Guide to the Human Genome
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Name: S1PR4 Sequence: fasta or formatted (384aa) NCBI GI: 4503459
Description:

sphingosine-1-phosphate receptor 4 precursor

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.7         45           2
 C cysteine            3.6         14           2
 D aspartate           2.1          8           1
 E glutamate           2.6         10           1
 F phenylalanine       4.7         18           1
 G glycine             8.9         34           2
 H histidine           1.3          5           1
 I isoleucine          3.6         14           2
 K lysine              1.3          5           1
 L leucine            17.2         66           3
 M methionine          2.3          9           1
 N asparagine          2.3          9           1
 P proline             3.6         14           1
 Q glutamine           1.6          6           2
 R arginine            9.1         35           2
 S serine              9.1         35           2
 T threonine           4.2         16           2
 V valine              6.2         24           2
 W tryptophan          1.8          7           1
 Y tyrosine            2.6         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sphingosine-1-phosphate receptor 4 precursor 
S1PR3                 0.304   sphingosine-1-phosphate receptor 3 
S1PR5                 0.299   endothelial differentiation, sphingolipid G-protein-...
S1PR1                 0.298   sphingosine-1-phosphate receptor 1 
S1PR2                 0.245   endothelial differentiation, sphingolipid G-protein...
LPAR2                 0.212   lysophosphatidic acid receptor 2 
LPAR1                 0.196   lysophosphatidic acid receptor 1 
LPAR1                 0.196   lysophosphatidic acid receptor 1 
LPAR3                 0.185   lysophosphatidic acid receptor 3 
CNR1                  0.128   cannabinoid receptor 1 isoform a 
CNR1                  0.128   cannabinoid receptor 1 isoform a 
CNR1                  0.128   cannabinoid receptor 1 isoform a 
CNR1                  0.128   cannabinoid receptor 1 isoform a 
CNR1                  0.128   cannabinoid receptor 1 isoform a 
CNR1                  0.128   cannabinoid receptor 1 isoform b 
GPR3                  0.113   G protein-coupled receptor 3 
CNR2                  0.106   cannabinoid receptor 2 (macrophage) 
GPR12                 0.096   G protein-coupled receptor 12 
GPR6                  0.088   G protein-coupled receptor 6 
ADORA2A               0.077   adenosine A2a receptor 
MC5R                  0.076   melanocortin 5 receptor 
OPN3                  0.067   opsin 3 
RHO                   0.065   rhodopsin 
HTR4                  0.064   serotonin 5-HT4 receptor isoform n 
HTR4                  0.064   serotonin 5-HT4 receptor isoform i 
HTR4                  0.064   serotonin 5-HT4 receptor isoform d 
HTR4                  0.064   serotonin 5-HT4 receptor isoform a 
HTR4                  0.064   serotonin 5-HT4 receptor isoform g 
HTR4                  0.064   serotonin 5-HT4 receptor isoform b 
MC4R                  0.064   melanocortin 4 receptor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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