Guide to the Human Genome
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Name: MC5R Sequence: fasta or formatted (325aa) NCBI GI: 5174535
Description:

melanocortin 5 receptor

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         26           2
 C cysteine            4.3         14           2
 D aspartate           2.8          9           1
 E glutamate           2.5          8           1
 F phenylalanine       7.1         23           2
 G glycine             4.0         13           1
 H histidine           3.4         11           2
 I isoleucine          8.9         29           2
 K lysine              2.5          8           1
 L leucine            12.0         39           2
 M methionine          5.8         19           1
 N asparagine          4.6         15           2
 P proline             2.5          8           1
 Q glutamine           1.2          4           1
 R arginine            4.9         16           2
 S serine              8.9         29           2
 T threonine           4.6         15           1
 V valine              7.7         25           2
 W tryptophan          0.9          3           1
 Y tyrosine            3.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   melanocortin 5 receptor 
MC3R                  0.587   melanocortin 3 receptor 
MC4R                  0.585   melanocortin 4 receptor 
MC2R                  0.408   melanocortin 2 receptor 
MC1R                  0.399   melanocortin 1 receptor 
LPAR1                 0.166   lysophosphatidic acid receptor 1 
LPAR1                 0.166   lysophosphatidic acid receptor 1 
GPR12                 0.148   G protein-coupled receptor 12 
S1PR1                 0.147   sphingosine-1-phosphate receptor 1 
LPAR3                 0.145   lysophosphatidic acid receptor 3 
S1PR3                 0.144   sphingosine-1-phosphate receptor 3 
LPAR2                 0.142   lysophosphatidic acid receptor 2 
GPR3                  0.140   G protein-coupled receptor 3 
ADORA2A               0.140   adenosine A2a receptor 
S1PR2                 0.129   endothelial differentiation, sphingolipid G-protein...
ADORA2B               0.124   adenosine A2b receptor 
ADRA1D                0.121   alpha-1D-adrenergic receptor 
S1PR5                 0.120   endothelial differentiation, sphingolipid G-protein-...
ADRA1B                0.120   alpha-1B-adrenergic receptor 
ADORA1                0.118   adenosine A1 receptor 
ADORA1                0.118   adenosine A1 receptor 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform a 
CNR1                  0.113   cannabinoid receptor 1 isoform b 
ADRA1A                0.110   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.110   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.110   alpha-1A-adrenergic receptor isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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