 
CNR1                  0.151   cannabinoid receptor 1 isoform b 
GPR12                 0.143   G protein-coupled receptor 12 
GPR6                  0.136   G protein-coupled receptor 6 
MC5R                  0.132   melanocortin 5 receptor 
MC4R                  0.129   melanocortin 4 receptor 
MC3R                  0.113   melanocortin 3 receptor 
CNR2                  0.109   cannabinoid receptor 2 (macrophage) 
HTR1B                 0.103   5-hydroxytryptamine (serotonin) receptor 1B 
ADORA2B               0.093   adenosine A2b receptor 
ADORA2A               0.090   adenosine A2a receptor 
ADRA1B                0.084   alpha-1B-adrenergic receptor 
HTR4                  0.083   serotonin 5-HT4 receptor isoform b 
HTR4                  0.083   serotonin 5-HT4 receptor isoform n 
HTR4                  0.083   serotonin 5-HT4 receptor isoform i 
HTR4                  0.083   serotonin 5-HT4 receptor isoform d 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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