Guide to the Human Genome
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Name: ANK1 Sequence: fasta or formatted (1880aa) NCBI GI: 70780357
Description:

ankyrin 1 isoform 3

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [156aa] ankyrin 1 isoform 10
alt prot [1897aa] ankyrin 1 isoform 9
alt prot [1856aa] ankyrin 1 isoform 4
alt prot [1719aa] ankyrin 1 isoform 2
alt prot [1881aa] ankyrin 1 isoform 1
alt prot [109aa] ankyrin 1 isoform 7
alt prot [155aa] ankyrin 1 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8        166           2
 C cysteine            1.1         21           1
 D aspartate           5.2         98           2
 E glutamate           7.7        144           3
 F phenylalanine       2.1         40           1
 G glycine             6.8        127           2
 H histidine           3.7         70           2
 I isoleucine          3.9         74           2
 K lysine              4.8         90           2
 L leucine            11.0        207           3
 M methionine          1.9         35           1
 N asparagine          4.6         87           2
 P proline             5.1         96           3
 Q glutamine           4.9         92           2
 R arginine            5.5        103           3
 S serine              7.0        131           2
 T threonine           6.0        113           3
 V valine              7.6        142           2
 W tryptophan          0.7         13           1
 Y tyrosine            1.6         31           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin 1 isoform 3 
ANK1                  0.985   ankyrin 1 isoform 1 
ANK1                  0.984   ankyrin 1 isoform 4 
ANK1                  0.977   ankyrin 1 isoform 9 
ANK1                  0.806   ankyrin 1 isoform 2 
ANK2                  0.469   ankyrin 2 isoform 2 
ANK2                  0.467   ankyrin 2 isoform 3 
ANK3                  0.464   ankyrin 3 isoform 1 
ANK2                  0.447   ankyrin 2 isoform 1 
ANK3                  0.203   ankyrin 3 isoform 2 
ANKRD28               0.083   ankyrin repeat domain 28 
ANKRD44               0.082   ankyrin repeat domain 44 
ANKRD50               0.078   ankyrin repeat domain 50 
ANKRD17               0.076   ankyrin repeat domain protein 17 isoform b 
ANKRD52               0.074   ankyrin repeat domain 52 
TNKS2                 0.073   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.073   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKK1                 0.057   ankyrin repeat and kinase domain containing 1 
ANKRD17               0.055   ankyrin repeat domain protein 17 isoform a 
ANKHD1                0.054   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.054   ANKHD1-EIF4EBP3 protein 
INVS                  0.047   inversin isoform a 
INVS                  0.047   inversin isoform b 
ANKFY1                0.046   ankyrin repeat and FYVE domain containing 1 isoform...
KIDINS220             0.046   kinase D-interacting substrate of 220 kDa 
RIPK4                 0.045   ankyrin repeat domain 3 
TRPA1                 0.044   ankyrin-like protein 1 
ANKHD1                0.042   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.042   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKRD27               0.039   ankyrin repeat domain 27 (VPS9 domain) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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