Guide to the Human Genome
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Name: GPR6 Sequence: fasta or formatted (362aa) NCBI GI: 4885341
Description:

G protein-coupled receptor 6

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            15.2         55           5
 C cysteine            2.5          9           1
 D aspartate           1.7          6           1
 E glutamate           2.5          9           1
 F phenylalanine       3.6         13           2
 G glycine             8.0         29           3
 H histidine           2.5          9           1
 I isoleucine          3.3         12           2
 K lysine              0.6          2           1
 L leucine            15.5         56           3
 M methionine          1.4          5           1
 N asparagine          2.8         10           1
 P proline             5.5         20           2
 Q glutamine           2.8         10           2
 R arginine            3.9         14           2
 S serine              8.0         29           2
 T threonine           5.2         19           1
 V valine             10.2         37           4
 W tryptophan          1.9          7           1
 Y tyrosine            3.0         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 6 
GPR3                  0.529   G protein-coupled receptor 3 
GPR12                 0.520   G protein-coupled receptor 12 
LPAR2                 0.148   lysophosphatidic acid receptor 2 
S1PR2                 0.146   endothelial differentiation, sphingolipid G-protein...
LPAR3                 0.136   lysophosphatidic acid receptor 3 
S1PR5                 0.132   endothelial differentiation, sphingolipid G-protein-...
S1PR1                 0.129   sphingosine-1-phosphate receptor 1 
S1PR3                 0.129   sphingosine-1-phosphate receptor 3 
LPAR1                 0.117   lysophosphatidic acid receptor 1 
LPAR1                 0.117   lysophosphatidic acid receptor 1 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform b 
CNR2                  0.110   cannabinoid receptor 2 (macrophage) 
ADORA2B               0.109   adenosine A2b receptor 
MC1R                  0.106   melanocortin 1 receptor 
MC3R                  0.106   melanocortin 3 receptor 
HTR6                  0.104   5-hydroxytryptamine (serotonin) receptor 6 
MC4R                  0.103   melanocortin 4 receptor 
ADORA3                0.103   adenosine A3 receptor isoform 2 
S1PR4                 0.094   sphingosine-1-phosphate receptor 4 precursor 
MC5R                  0.093   melanocortin 5 receptor 
GPR119                0.090   G protein-coupled receptor 119 
ADORA1                0.086   adenosine A1 receptor 
ADORA1                0.086   adenosine A1 receptor 
HTR4                  0.086   serotonin 5-HT4 receptor isoform n 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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