Guide to the Human Genome
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Name: ANKRD50 Sequence: fasta or formatted (1429aa) NCBI GI: 62988328
Description:

ankyrin repeat domain 50

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2        131           3
 C cysteine            2.4         34           2
 D aspartate           5.1         73           2
 E glutamate           5.9         85           2
 F phenylalanine       2.2         32           2
 G glycine             7.3        105           3
 H histidine           3.8         55           2
 I isoleucine          3.8         55           2
 K lysine              4.7         67           2
 L leucine            11.7        167           4
 M methionine          1.8         26           1
 N asparagine          4.7         67           2
 P proline             3.6         51           2
 Q glutamine           5.9         84           3
 R arginine            4.6         66           2
 S serine              8.7        125           2
 T threonine           5.0         71           2
 V valine              6.4         92           2
 W tryptophan          1.3         18           1
 Y tyrosine            1.7         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 50 
TANC2                 0.109   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.103   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.103   tetratricopeptide repeat, ankyrin repeat and coiled...
ANK1                  0.102   ankyrin 1 isoform 9 
ANK1                  0.102   ankyrin 1 isoform 1 
ANK1                  0.102   ankyrin 1 isoform 3 
ANK1                  0.102   ankyrin 1 isoform 2 
ANK1                  0.102   ankyrin 1 isoform 4 
ANK2                  0.100   ankyrin 2 isoform 3 
ANK2                  0.099   ankyrin 2 isoform 2 
ANK2                  0.099   ankyrin 2 isoform 1 
ANKRD44               0.098   ankyrin repeat domain 44 
ANK3                  0.097   ankyrin 3 isoform 1 
ANKRD28               0.094   ankyrin repeat domain 28 
ANKHD1                0.082   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.082   ANKHD1-EIF4EBP3 protein 
ANKRD17               0.081   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.081   ankyrin repeat domain protein 17 isoform b 
ANKRD52               0.077   ankyrin repeat domain 52 
KIDINS220             0.067   kinase D-interacting substrate of 220 kDa 
TNKS                  0.066   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS2                 0.066   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
INVS                  0.064   inversin isoform a 
INVS                  0.064   inversin isoform b 
ANKHD1                0.063   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.061   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKK1                 0.052   ankyrin repeat and kinase domain containing 1 
LOC441869             0.051   hypothetical protein LOC441869 
DAPK1                 0.049   death-associated protein kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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