APAF1 25868

Name: APAF1	Sequence: fasta or formatted (338aa)		NCBI GI: 32483363
Description: apoptotic peptidase activating factor 1 isoform e		Referenced in: BCL2 Pathways, Caspases, and Programmed Cell Death WD Repeat Proteins
Other entries for this name: alt prot [1248aa] apoptotic peptidase activating factor 1 isoform c alt prot [1205aa] apoptotic peptidase activating factor 1 isoform d alt prot [1194aa] apoptotic peptidase activating factor 1 isoform b alt prot [1237aa] apoptotic peptidase activating factor 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.0 17 2 C cysteine 2.4 8 1 D aspartate 6.5 22 2 E glutamate 5.9 20 3 F phenylalanine 2.1 7 1 G glycine 6.2 21 2 H histidine 3.3 11 1 I isoleucine 5.3 18 2 K lysine 8.9 30 2 L leucine 12.4 42 2 M methionine 3.0 10 1 N asparagine 2.7 9 1 P proline 3.3 11 1 Q glutamine 4.4 15 3 R arginine 4.7 16 1 S serine 8.6 29 4 T threonine 3.6 12 2 V valine 8.3 28 2 W tryptophan 1.8 6 1 Y tyrosine 1.8 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apoptotic peptidase activating factor 1 isoform e [H... APAF1 0.933 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.933 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.888 apoptotic peptidase activating factor 1 isoform b [Ho... APAF1 0.888 apoptotic peptidase activating factor 1 isoform a [Ho... JAKMIP2 0.009 Janus kinase and microtubule interacting protein 2 [... SLFN5 0.008 schlafen family member 5 NVL 0.006 nuclear VCP-like isoform 2 NVL 0.006 nuclear VCP-like isoform 1 ABCC9 0.006 ATP-binding cassette, sub-family C, member 9 isofor... ABCC9 0.006 ATP-binding cassette, sub-family C, member 9 isofor... ABCC9 0.006 ATP-binding cassette, sub-family C, member 9 isofor... C6orf182 0.006 hypothetical protein LOC285753 C6orf182 0.006 hypothetical protein LOC285753 CARD8 0.005 caspase recruitment domain family, member 8 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.