Guide to the Human Genome
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Name: CNR2 Sequence: fasta or formatted (360aa) NCBI GI: 4502929
Description:

cannabinoid receptor 2 (macrophage)

Referenced in:

G-Protein-coupled Receptors
Macrophages and Monocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         32           1
 C cysteine            3.6         13           2
 D aspartate           4.2         15           1
 E glutamate           3.1         11           2
 F phenylalanine       4.2         15           1
 G glycine             5.8         21           1
 H histidine           3.1         11           2
 I isoleucine          4.4         16           2
 K lysine              4.2         15           2
 L leucine            15.8         57           3
 M methionine          3.1         11           1
 N asparagine          1.9          7           1
 P proline             4.4         16           2
 Q glutamine           1.7          6           1
 R arginine            4.4         16           2
 S serine              9.4         34           2
 T threonine           4.7         17           2
 V valine              7.8         28           2
 W tryptophan          2.2          8           1
 Y tyrosine            3.1         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cannabinoid receptor 2 (macrophage) 
CNR1                  0.358   cannabinoid receptor 1 isoform a 
CNR1                  0.358   cannabinoid receptor 1 isoform a 
CNR1                  0.358   cannabinoid receptor 1 isoform a 
CNR1                  0.358   cannabinoid receptor 1 isoform a 
CNR1                  0.358   cannabinoid receptor 1 isoform a 
CNR1                  0.358   cannabinoid receptor 1 isoform b 
GPR12                 0.124   G protein-coupled receptor 12 
S1PR5                 0.118   endothelial differentiation, sphingolipid G-protein-...
S1PR2                 0.112   endothelial differentiation, sphingolipid G-protein...
LPAR1                 0.111   lysophosphatidic acid receptor 1 
LPAR1                 0.111   lysophosphatidic acid receptor 1 
S1PR4                 0.111   sphingosine-1-phosphate receptor 4 precursor 
S1PR3                 0.110   sphingosine-1-phosphate receptor 3 
GPR3                  0.110   G protein-coupled receptor 3 
S1PR1                 0.108   sphingosine-1-phosphate receptor 1 
GPR6                  0.108   G protein-coupled receptor 6 
LPAR3                 0.107   lysophosphatidic acid receptor 3 
LPAR2                 0.101   lysophosphatidic acid receptor 2 
ADORA2B               0.094   adenosine A2b receptor 
ADORA2A               0.092   adenosine A2a receptor 
MC5R                  0.088   melanocortin 5 receptor 
ADRB2                 0.081   adrenergic, beta-2-, receptor, surface 
MC4R                  0.080   melanocortin 4 receptor 
ADRA1B                0.078   alpha-1B-adrenergic receptor 
MC3R                  0.075   melanocortin 3 receptor 
HTR6                  0.073   5-hydroxytryptamine (serotonin) receptor 6 
ADRB1                 0.070   beta-1-adrenergic receptor 
MC1R                  0.070   melanocortin 1 receptor 
HTR1D                 0.067   5-hydroxytryptamine (serotonin) receptor 1D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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