Guide to the Human Genome
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Name: ANK1 Sequence: fasta or formatted (156aa) NCBI GI: 215598566
Description:

ankyrin 1 isoform 10

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [1897aa] ankyrin 1 isoform 9
alt prot [1856aa] ankyrin 1 isoform 4
alt prot [1719aa] ankyrin 1 isoform 2
alt prot [1880aa] ankyrin 1 isoform 3
alt prot [1881aa] ankyrin 1 isoform 1
alt prot [109aa] ankyrin 1 isoform 7
alt prot [155aa] ankyrin 1 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.9          3           2
 C cysteine            1.3          2           1
 D aspartate           6.4         10           2
 E glutamate          11.5         18           2
 F phenylalanine       5.1          8           2
 G glycine             4.5          7           1
 H histidine           3.8          6           1
 I isoleucine          5.8          9           2
 K lysine              5.1          8           2
 L leucine             9.6         15           2
 M methionine          1.9          3           1
 N asparagine          3.2          5           1
 P proline             3.2          5           1
 Q glutamine           5.8          9           1
 R arginine            4.5          7           3
 S serine              7.1         11           2
 T threonine           7.1         11           1
 V valine             10.9         17           2
 W tryptophan          0.6          1           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin 1 isoform 10 
ANK1                  0.777   ankyrin 1 isoform 5 
ANK1                  0.620   ankyrin 1 isoform 7 
ANK1                  0.512   ankyrin 1 isoform 1 
ANK1                  0.512   ankyrin 1 isoform 2 
ANK1                  0.289   ankyrin 1 isoform 3 
ANK1                  0.289   ankyrin 1 isoform 9 
ANK1                  0.289   ankyrin 1 isoform 4 
ANK2                  0.108   ankyrin 2 isoform 3 
ANK2                  0.108   ankyrin 2 isoform 2 
ANK2                  0.108   ankyrin 2 isoform 1 
DAXX                  0.017   death-domain associated protein isoform a 
DAXX                  0.017   death-domain associated protein isoform a 
DAXX                  0.017   death-domain associated protein isoform b 
MIA3                  0.017   melanoma inhibitory activity family, member 3 [Homo...
SMCR8                 0.014   Smith-Magenis syndrome chromosome region, candidate...
PBRM1                 0.014   polybromo 1 isoform 2 
CLEC12B               0.010   C-type lectin domain family 12, member B isoform 1 ...
CLEC12B               0.010   C-type lectin domain family 12, member B isoform 2 ...
XRCC4                 0.010   X-ray repair cross complementing protein 4 isoform 1...
XRCC4                 0.010   X-ray repair cross complementing protein 4 isoform 1 ...
XRCC4                 0.010   X-ray repair cross complementing protein 4 isoform 2...
SF3A3                 0.010   splicing factor 3a, subunit 3 
ANKRD12               0.010   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.010   ankyrin repeat domain 12 isoform 1 
RHPN1                 0.010   rhophilin 1 
PLEKHG6               0.007   pleckstrin homology domain-containing family G memb...
PLEKHG6               0.007   pleckstrin homology domain-containing family G memb...
PLEKHG6               0.007   pleckstrin homology domain-containing family G memb...
LOC100291610          0.007   PREDICTED: similar to KIAA1920 protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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