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Name: ANKHD1 Sequence: fasta or formatted (627aa) NCBI GI: 46519154
Description:

ankyrin repeat and KH domain containing 1 isoform 3

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [2542aa] ankyrin repeat and KH domain containing 1 isoform 1
alt prot [616aa] ankyrin repeat and KH domain containing 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.9         87           4
 C cysteine            2.1         13           2
 D aspartate           7.0         44           1
 E glutamate           9.4         59           2
 F phenylalanine       2.1         13           1
 G glycine            11.0         69           5
 H histidine           3.0         19           1
 I isoleucine          2.4         15           1
 K lysine              3.0         19           1
 L leucine            12.1         76           4
 M methionine          2.2         14           1
 N asparagine          3.5         22           1
 P proline             2.7         17           4
 Q glutamine           2.2         14           1
 R arginine            3.2         20           2
 S serine              6.5         41           2
 T threonine           6.1         38           2
 V valine              6.2         39           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.3          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and KH domain containing 1 isoform 3 ... 
ANKHD1                0.975   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.947   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.947   ANKHD1-EIF4EBP3 protein 
ANKRD17               0.740   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.740   ankyrin repeat domain protein 17 isoform b 
ANKRD50               0.143   ankyrin repeat domain 50 
ANK3                  0.133   ankyrin 3 isoform 1 
ANK1                  0.130   ankyrin 1 isoform 9 
ANK1                  0.130   ankyrin 1 isoform 1 
ANK1                  0.130   ankyrin 1 isoform 3 
ANK1                  0.130   ankyrin 1 isoform 2 
ANK1                  0.130   ankyrin 1 isoform 4 
ANK2                  0.123   ankyrin 2 isoform 3 
ANK2                  0.122   ankyrin 2 isoform 2 
ANK2                  0.122   ankyrin 2 isoform 1 
ANKRD28               0.119   ankyrin repeat domain 28 
ANKRD44               0.118   ankyrin repeat domain 44 
KIDINS220             0.118   kinase D-interacting substrate of 220 kDa 
RIPK4                 0.110   ankyrin repeat domain 3 
ANKK1                 0.107   ankyrin repeat and kinase domain containing 1 
TANC2                 0.102   tetratricopeptide repeat, ankyrin repeat and coiled...
ANKS6                 0.102   ankyrin repeat and sterile alpha motif domain contai...
ANKRD52               0.100   ankyrin repeat domain 52 
TNKS                  0.098   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TANC1                 0.097   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.097   tetratricopeptide repeat, ankyrin repeat and coiled...
TNKS2                 0.097   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ASB2                  0.095   ankyrin repeat and SOCS box-containing protein 2 [Ho...
DAPK1                 0.085   death-associated protein kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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